RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 PGA5P0DJD9 388 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 LYL1P12980 280 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 ZNF44P15621 663 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 ERVK11-1P61568 191 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 TMEM187Q14656 261 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 Q6P435 159 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 CCDC71LQ8N9Z2 235 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 OR8G5Q8NG78 346 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 RASL12Q9NYN1 266 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 GSKIPQ9P0R6 139 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 NKX2-6A6NCS4 301 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 FAM90A27PA6NNH2 459 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 MLNRO43193 412 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 KCNAB3O43448 404 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 IFNA21P01568 189 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 RLN2P04090 185 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 GRPP07492 148 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 RRASP10301 218 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 RAB32Q13637 225 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 HERPUD1Q15011 391 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 IAH1Q2TAA2 248 aaPredicted RBP13.19□□□□□ -0.3
SHISA5-216ENST00000494854 SP6Q3SY56 376 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 C20orf204Q6ZNR8 217 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 ZNF295-AS1Q8N0V1 137 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 OR11L1Q8NGX0 322 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 NRIP2Q9BQI9 281 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 SUCNR1Q9BXA5 334 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 SLC25A15Q9Y619 301 aa13.19□□□□□ -0.3
SHISA5-216ENST00000494854 IGHV2OR16-5A0A0B4J2B6 119 aa13.18□□□□□ -0.3
SHISA5-216ENST00000494854 NMBP08949 121 aa13.18□□□□□ -0.3
SHISA5-216ENST00000494854 CTXN2P0C2S0 81 aa13.18□□□□□ -0.3
SHISA5-216ENST00000494854 PET100P0DJ07 73 aa13.18□□□□□ -0.3
SHISA5-216ENST00000494854 LUMP51884 338 aaPredicted RBP13.18□□□□□ -0.3
SHISA5-216ENST00000494854 GGNBP1Q5YKI7 109 aa13.18□□□□□ -0.3
SHISA5-216ENST00000494854 ZNF880Q6PDB4 577 aa13.18□□□□□ -0.3
SHISA5-216ENST00000494854 MEX3BQ6ZN04 569 aaKnown RBP13.18□□□□□ -0.3
SHISA5-216ENST00000494854 FAM169BQ8N8A8 192 aa13.18□□□□□ -0.3
SHISA5-216ENST00000494854 MRPL24Q96A35 216 aaKnown RBP13.18□□□□□ -0.3
SHISA5-216ENST00000494854 C14orf79Q96F83 325 aa13.18□□□□□ -0.3
SHISA5-216ENST00000494854 ARPC5LQ9BPX5 153 aa13.18□□□□□ -0.3
SHISA5-216ENST00000494854 ZNF471Q9BX82 626 aaPredicted RBP13.18□□□□□ -0.3
SHISA5-216ENST00000494854 OR5AC2Q9NZP5 309 aa13.18□□□□□ -0.3
SHISA5-216ENST00000494854 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.17□□□□□ -0.3
SHISA5-216ENST00000494854 NXPH2O95156 264 aa13.17□□□□□ -0.3
SHISA5-216ENST00000494854 KITLGP21583 273 aa13.17□□□□□ -0.3
SHISA5-216ENST00000494854 MDH2P40926 338 aaKnown RBP13.17□□□□□ -0.3
SHISA5-216ENST00000494854 ZNF718Q3SXZ3 478 aa13.17□□□□□ -0.3
SHISA5-216ENST00000494854 LIAT1Q6ZQX7 453 aa13.17□□□□□ -0.3
SHISA5-216ENST00000494854 LRTM2Q8N967 370 aa13.17□□□□□ -0.3
SHISA5-216ENST00000494854 RRNAD1Q96FB5 475 aaKnown RBP13.17□□□□□ -0.3
SHISA5-216ENST00000494854 MYO9AB2RTY4 2548 aa13.17□□□□□ -0.3
SHISA5-216ENST00000494854 FBN2P35556 2912 aa13.17□□□□□ -0.3
SHISA5-216ENST00000494854 IGKV1-6A0A0C4DH72 117 aa13.17□□□□□ -0.3
SHISA5-216ENST00000494854 IGHV3-64DA0A0J9YX35 117 aa13.17□□□□□ -0.3
SHISA5-216ENST00000494854 POM121CA8CG34 1229 aa13.17□□□□□ -0.3
SHISA5-216ENST00000494854 TIMM8AO60220 97 aaPredicted RBP13.17□□□□□ -0.3
SHISA5-216ENST00000494854 OR2H2O95918 312 aa13.17□□□□□ -0.3
SHISA5-216ENST00000494854 GNRHRP30968 328 aa13.17□□□□□ -0.3
SHISA5-216ENST00000494854 S100A10P60903 97 aa13.17□□□□□ -0.3
SHISA5-216ENST00000494854 ZNF146Q15072 292 aa13.17□□□□□ -0.3
SHISA5-216ENST00000494854 PAN3Q58A45 887 aaKnown RBP13.17□□□□□ -0.3
SHISA5-216ENST00000494854 ZNF474Q6S9Z5 364 aaPredicted RBP13.17□□□□□ -0.3
SHISA5-216ENST00000494854 DMRTC2Q8IXT2 367 aaPredicted RBP13.17□□□□□ -0.3
SHISA5-216ENST00000494854 C1orf174Q8IYL3 243 aa13.17□□□□□ -0.3
SHISA5-216ENST00000494854 FAM185AQ8N0U4 392 aa13.17□□□□□ -0.3
SHISA5-216ENST00000494854 FZR1Q9UM11 496 aa13.17□□□□□ -0.3
SHISA5-216ENST00000494854 TACC2O95359 2948 aa13.16□□□□□ -0.3
SHISA5-216ENST00000494854 F5H0A9 414 aaPredicted RBP13.16□□□□□ -0.3
SHISA5-216ENST00000494854 SIRPB1O00241 398 aa13.16□□□□□ -0.3
SHISA5-216ENST00000494854 SLC33A1O00400 549 aaPredicted RBP13.16□□□□□ -0.3
SHISA5-216ENST00000494854 TUSC2O75896 110 aa13.16□□□□□ -0.3
SHISA5-216ENST00000494854 ACAA1P09110 424 aaPredicted RBP13.16□□□□□ -0.3
SHISA5-216ENST00000494854 GCH1P30793 250 aa13.16□□□□□ -0.3
SHISA5-216ENST00000494854 NUP62P37198 522 aaPredicted RBP13.16□□□□□ -0.3
SHISA5-216ENST00000494854 KCNJ3P48549 501 aa13.16□□□□□ -0.3
SHISA5-216ENST00000494854 FABP6P51161 128 aa13.16□□□□□ -0.3
SHISA5-216ENST00000494854 HLA-DRB3P79483 266 aa13.16□□□□□ -0.3
SHISA5-216ENST00000494854 FBXL19-AS1Q494R0 122 aa13.16□□□□□ -0.3
SHISA5-216ENST00000494854 MBNL2Q5VZF2 373 aaKnown RBP13.16□□□□□ -0.3
SHISA5-216ENST00000494854 FAM219AQ8IW50 185 aa13.16□□□□□ -0.3
SHISA5-216ENST00000494854 ZNF565Q8N9K5 539 aa13.16□□□□□ -0.3
SHISA5-216ENST00000494854 GLYATL2Q8WU03 294 aa13.16□□□□□ -0.3
SHISA5-216ENST00000494854 SECTM1Q8WVN6 248 aa13.16□□□□□ -0.3
SHISA5-216ENST00000494854 MSI2Q96DH6 328 aaKnown RBP13.16□□□□□ -0.3
SHISA5-216ENST00000494854 CXXC4Q9H2H0 198 aa13.16□□□□□ -0.3
SHISA5-216ENST00000494854 TREM2Q9NZC2 230 aa13.16□□□□□ -0.3
SHISA5-216ENST00000494854 ANKHD1Q8IWZ3 2542 aaKnown RBP13.16□□□□□ -0.3
SHISA5-216ENST00000494854 MPPED1O15442 326 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 PHF1O43189 567 aaPredicted RBP13.15□□□□□ -0.3
SHISA5-216ENST00000494854 RCC1P18754 421 aaPredicted RBP13.15□□□□□ -0.3
SHISA5-216ENST00000494854 SPIN3Q5JUX0 258 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 TIMM23BQ5SRD1 257 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 SHEQ5VZ18 495 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 RGS7BPQ6MZT1 257 aaPredicted RBP13.15□□□□□ -0.3
SHISA5-216ENST00000494854 LGI3Q8N145 548 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 OR4A4PQ8NGN8 299 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 OR1S1Q8NH92 325 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 S100PBPQ96BU1 408 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 C18orf12Q96KH6 178 aa13.15□□□□□ -0.3
SHISA5-216ENST00000494854 CXorf58Q96LI9 332 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms