RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 FOXRED2Q8IWF2 684 aa9.9□□□□□ -0.82
COL6A1-205ENST00000492851 DRAM1Q8N682 238 aa9.9□□□□□ -0.82
COL6A1-205ENST00000492851 OR10K1Q8NGX5 313 aa9.9□□□□□ -0.82
COL6A1-205ENST00000492851 RFESDQ8TAC1 157 aa9.9□□□□□ -0.82
COL6A1-205ENST00000492851 THRSPQ92748 146 aa9.9□□□□□ -0.82
COL6A1-205ENST00000492851 DPF1Q92782 380 aa9.9□□□□□ -0.82
COL6A1-205ENST00000492851 GHSRQ92847 366 aa9.9□□□□□ -0.82
COL6A1-205ENST00000492851 MCRIP2Q9BUT9 160 aaKnown RBP9.9□□□□□ -0.82
COL6A1-205ENST00000492851 AURKAIP1Q9NWT8 199 aaPredicted RBP9.9□□□□□ -0.82
COL6A1-205ENST00000492851 DSCAML1Q8TD84 2053 aa9.9□□□□□ -0.82
COL6A1-205ENST00000492851 A0A1W2PPI3 338 aa9.89□□□□□ -0.83
COL6A1-205ENST00000492851 SERPINE3A8MV23 424 aa9.89□□□□□ -0.83
COL6A1-205ENST00000492851 MCRIP1C9JLW8 97 aa9.89□□□□□ -0.83
COL6A1-205ENST00000492851 GEMIN2O14893 280 aaKnown RBP9.89□□□□□ -0.83
COL6A1-205ENST00000492851 TXNL1O43396 289 aa9.89□□□□□ -0.83
COL6A1-205ENST00000492851 PRB2P02812 416 aaPredicted RBP9.89□□□□□ -0.83
COL6A1-205ENST00000492851 TAS2R43P59537 309 aa9.89□□□□□ -0.83
COL6A1-205ENST00000492851 EBI3Q14213 229 aa9.89□□□□□ -0.83
COL6A1-205ENST00000492851 SMN1Q16637 294 aaKnown RBP9.89□□□□□ -0.83
COL6A1-205ENST00000492851 LTC4SQ16873 150 aa9.89□□□□□ -0.83
COL6A1-205ENST00000492851 Q499Y3 187 aa9.89□□□□□ -0.83
COL6A1-205ENST00000492851 ATAD3CQ5T2N8 411 aa9.89□□□□□ -0.83
COL6A1-205ENST00000492851 TRAT1Q6PIZ9 186 aa9.89□□□□□ -0.83
COL6A1-205ENST00000492851 LINC00311Q8N616 119 aa9.89□□□□□ -0.83
COL6A1-205ENST00000492851 PACRGLQ8N7B6 248 aa9.89□□□□□ -0.83
COL6A1-205ENST00000492851 C5orf56Q8N8D9 126 aa9.89□□□□□ -0.83
COL6A1-205ENST00000492851 OR8H1Q8NGG4 311 aa9.89□□□□□ -0.83
COL6A1-205ENST00000492851 PLPPR1Q8TBJ4 325 aa9.89□□□□□ -0.83
COL6A1-205ENST00000492851 NEK7Q8TDX7 302 aa9.89□□□□□ -0.83
COL6A1-205ENST00000492851 RGP1Q92546 391 aaPredicted RBP9.89□□□□□ -0.83
COL6A1-205ENST00000492851 ARL11Q969Q4 196 aa9.89□□□□□ -0.83
COL6A1-205ENST00000492851 TRBV5-5A0A0J9YX44 114 aa9.88□□□□□ -0.83
COL6A1-205ENST00000492851 SDCBPO00560 298 aaPredicted RBP9.88□□□□□ -0.83
COL6A1-205ENST00000492851 HSD17B6O14756 317 aa9.88□□□□□ -0.83
COL6A1-205ENST00000492851 SPINT2O43291 252 aa9.88□□□□□ -0.83
COL6A1-205ENST00000492851 CA11O75493 328 aa9.88□□□□□ -0.83
COL6A1-205ENST00000492851 IGKV1D-33P01593 117 aa9.88□□□□□ -0.83
COL6A1-205ENST00000492851 IGKV1-33P01594 117 aa9.88□□□□□ -0.83
COL6A1-205ENST00000492851 IGHV3-7P01780 117 aa9.88□□□□□ -0.83
COL6A1-205ENST00000492851 IGHG2P01859 326 aa9.88□□□□□ -0.83
COL6A1-205ENST00000492851 MT-ND4P03905 459 aa9.88□□□□□ -0.83
COL6A1-205ENST00000492851 GLAP06280 429 aa9.88□□□□□ -0.83
COL6A1-205ENST00000492851 IGFBP3P17936 291 aaPredicted RBP9.88□□□□□ -0.83
COL6A1-205ENST00000492851 SERPINA2P20848 420 aa9.88□□□□□ -0.83
COL6A1-205ENST00000492851 SSTR5P35346 364 aa9.88□□□□□ -0.83
COL6A1-205ENST00000492851 GNG10P50151 68 aa9.88□□□□□ -0.83
COL6A1-205ENST00000492851 GP2P55259 537 aaKnown RBP9.88□□□□□ -0.83
COL6A1-205ENST00000492851 C6orf183Q5T699 404 aa9.88□□□□□ -0.83
COL6A1-205ENST00000492851 OR2G6Q5TZ20 316 aa9.88□□□□□ -0.83
COL6A1-205ENST00000492851 STEAP3Q658P3 488 aa9.88□□□□□ -0.83
COL6A1-205ENST00000492851 DMKNQ6E0U4 476 aaPredicted RBP9.88□□□□□ -0.83
COL6A1-205ENST00000492851 SLC35E3Q7Z769 313 aa9.88□□□□□ -0.83
COL6A1-205ENST00000492851 MOB3BQ86TA1 216 aa9.88□□□□□ -0.83
COL6A1-205ENST00000492851 TGIF2LXQ8IUE1 241 aa9.88□□□□□ -0.83
COL6A1-205ENST00000492851 OR2T10Q8NGZ9 312 aa9.88□□□□□ -0.83
COL6A1-205ENST00000492851 LEAP2Q969E1 77 aa9.88□□□□□ -0.83
COL6A1-205ENST00000492851 ZNF184Q99676 751 aaPredicted RBP9.88□□□□□ -0.83
COL6A1-205ENST00000492851 PRKDCP78527 4128 aaKnown RBP9.87□□□□□ -0.83
COL6A1-205ENST00000492851 IGHV1-3A0A0C4DH29 117 aa9.87□□□□□ -0.83
COL6A1-205ENST00000492851 FAM90A10PA6NDY2 464 aa9.87□□□□□ -0.83
COL6A1-205ENST00000492851 EFCAB10A6NFE3 127 aa9.87□□□□□ -0.83
COL6A1-205ENST00000492851 FAM90A7PA6NKC0 464 aa9.87□□□□□ -0.83
COL6A1-205ENST00000492851 NCBP2LA6PVI3 153 aaKnown RBP9.87□□□□□ -0.83
COL6A1-205ENST00000492851 FAM90A23PA8MXZ1 464 aa9.87□□□□□ -0.83
COL6A1-205ENST00000492851 C15orf65H3BRN8 121 aa9.87□□□□□ -0.83
COL6A1-205ENST00000492851 PLXNB1O43157 2135 aa9.87□□□□□ -0.83
COL6A1-205ENST00000492851 CD1BP29016 333 aa9.87□□□□□ -0.83
COL6A1-205ENST00000492851 MYCNOSP40205 109 aa9.87□□□□□ -0.83
COL6A1-205ENST00000492851 DCTN2Q13561 401 aaKnown RBP9.87□□□□□ -0.83
COL6A1-205ENST00000492851 HNF4GQ14541 408 aa9.87□□□□□ -0.83
COL6A1-205ENST00000492851 SLC22A6Q4U2R8 563 aa9.87□□□□□ -0.83
COL6A1-205ENST00000492851 XAF1Q6GPH4 301 aa9.87□□□□□ -0.83
COL6A1-205ENST00000492851 TEX38Q6PEX7 206 aa9.87□□□□□ -0.83
COL6A1-205ENST00000492851 ZNF497Q6ZNH5 498 aa9.87□□□□□ -0.83
COL6A1-205ENST00000492851 IZUMO1Q8IYV9 350 aa9.87□□□□□ -0.83
COL6A1-205ENST00000492851 DHRSXQ8N5I4 330 aa9.87□□□□□ -0.83
COL6A1-205ENST00000492851 LIN7CQ9NUP9 197 aaKnown RBP9.87□□□□□ -0.83
COL6A1-205ENST00000492851 GFOD1Q9NXC2 390 aa9.87□□□□□ -0.83
COL6A1-205ENST00000492851 GHRLQ9UBU3 117 aa9.87□□□□□ -0.83
COL6A1-205ENST00000492851 TRAPPC2LQ9UL33 140 aa9.87□□□□□ -0.83
COL6A1-205ENST00000492851 SH2D7A6NKC9 451 aaPredicted RBP9.86□□□□□ -0.83
COL6A1-205ENST00000492851 AIPO00170 330 aa9.86□□□□□ -0.83
COL6A1-205ENST00000492851 AP4M1O00189 453 aa9.86□□□□□ -0.83
COL6A1-205ENST00000492851 RRP9O43818 475 aaKnown RBP9.86□□□□□ -0.83
COL6A1-205ENST00000492851 CD1AP06126 327 aa9.86□□□□□ -0.83
COL6A1-205ENST00000492851 FSTP19883 344 aa9.86□□□□□ -0.83
COL6A1-205ENST00000492851 CAPGP40121 348 aa9.86□□□□□ -0.83
COL6A1-205ENST00000492851 RPL23AP62750 156 aaKnown RBP9.86□□□□□ -0.83
COL6A1-205ENST00000492851 ST3GAL4Q11206 333 aa9.86□□□□□ -0.83
COL6A1-205ENST00000492851 DOC2BQ14184 412 aa9.86□□□□□ -0.83
COL6A1-205ENST00000492851 UTF1Q5T230 341 aa9.86□□□□□ -0.83
COL6A1-205ENST00000492851 GLIPR1L1Q6UWM5 242 aa9.86□□□□□ -0.83
COL6A1-205ENST00000492851 UNQ9370/PRO34162Q6UXP9 181 aa9.86□□□□□ -0.83
COL6A1-205ENST00000492851 ZNF554Q86TJ5 538 aa9.86□□□□□ -0.83
COL6A1-205ENST00000492851 ZNF329Q86UD4 541 aa9.86□□□□□ -0.83
COL6A1-205ENST00000492851 LINC00482Q8N8I6 264 aa9.86□□□□□ -0.83
COL6A1-205ENST00000492851 CCDC107Q8WV48 283 aa9.86□□□□□ -0.83
COL6A1-205ENST00000492851 CYGBQ8WWM9 190 aa9.86□□□□□ -0.83
COL6A1-205ENST00000492851 EAF1Q96JC9 268 aaPredicted RBP9.86□□□□□ -0.83
COL6A1-205ENST00000492851 CNOT2Q9NZN8 540 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms