RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 VSIG8P0DPA2 414 aa11.81□□□□□ -0.52
ATG4B-224ENST00000494132 CPEP16870 476 aa11.81□□□□□ -0.52
ATG4B-224ENST00000494132 PRRX1P54821 245 aa11.81□□□□□ -0.52
ATG4B-224ENST00000494132 FABP5Q01469 135 aa11.81□□□□□ -0.52
ATG4B-224ENST00000494132 PAX5Q02548 391 aa11.81□□□□□ -0.52
ATG4B-224ENST00000494132 DIAPH2-AS1Q14236 149 aa11.81□□□□□ -0.52
ATG4B-224ENST00000494132 TPTE2P1Q5T6R2 138 aa11.81□□□□□ -0.52
ATG4B-224ENST00000494132 ZNF497Q6ZNH5 498 aa11.81□□□□□ -0.52
ATG4B-224ENST00000494132 Q6ZS46 218 aa11.81□□□□□ -0.52
ATG4B-224ENST00000494132 C5orf24Q7Z6I8 188 aa11.81□□□□□ -0.52
ATG4B-224ENST00000494132 OR9G1Q8NH87 305 aa11.81□□□□□ -0.52
ATG4B-224ENST00000494132 PHYHIPQ92561 330 aa11.81□□□□□ -0.52
ATG4B-224ENST00000494132 ARL11Q969Q4 196 aa11.81□□□□□ -0.52
ATG4B-224ENST00000494132 NICN1Q9BSH3 213 aa11.81□□□□□ -0.52
ATG4B-224ENST00000494132 NPFFR1Q9GZQ6 430 aa11.81□□□□□ -0.52
ATG4B-224ENST00000494132 MMP28Q9H239 520 aa11.81□□□□□ -0.52
ATG4B-224ENST00000494132 NCOR1P1Q9H4R4 102 aa11.81□□□□□ -0.52
ATG4B-224ENST00000494132 RAB18Q9NP72 206 aa11.81□□□□□ -0.52
ATG4B-224ENST00000494132 FBLN5Q9UBX5 448 aa11.81□□□□□ -0.52
ATG4B-224ENST00000494132 BLOC1S6Q9UL45 172 aa11.81□□□□□ -0.52
ATG4B-224ENST00000494132 PSG11Q9UQ72 335 aa11.81□□□□□ -0.52
ATG4B-224ENST00000494132 AK6Q9Y3D8 172 aaKnown RBP11.81□□□□□ -0.52
ATG4B-224ENST00000494132 C15orf65H3BRN8 121 aa11.8□□□□□ -0.52
ATG4B-224ENST00000494132 J3QR06 171 aa11.8□□□□□ -0.52
ATG4B-224ENST00000494132 MT-ND4P03905 459 aa11.8□□□□□ -0.52
ATG4B-224ENST00000494132 HTR2CP28335 458 aa11.8□□□□□ -0.52
ATG4B-224ENST00000494132 EFNB2P52799 333 aa11.8□□□□□ -0.52
ATG4B-224ENST00000494132 P2RY14Q15391 338 aa11.8□□□□□ -0.52
ATG4B-224ENST00000494132 TBCEQ15813 527 aaPredicted RBP11.8□□□□□ -0.52
ATG4B-224ENST00000494132 SSX1Q16384 188 aa11.8□□□□□ -0.52
ATG4B-224ENST00000494132 TMEM95Q3KNT9 176 aa11.8□□□□□ -0.52
ATG4B-224ENST00000494132 C1orf100Q5SVJ3 147 aa11.8□□□□□ -0.52
ATG4B-224ENST00000494132 SYT6Q5T7P8 510 aaPredicted RBP11.8□□□□□ -0.52
ATG4B-224ENST00000494132 LIAT1Q6ZQX7 453 aa11.8□□□□□ -0.52
ATG4B-224ENST00000494132 PRR18Q8N4B5 295 aa11.8□□□□□ -0.52
ATG4B-224ENST00000494132 OR2T6Q8NHC8 308 aa11.8□□□□□ -0.52
ATG4B-224ENST00000494132 MRPS24Q96EL2 167 aaKnown RBP11.8□□□□□ -0.52
ATG4B-224ENST00000494132 CST11Q9H112 138 aa11.8□□□□□ -0.52
ATG4B-224ENST00000494132 ZNF696Q9H7X3 374 aa11.8□□□□□ -0.52
ATG4B-224ENST00000494132 ZNF702PQ9H963 129 aa11.8□□□□□ -0.52
ATG4B-224ENST00000494132 ISYNA1Q9NPH2 558 aa11.8□□□□□ -0.52
ATG4B-224ENST00000494132 ACOT13Q9NPJ3 140 aa11.8□□□□□ -0.52
ATG4B-224ENST00000494132 SH2D7A6NKC9 451 aaPredicted RBP11.79□□□□□ -0.52
ATG4B-224ENST00000494132 LY6LH3BQJ8 138 aa11.79□□□□□ -0.52
ATG4B-224ENST00000494132 SDCBPO00560 298 aaPredicted RBP11.79□□□□□ -0.52
ATG4B-224ENST00000494132 VSIG10L2P0DP72 767 aa11.79□□□□□ -0.52
ATG4B-224ENST00000494132 RCC1P18754 421 aaPredicted RBP11.79□□□□□ -0.52
ATG4B-224ENST00000494132 CALRP27797 417 aaKnown RBP11.79□□□□□ -0.52
ATG4B-224ENST00000494132 KIR2DS4P43632 304 aa11.79□□□□□ -0.52
ATG4B-224ENST00000494132 DYNLT3P51808 116 aa11.79□□□□□ -0.52
ATG4B-224ENST00000494132 CLDN12P56749 244 aa11.79□□□□□ -0.52
ATG4B-224ENST00000494132 BLCAPP62952 87 aa11.79□□□□□ -0.52
ATG4B-224ENST00000494132 UNC119Q13432 240 aa11.79□□□□□ -0.52
ATG4B-224ENST00000494132 PRR31Q5SQ13 230 aa11.79□□□□□ -0.52
ATG4B-224ENST00000494132 ZNF367Q7RTV3 350 aa11.79□□□□□ -0.52
ATG4B-224ENST00000494132 KLHDC1Q8N7A1 406 aa11.79□□□□□ -0.52
ATG4B-224ENST00000494132 TOMM40LQ969M1 308 aa11.79□□□□□ -0.52
ATG4B-224ENST00000494132 RPEQ96AT9 228 aa11.79□□□□□ -0.52
ATG4B-224ENST00000494132 TMEM59Q9BXS4 323 aa11.79□□□□□ -0.52
ATG4B-224ENST00000494132 RANBP3Q9H6Z4 567 aaPredicted RBP11.79□□□□□ -0.52
ATG4B-224ENST00000494132 PLGRKTQ9HBL7 147 aa11.79□□□□□ -0.52
ATG4B-224ENST00000494132 SPACA1Q9HBV2 294 aa11.79□□□□□ -0.52
ATG4B-224ENST00000494132 PITPNC1Q9UKF7 332 aa11.79□□□□□ -0.52
ATG4B-224ENST00000494132 TRAPPC2LQ9UL33 140 aa11.79□□□□□ -0.52
ATG4B-224ENST00000494132 MGAM2Q2M2H8 2515 aa11.79□□□□□ -0.52
ATG4B-224ENST00000494132 FAM90A10PA6NDY2 464 aa11.78□□□□□ -0.52
ATG4B-224ENST00000494132 FAM90A18PA6NE21 464 aa11.78□□□□□ -0.52
ATG4B-224ENST00000494132 FAM90A16PA6NEW6 464 aa11.78□□□□□ -0.52
ATG4B-224ENST00000494132 FAM90A20PA6NIJ5 464 aa11.78□□□□□ -0.52
ATG4B-224ENST00000494132 FAM90A7PA6NKC0 464 aa11.78□□□□□ -0.52
ATG4B-224ENST00000494132 FAM90A22PA8MWA6 464 aa11.78□□□□□ -0.52
ATG4B-224ENST00000494132 FAM90A12PA8MX19 464 aa11.78□□□□□ -0.52
ATG4B-224ENST00000494132 FAM90A5PA8MXJ8 464 aa11.78□□□□□ -0.52
ATG4B-224ENST00000494132 FAM90A23PA8MXZ1 464 aa11.78□□□□□ -0.52
ATG4B-224ENST00000494132 C12orf77C9JDV5 145 aa11.78□□□□□ -0.52
ATG4B-224ENST00000494132 FAM90A15PP0C7V4 464 aa11.78□□□□□ -0.52
ATG4B-224ENST00000494132 FAM90A13PP0C7W8 464 aa11.78□□□□□ -0.52
ATG4B-224ENST00000494132 FAM90A14PP0C7W9 464 aa11.78□□□□□ -0.52
ATG4B-224ENST00000494132 FAM90A24PP0C7X0 464 aa11.78□□□□□ -0.52
ATG4B-224ENST00000494132 GZMHP20718 246 aa11.78□□□□□ -0.52
ATG4B-224ENST00000494132 FUT3P21217 361 aa11.78□□□□□ -0.52
ATG4B-224ENST00000494132 BRS3P32247 399 aa11.78□□□□□ -0.52
ATG4B-224ENST00000494132 CEACAM3P40198 252 aa11.78□□□□□ -0.52
ATG4B-224ENST00000494132 RPS27AP62979 156 aaKnown RBP11.78□□□□□ -0.52
ATG4B-224ENST00000494132 EMX1Q04741 257 aaPredicted RBP11.78□□□□□ -0.52
ATG4B-224ENST00000494132 TRAM1Q15629 374 aa11.78□□□□□ -0.52
ATG4B-224ENST00000494132 OR10V1Q8NGI7 309 aa11.78□□□□□ -0.52
ATG4B-224ENST00000494132 OR1L1Q8NH94 360 aa11.78□□□□□ -0.52
ATG4B-224ENST00000494132 SULT4A1Q9BR01 284 aa11.78□□□□□ -0.52
ATG4B-224ENST00000494132 LINC00574Q9H8X3 128 aa11.78□□□□□ -0.52
ATG4B-224ENST00000494132 GFOD1Q9NXC2 390 aa11.78□□□□□ -0.52
ATG4B-224ENST00000494132 RRP15Q9Y3B9 282 aaKnown RBP11.78□□□□□ -0.52
ATG4B-224ENST00000494132 A0A0A6YYD4 124 aa11.77□□□□□ -0.53
ATG4B-224ENST00000494132 SLC22A1O15245 554 aa11.77□□□□□ -0.53
ATG4B-224ENST00000494132 SLC31A2O15432 143 aa11.77□□□□□ -0.53
ATG4B-224ENST00000494132 PDCD6O75340 191 aa11.77□□□□□ -0.53
ATG4B-224ENST00000494132 UBBP0CG47 229 aa11.77□□□□□ -0.53
ATG4B-224ENST00000494132 PSMA1P25786 263 aaKnown RBP11.77□□□□□ -0.53
ATG4B-224ENST00000494132 REG1BP48304 166 aa11.77□□□□□ -0.53
ATG4B-224ENST00000494132 LOXL3P58215 753 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms