RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 LINC00574Q9H8X3 128 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 PCDHB16Q9NRJ7 776 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 MBNL3Q9NUK0 354 aaKnown RBP7.11□□□□□ -1.27
ITGB1-217ENST00000494395 GHRLQ9UBU3 117 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 KIF25Q9UIL4 384 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 SESN1Q9Y6P5 492 aa7.11□□□□□ -1.27
ITGB1-217ENST00000494395 A0A087X0M5 115 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 TRGV10A0A0A0MS01 117 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 IGHV2-26A0A0B4J1V2 119 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 A0A1B0GX30 115 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 TRDV1A0A1B0GX56 115 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 MEIOCA2RUB1 952 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 ZNF729A6NN14 1252 aaPredicted RBP7.1□□□□□ -1.27
ITGB1-217ENST00000494395 TMEM14DPA8MWL7 114 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 CCRL2O00421 344 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 SLC17A2O00624 439 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 RRP9O43818 475 aaKnown RBP7.1□□□□□ -1.27
ITGB1-217ENST00000494395 ARL6IP5O75915 188 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 UBBP0CG47 229 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 HKR1P10072 659 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 COX7A1P24310 79 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 CFPP27918 469 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 UNC119Q13432 240 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 UTF1Q5T230 341 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 PRAMEF5Q5TYX0 476 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 SLC35E4Q6ICL7 350 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 C16orf87Q6PH81 154 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 LHFPL4Q7Z7J7 247 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 DYNAPQ8N1N2 210 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 BEND2Q8NDZ0 799 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 OR6M1Q8NGM8 313 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 OR13D1Q8NGV5 346 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 KIRREL1Q96J84 757 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 CHIAQ9BZP6 476 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 TMEM133Q9H2Q1 129 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 GAL3ST2Q9H3Q3 398 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 OR6C3Q9NZP0 311 aa7.1□□□□□ -1.27
ITGB1-217ENST00000494395 TBL2Q9Y4P3 447 aaKnown RBP7.1□□□□□ -1.27
ITGB1-217ENST00000494395 A0A0A6YYD4 124 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 TRAV1-2A0A0B4J238 106 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 KBTBD11-OT1A0A1B0GTJ5 212 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 NPIPB11E5RHQ5 1161 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 ZNF561-AS1K7EIQ3 104 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 LDLRAD4O15165 306 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 CRTAPO75718 401 aaPredicted RBP7.09□□□□□ -1.27
ITGB1-217ENST00000494395 IL1AP01583 271 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 IGLV1-47P01700 117 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 CDK2P24941 298 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 PAX6P26367 422 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 CALRP27797 417 aaKnown RBP7.09□□□□□ -1.27
ITGB1-217ENST00000494395 PSMB9P28065 219 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 CHATP28329 748 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 HTR2CP28335 458 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 FGF9P31371 208 aaPredicted RBP7.09□□□□□ -1.27
ITGB1-217ENST00000494395 GLP1RP43220 463 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 RPL15P61313 204 aaKnown RBP7.09□□□□□ -1.27
ITGB1-217ENST00000494395 RPS27AP62979 156 aaKnown RBP7.09□□□□□ -1.27
ITGB1-217ENST00000494395 ACTG1P63261 375 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 AANATQ16613 207 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 SYT6Q5T7P8 510 aaPredicted RBP7.09□□□□□ -1.27
ITGB1-217ENST00000494395 OR10K2Q6IF99 312 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 ZNF497Q6ZNH5 498 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 TRAPPC6BQ86SZ2 158 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 NR2C2APQ86WQ0 139 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 OR4P4Q8NGL7 312 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 PIFOQ8TCI5 191 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 TAF15Q92804 592 aaKnown RBP eCLIP7.09□□□□□ -1.27
ITGB1-217ENST00000494395 FAM46BQ96A09 425 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 TM2D1Q9BX74 207 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 BARHL1Q9BZE3 327 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 SELENOIQ9C0D9 397 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 SLITRK2Q9H156 845 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 SPACA1Q9HBV2 294 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 ING3Q9NXR8 418 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 CALYQ9NYX4 217 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 FAM96BQ9Y3D0 163 aa7.09□□□□□ -1.27
ITGB1-217ENST00000494395 AK6Q9Y3D8 172 aaKnown RBP7.09□□□□□ -1.27
ITGB1-217ENST00000494395 STAB1Q9NY15 2570 aa7.09□□□□□ -1.28
ITGB1-217ENST00000494395 MEIKINA0A087WXM9 373 aa7.08□□□□□ -1.28
ITGB1-217ENST00000494395 TRAV39A0A0B4J263 110 aa7.08□□□□□ -1.28
ITGB1-217ENST00000494395 TRIM64CA6NLI5 447 aa7.08□□□□□ -1.28
ITGB1-217ENST00000494395 FOXI3A8MTJ6 420 aaPredicted RBP7.08□□□□□ -1.28
ITGB1-217ENST00000494395 VGLL3A8MV65 326 aa7.08□□□□□ -1.28
ITGB1-217ENST00000494395 C15orf65H3BRN8 121 aa7.08□□□□□ -1.28
ITGB1-217ENST00000494395 GPR137BO60478 399 aa7.08□□□□□ -1.28
ITGB1-217ENST00000494395 PDCD6O75340 191 aa7.08□□□□□ -1.28
ITGB1-217ENST00000494395 MPIG6BO95866 241 aa7.08□□□□□ -1.28
ITGB1-217ENST00000494395 MT-ND4P03905 459 aa7.08□□□□□ -1.28
ITGB1-217ENST00000494395 AMY2AP04746 511 aa7.08□□□□□ -1.28
ITGB1-217ENST00000494395 ARG1P05089 322 aa7.08□□□□□ -1.28
ITGB1-217ENST00000494395 GLAP06280 429 aa7.08□□□□□ -1.28
ITGB1-217ENST00000494395 FUT3P21217 361 aa7.08□□□□□ -1.28
ITGB1-217ENST00000494395 OMGP23515 440 aa7.08□□□□□ -1.28
ITGB1-217ENST00000494395 AWAT1Q58HT5 328 aa7.08□□□□□ -1.28
ITGB1-217ENST00000494395 ATAD3CQ5T2N8 411 aa7.08□□□□□ -1.28
ITGB1-217ENST00000494395 MINOS1Q5TGZ0 78 aa7.08□□□□□ -1.28
ITGB1-217ENST00000494395 OR52W1Q6IF63 320 aa7.08□□□□□ -1.28
ITGB1-217ENST00000494395 RAB12Q6IQ22 244 aa7.08□□□□□ -1.28
ITGB1-217ENST00000494395 OR2W3Q7Z3T1 314 aa7.08□□□□□ -1.28
ITGB1-217ENST00000494395 RTN4RL2Q86UN3 420 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms