RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 OGG1O15527 345 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 GLAP06280 429 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 SNRNP70P08621 437 aaKnown RBP6.96□□□□□ -1.3
NUP50-217ENST00000491860 JUNBP17275 347 aaPredicted RBP6.96□□□□□ -1.3
NUP50-217ENST00000491860 FSTP19883 344 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 CD24P25063 80 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 GDNFP39905 211 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 SOX2P48431 317 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 PIGYQ3MUY2 71 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 Q499Y3 187 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 C6orf183Q5T699 404 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 FOXB2Q5VYV0 432 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 BAIAP2L2Q6UXY1 529 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 TGIF2LXQ8IUE1 241 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 IZUMO1Q8IYV9 350 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 PACRGLQ8N7B6 248 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 C5orf56Q8N8D9 126 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 SUMF2Q8NBJ7 301 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 OR8H1Q8NGG4 311 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 OR56B4Q8NH76 319 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 MRGPRDQ8TDS7 321 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 APH1BQ8WW43 257 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 SLC29A1Q99808 456 aa6.96□□□□□ -1.3
NUP50-217ENST00000491860 AURKAIP1Q9NWT8 199 aaPredicted RBP6.96□□□□□ -1.3
NUP50-217ENST00000491860 SERPINE3A8MV23 424 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 MCRIP1C9JLW8 97 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 SDCBPO00560 298 aaPredicted RBP6.95□□□□□ -1.3
NUP50-217ENST00000491860 SPINT2O43291 252 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 RRP9O43818 475 aaKnown RBP6.95□□□□□ -1.3
NUP50-217ENST00000491860 WBP4O75554 376 aaKnown RBP6.95□□□□□ -1.3
NUP50-217ENST00000491860 BAG2O95816 211 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 IGHG2P01859 326 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 AMY1AP04745 511 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 AMY2AP04746 511 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 CD1AP06126 327 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 SERPINA2P20848 420 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 MAPK3P27361 379 aaPredicted RBP6.95□□□□□ -1.3
NUP50-217ENST00000491860 CD1BP29016 333 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 GNG10P50151 68 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 GTF2A1P52655 376 aaPredicted RBP6.95□□□□□ -1.3
NUP50-217ENST00000491860 EBI3Q14213 229 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 ATAD3CQ5T2N8 411 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 STEAP3Q658P3 488 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 UNQ9370/PRO34162Q6UXP9 181 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 RNF144BQ7Z419 303 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 SLC35E3Q7Z769 313 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 ZNF554Q86TJ5 538 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 DRAM1Q8N682 238 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 NKAIN3Q8N8D7 197 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 OR2T10Q8NGZ9 312 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 PLPPR1Q8TBJ4 325 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 NEK7Q8TDX7 302 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 ARL11Q969Q4 196 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 TMEM80Q96HE8 168 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 ZNF184Q99676 751 aaPredicted RBP6.95□□□□□ -1.3
NUP50-217ENST00000491860 CHCHD6Q9BRQ6 235 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 LIN7CQ9NUP9 197 aaKnown RBP6.95□□□□□ -1.3
NUP50-217ENST00000491860 CNOT2Q9NZN8 540 aaKnown RBP6.95□□□□□ -1.3
NUP50-217ENST00000491860 GHRLQ9UBU3 117 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 AASSQ9UDR5 926 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 LRRC42Q9Y546 428 aa6.95□□□□□ -1.3
NUP50-217ENST00000491860 IGHV1-3A0A0C4DH29 117 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 TRBV5-5A0A0J9YX44 114 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 EFCAB10A6NFE3 127 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 AIPO00170 330 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 AP4M1O00189 453 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 GEMIN2O14893 280 aaKnown RBP6.94□□□□□ -1.3
NUP50-217ENST00000491860 CDRT1O95170 752 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 IGKV1D-33P01593 117 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 IGKV1-33P01594 117 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 OR5H8P0DN80 308 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 IGLL1P15814 213 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 IGFBP3P17936 291 aaPredicted RBP6.94□□□□□ -1.3
NUP50-217ENST00000491860 SSTR5P35346 364 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 MYCNOSP40205 109 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 ETV1P50549 477 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 RPL23AP62750 156 aaKnown RBP6.94□□□□□ -1.3
NUP50-217ENST00000491860 LTC4SQ16873 150 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 SLC22A6Q4U2R8 563 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 TCTEX1D4Q5JR98 221 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 DMKNQ6E0U4 476 aaPredicted RBP6.94□□□□□ -1.3
NUP50-217ENST00000491860 TEX38Q6PEX7 206 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 ZNF497Q6ZNH5 498 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 MOB3BQ86TA1 216 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 DHRSXQ8N5I4 330 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 OR10K1Q8NGX5 313 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 RFESDQ8TAC1 157 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 RGP1Q92546 391 aaPredicted RBP6.94□□□□□ -1.3
NUP50-217ENST00000491860 GHSRQ92847 366 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 GFOD1Q9NXC2 390 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 ZNF580Q9UK33 172 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 TRAPPC2LQ9UL33 140 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 SIRT4Q9Y6E7 314 aaPredicted RBP6.94□□□□□ -1.3
NUP50-217ENST00000491860 COL7A1Q02388 2944 aa6.94□□□□□ -1.3
NUP50-217ENST00000491860 NCBP2LA6PVI3 153 aaKnown RBP6.93□□□□□ -1.3
NUP50-217ENST00000491860 NUDT19A8MXV4 375 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 C15orf65H3BRN8 121 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 MOSP00540 346 aa6.93□□□□□ -1.3
NUP50-217ENST00000491860 PRB2P02812 416 aaPredicted RBP6.93□□□□□ -1.3
NUP50-217ENST00000491860 MT-ND4P03905 459 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms