RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 TREML4Q6UXN2 200 aa19.81■□□□□ 0.76
UPF3A-209ENST00000492270 ZNF497Q6ZNH5 498 aa19.81■□□□□ 0.76
UPF3A-209ENST00000492270 TMEM91Q6ZNR0 172 aa19.81■□□□□ 0.76
UPF3A-209ENST00000492270 OR2T6Q8NHC8 308 aa19.81■□□□□ 0.76
UPF3A-209ENST00000492270 PHYHIPQ92561 330 aa19.81■□□□□ 0.76
UPF3A-209ENST00000492270 MMP28Q9H239 520 aa19.81■□□□□ 0.76
UPF3A-209ENST00000492270 KCNK15Q9H427 330 aa19.81■□□□□ 0.76
UPF3A-209ENST00000492270 ISYNA1Q9NPH2 558 aa19.81■□□□□ 0.76
UPF3A-209ENST00000492270 RAB26Q9ULW5 256 aa19.81■□□□□ 0.76
UPF3A-209ENST00000492270 PSG11Q9UQ72 335 aa19.81■□□□□ 0.76
UPF3A-209ENST00000492270 WNK1Q9H4A3 2382 aa19.81■□□□□ 0.76
UPF3A-209ENST00000492270 J3QR06 171 aa19.8■□□□□ 0.76
UPF3A-209ENST00000492270 MT-ND4P03905 459 aa19.8■□□□□ 0.76
UPF3A-209ENST00000492270 SRMP19623 302 aa19.8■□□□□ 0.76
UPF3A-209ENST00000492270 MLLT11Q13015 90 aaPredicted RBP19.8■□□□□ 0.76
UPF3A-209ENST00000492270 SIGIRRQ6IA17 410 aa19.8■□□□□ 0.76
UPF3A-209ENST00000492270 OR10K2Q6IF99 312 aa19.8■□□□□ 0.76
UPF3A-209ENST00000492270 FAM53AQ6NSI3 398 aaPredicted RBP19.8■□□□□ 0.76
UPF3A-209ENST00000492270 SPACA1Q9HBV2 294 aa19.8■□□□□ 0.76
UPF3A-209ENST00000492270 A0A1W2PPE3 182 aa19.79■□□□□ 0.76
UPF3A-209ENST00000492270 MCRIP1C9JLW8 97 aa19.79■□□□□ 0.76
UPF3A-209ENST00000492270 C15orf65H3BRN8 121 aa19.79■□□□□ 0.76
UPF3A-209ENST00000492270 AIPO00170 330 aa19.79■□□□□ 0.76
UPF3A-209ENST00000492270 CPEP16870 476 aa19.79■□□□□ 0.76
UPF3A-209ENST00000492270 CEACAM3P40198 252 aa19.79■□□□□ 0.76
UPF3A-209ENST00000492270 C1orf100Q5SVJ3 147 aa19.79■□□□□ 0.76
UPF3A-209ENST00000492270 GLT8D1Q68CQ7 371 aa19.79■□□□□ 0.76
UPF3A-209ENST00000492270 Q6ZS46 218 aa19.79■□□□□ 0.76
UPF3A-209ENST00000492270 KLHDC1Q8N7A1 406 aa19.79■□□□□ 0.76
UPF3A-209ENST00000492270 ARL11Q969Q4 196 aa19.79■□□□□ 0.76
UPF3A-209ENST00000492270 MGLLQ99685 303 aa19.79■□□□□ 0.76
UPF3A-209ENST00000492270 ETAA1Q9NY74 926 aa19.79■□□□□ 0.76
UPF3A-209ENST00000492270 PEX16Q9Y5Y5 336 aa19.79■□□□□ 0.76
UPF3A-209ENST00000492270 FAM90A10PA6NDY2 464 aa19.78■□□□□ 0.76
UPF3A-209ENST00000492270 FAM90A18PA6NE21 464 aa19.78■□□□□ 0.76
UPF3A-209ENST00000492270 FAM90A16PA6NEW6 464 aa19.78■□□□□ 0.76
UPF3A-209ENST00000492270 FAM90A20PA6NIJ5 464 aa19.78■□□□□ 0.76
UPF3A-209ENST00000492270 FAM90A7PA6NKC0 464 aa19.78■□□□□ 0.76
UPF3A-209ENST00000492270 FAM90A12PA8MX19 464 aa19.78■□□□□ 0.76
UPF3A-209ENST00000492270 FAM90A5PA8MXJ8 464 aa19.78■□□□□ 0.76
UPF3A-209ENST00000492270 FAM90A23PA8MXZ1 464 aa19.78■□□□□ 0.76
UPF3A-209ENST00000492270 MPIG6BO95866 241 aa19.78■□□□□ 0.76
UPF3A-209ENST00000492270 FAM90A15PP0C7V4 464 aa19.78■□□□□ 0.76
UPF3A-209ENST00000492270 FAM90A13PP0C7W8 464 aa19.78■□□□□ 0.76
UPF3A-209ENST00000492270 FAM90A14PP0C7W9 464 aa19.78■□□□□ 0.76
UPF3A-209ENST00000492270 FAM90A24PP0C7X0 464 aa19.78■□□□□ 0.76
UPF3A-209ENST00000492270 OR10A7Q8NGE5 316 aa19.78■□□□□ 0.76
UPF3A-209ENST00000492270 OR4K15Q8NH41 348 aa19.78■□□□□ 0.76
UPF3A-209ENST00000492270 CREB3L1Q96BA8 519 aa19.78■□□□□ 0.76
UPF3A-209ENST00000492270 GFI1Q99684 422 aa19.78■□□□□ 0.76
UPF3A-209ENST00000492270 CST11Q9H112 138 aa19.78■□□□□ 0.76
UPF3A-209ENST00000492270 SERTAD4Q9NUC0 356 aa19.78■□□□□ 0.76
UPF3A-209ENST00000492270 GHRLQ9UBU3 117 aa19.78■□□□□ 0.76
UPF3A-209ENST00000492270 UBE2QL1A1L167 161 aa19.77■□□□□ 0.76
UPF3A-209ENST00000492270 TIMM23O14925 209 aa19.77■□□□□ 0.76
UPF3A-209ENST00000492270 VSIG8P0DPA2 414 aa19.77■□□□□ 0.76
UPF3A-209ENST00000492270 GZMHP20718 246 aa19.77■□□□□ 0.76
UPF3A-209ENST00000492270 BRS3P32247 399 aa19.77■□□□□ 0.76
UPF3A-209ENST00000492270 BLCAPP62952 87 aa19.77■□□□□ 0.76
UPF3A-209ENST00000492270 DIAPH2-AS1Q14236 149 aa19.77■□□□□ 0.76
UPF3A-209ENST00000492270 TBCEQ15813 527 aaPredicted RBP19.77■□□□□ 0.76
UPF3A-209ENST00000492270 Q8N2B8 174 aa19.77■□□□□ 0.76
UPF3A-209ENST00000492270 TOMM40LQ969M1 308 aa19.77■□□□□ 0.76
UPF3A-209ENST00000492270 IGHV3-43A0A0B4J1X8 118 aa19.76■□□□□ 0.75
UPF3A-209ENST00000492270 M0QZ24 198 aa19.76■□□□□ 0.75
UPF3A-209ENST00000492270 UBBP0CG47 229 aa19.76■□□□□ 0.75
UPF3A-209ENST00000492270 IGHV3-43DP0DP04 118 aa19.76■□□□□ 0.75
UPF3A-209ENST00000492270 VSIG10L2P0DP72 767 aa19.76■□□□□ 0.75
UPF3A-209ENST00000492270 FUT3P21217 361 aa19.76■□□□□ 0.75
UPF3A-209ENST00000492270 HTR2CP28335 458 aa19.76■□□□□ 0.75
UPF3A-209ENST00000492270 FABP5Q01469 135 aa19.76■□□□□ 0.75
UPF3A-209ENST00000492270 TMEM95Q3KNT9 176 aa19.76■□□□□ 0.75
UPF3A-209ENST00000492270 SYT6Q5T7P8 510 aaPredicted RBP19.76■□□□□ 0.75
UPF3A-209ENST00000492270 C11orf44Q8N8P7 122 aa19.76■□□□□ 0.75
UPF3A-209ENST00000492270 BLOC1S6Q9UL45 172 aa19.76■□□□□ 0.75
UPF3A-209ENST00000492270 AMMECR1Q9Y4X0 333 aaPredicted RBP19.76■□□□□ 0.75
UPF3A-209ENST00000492270 C12orf77C9JDV5 145 aa19.75■□□□□ 0.75
UPF3A-209ENST00000492270 SDCBPO00560 298 aaPredicted RBP19.75■□□□□ 0.75
UPF3A-209ENST00000492270 SLC22A1O15245 554 aa19.75■□□□□ 0.75
UPF3A-209ENST00000492270 ORC5O43913 435 aa19.75■□□□□ 0.75
UPF3A-209ENST00000492270 PDCD6O75340 191 aa19.75■□□□□ 0.75
UPF3A-209ENST00000492270 CD37P11049 281 aa19.75■□□□□ 0.75
UPF3A-209ENST00000492270 ARHGDIBP52566 201 aa19.75■□□□□ 0.75
UPF3A-209ENST00000492270 UNC119Q13432 240 aa19.75■□□□□ 0.75
UPF3A-209ENST00000492270 HERPUD1Q15011 391 aa19.75■□□□□ 0.75
UPF3A-209ENST00000492270 TRAM1Q15629 374 aa19.75■□□□□ 0.75
UPF3A-209ENST00000492270 GAPTQ8N292 157 aa19.75■□□□□ 0.75
UPF3A-209ENST00000492270 RPEQ96AT9 228 aa19.75■□□□□ 0.75
UPF3A-209ENST00000492270 NICN1Q9BSH3 213 aa19.75■□□□□ 0.75
UPF3A-209ENST00000492270 PRSS22Q9GZN4 317 aa19.75■□□□□ 0.75
UPF3A-209ENST00000492270 TRAPPC2LQ9UL33 140 aa19.75■□□□□ 0.75
UPF3A-209ENST00000492270 A0A1W2PPI3 338 aa19.74■□□□□ 0.75
UPF3A-209ENST00000492270 OOSP1A8MZH6 123 aa19.74■□□□□ 0.75
UPF3A-209ENST00000492270 TSPAN15O95858 294 aa19.74■□□□□ 0.75
UPF3A-209ENST00000492270 RCC1P18754 421 aaPredicted RBP19.74■□□□□ 0.75
UPF3A-209ENST00000492270 LOXL3P58215 753 aa19.74■□□□□ 0.75
UPF3A-209ENST00000492270 RPS27AP62979 156 aaKnown RBP19.74■□□□□ 0.75
UPF3A-209ENST00000492270 SSX1Q16384 188 aa19.74■□□□□ 0.75
UPF3A-209ENST00000492270 NKAPLQ5M9Q1 402 aa19.74■□□□□ 0.75
UPF3A-209ENST00000492270 C11orf88Q6PI97 169 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms