RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 OR51E1Q8TCB6 317 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 UFD1Q92890 307 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 CMBLQ96DG6 245 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 FAM71F1Q96KD3 344 aaPredicted RBP5.23□□□□□ -1.57
VIM-207ENST00000495528 OPALINQ96PE5 141 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 OR2V2Q96R30 315 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 TMED9Q9BVK6 235 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 MMP27Q9H306 513 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 CHMP1AQ9HD42 196 aaPredicted RBP5.23□□□□□ -1.57
VIM-207ENST00000495528 PTTG3PQ9NZH4 202 aa5.23□□□□□ -1.57
VIM-207ENST00000495528 VWFP04275 2813 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 IGLV5-45A0A087WSX0 123 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 A0A087WYN8 130 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 IGHV3-64DA0A0J9YX35 117 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 CLPSL1A2RUU4 121 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 GGT3PA6NGU5 568 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 H0YL77 283 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 CCRL2O00421 344 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 SYT7O43581 403 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 CYB5R3P00387 301 aaPredicted RBP5.22□□□□□ -1.57
VIM-207ENST00000495528 CRYBA1P05813 215 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 RPS2P15880 293 aaKnown RBP5.22□□□□□ -1.57
VIM-207ENST00000495528 SELEP16581 610 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 KITLGP21583 273 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 HOXA1P49639 335 aaPredicted RBP5.22□□□□□ -1.57
VIM-207ENST00000495528 TAS2R43P59537 309 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 RPS25P62851 125 aaKnown RBP5.22□□□□□ -1.57
VIM-207ENST00000495528 GNB2P62879 340 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 BDH1Q02338 343 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 ZNF92Q03936 586 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 INSL4Q14641 139 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 CDK5R1Q15078 307 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 ACSM3Q53FZ2 586 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 FAM201AQ5SY85 155 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 GPR107Q5VW38 600 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 CEACAM19Q7Z692 300 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 OR5AS1Q8N127 324 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 OR52H1Q8NGJ2 320 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 OR13C5Q8NGS8 318 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 OR10AC1Q8NH08 325 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 HAVCR2Q8TDQ0 301 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 APOBEC3DQ96AK3 386 aaPredicted RBP5.22□□□□□ -1.57
VIM-207ENST00000495528 FGGYQ96C11 551 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 HAVCR1Q96D42 359 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 YIPF6Q96EC8 236 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 REEP6Q96HR9 211 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 NUDT16L1Q9BRJ7 211 aaKnown RBP5.22□□□□□ -1.57
VIM-207ENST00000495528 TMEM246Q9BRR3 403 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 CHIAQ9BZP6 476 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 COMMD4Q9H0A8 199 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 MMP28Q9H239 520 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 OR51E2Q9H255 320 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 EXOSC4Q9NPD3 245 aaKnown RBP5.22□□□□□ -1.57
VIM-207ENST00000495528 GPR84Q9NQS5 396 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 MIOXQ9UGB7 285 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 NUFIP1Q9UHK0 495 aaKnown RBP5.22□□□□□ -1.57
VIM-207ENST00000495528 ATPIF1Q9UII2 106 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 HHLA2Q9UM44 414 aa5.22□□□□□ -1.57
VIM-207ENST00000495528 A0A0U1RQV5 110 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 LOC100506127A0A0U1RQW1 187 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 A0A1B0GVI7 797 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 CCDC160A6NGH7 325 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 TMEM212A6NML5 194 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 C15orf62A8K5M9 175 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 XRCC2O43543 280 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 AIREO43918 545 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 GPX5O75715 221 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 NDUFA7O95182 113 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 HLA-DPB1P04440 258 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 ISG15P05161 165 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 MELTFP08582 738 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 OCM2P0CE71 109 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 TUBG1P23258 451 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 CPT2P23786 658 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 GADD45AP24522 165 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 PSMA1P25786 263 aaKnown RBP5.21□□□□□ -1.58
VIM-207ENST00000495528 TGFBR2P37173 567 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 PMELP40967 661 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 FGF12P61328 243 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 RPS11P62280 158 aaKnown RBP eCLIP5.21□□□□□ -1.58
VIM-207ENST00000495528 SNRPEP62304 92 aaKnown RBP5.21□□□□□ -1.58
VIM-207ENST00000495528 LSM3P62310 102 aaKnown RBP5.21□□□□□ -1.58
VIM-207ENST00000495528 FAM3AP98173 230 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 FABP5Q01469 135 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 GK2Q14410 553 aaPredicted RBP5.21□□□□□ -1.58
VIM-207ENST00000495528 DMRTC1Q5HYR2 192 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 OR2T2Q6IF00 324 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 LYPD2Q6UXB3 125 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 UNQ9370/PRO34162Q6UXP9 181 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 ZNF841Q6ZN19 808 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 TMEM91Q6ZNR0 172 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 PGAP1Q75T13 922 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 MRPL21Q7Z2W9 205 aaKnown RBP5.21□□□□□ -1.58
VIM-207ENST00000495528 CLVS1Q8IUQ0 354 aaPredicted RBP5.21□□□□□ -1.58
VIM-207ENST00000495528 MS4A15Q8N5U1 240 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 OR10AD1Q8NGE0 317 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 OR51A4Q8NGJ6 313 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 OR13F1Q8NGS4 319 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 OR13C3Q8NGS6 347 aa5.21□□□□□ -1.58
VIM-207ENST00000495528 LINC01006Q8NI28 216 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms