RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 SLC25A29Q8N8R3 303 aa2.79□□□□□ -1.96
VPS26A-206ENST00000489794 ANP32BQ92688 251 aaKnown RBP2.79□□□□□ -1.96
VPS26A-206ENST00000489794 SMIM12Q96EX1 92 aa2.79□□□□□ -1.96
VPS26A-206ENST00000489794 OR2A7Q96R45 310 aa2.79□□□□□ -1.96
VPS26A-206ENST00000489794 MRPS26Q9BYN8 205 aaKnown RBP2.79□□□□□ -1.96
VPS26A-206ENST00000489794 TBL1XR1Q9BZK7 514 aa2.79□□□□□ -1.96
VPS26A-206ENST00000489794 BABAM2Q9NXR7 383 aa2.79□□□□□ -1.96
VPS26A-206ENST00000489794 TAS2R5Q9NYW4 299 aa2.79□□□□□ -1.96
VPS26A-206ENST00000489794 GUCA1BQ9UMX6 200 aa2.79□□□□□ -1.96
VPS26A-206ENST00000489794 MYO15BQ96JP2 1530 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 TRAV8-3A0A0A6YYJ7 113 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 TGOLN2O43493 480 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 CA2P00918 260 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 CALB1P05937 261 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 C8orf88P0DMB2 117 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 MLNP12872 115 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 PRTN3P24158 256 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 RPS12P25398 132 aaKnown RBP2.78□□□□□ -1.96
VPS26A-206ENST00000489794 CBX5P45973 191 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 AP2S1P53680 142 aaPredicted RBP2.78□□□□□ -1.96
VPS26A-206ENST00000489794 MGAT3Q09327 533 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 FAM53BQ14153 422 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 SSX1Q16384 188 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 UBE2NLQ5JXB2 153 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 TMEM31Q5JXX7 168 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 CLLU1OSQ5K130 101 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 FAM162BQ5T6X4 162 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 LINC00596Q86U02 117 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 ITPRIPQ8IWB1 547 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 CPNE9Q8IYJ1 553 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 C10orf67Q8IYJ2 551 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 LRRC34Q8IZ02 419 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 HS3ST5Q8IZT8 346 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 KRT222Q8N1A0 295 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 STK40Q8N2I9 435 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 MUC15Q8N387 334 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 OR52E4Q8NGH9 312 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 OR4P4Q8NGL7 312 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 PIGXQ8TBF5 258 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 CASTOR1Q8WTX7 329 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 PPCDCQ96CD2 204 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 ZNF649Q9BS31 505 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 ZNF436Q9C0F3 470 aaPredicted RBP2.78□□□□□ -1.96
VPS26A-206ENST00000489794 DERL2Q9GZP9 239 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 OR51V1Q9H2C8 321 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 MS4A6AQ9H2W1 248 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 ZNF706Q9Y5V0 76 aaPredicted RBP2.78□□□□□ -1.96
VPS26A-206ENST00000489794 SNX10Q9Y5X0 201 aa2.78□□□□□ -1.96
VPS26A-206ENST00000489794 HIVEP2P31629 2446 aa2.78□□□□□ -1.97
VPS26A-206ENST00000489794 ABCC11Q96J66 1382 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 MYBPHLA2RUH7 354 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 VGLL3A8MV65 326 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 GYG2O15488 501 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 COX7A2P2O60397 106 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 STX10O60499 249 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 CNMDO75829 334 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 CECR9P0C854 216 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 PYCR1P32322 319 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 TGFBR1P36897 503 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 CLEC12BQ2HXU8 276 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 SP6Q3SY56 376 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 SPIN4Q56A73 249 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 NXNL2Q5VZ03 156 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 CST9Q5W186 159 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 ZNF773Q6PK81 442 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 PDPNQ86YL7 162 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 CCDC112Q8NEF3 446 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 OR8K1Q8NGG5 319 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 TWIST2Q8WVJ9 160 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 TESCQ96BS2 214 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 CCDC42Q96M95 316 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 ANAPC13Q9BS18 74 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 ULBP1Q9BZM6 244 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 SLC22A4Q9H015 551 aa2.77□□□□□ -1.97
VPS26A-206ENST00000489794 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.77□□□□□ -1.97
VPS26A-206ENST00000489794 LOXHD1Q8IVV2 1947 aa2.76□□□□□ -1.97
VPS26A-206ENST00000489794 DNMT1P26358 1616 aaKnown RBP2.76□□□□□ -1.97
VPS26A-206ENST00000489794 SDK2Q58EX2 2172 aa2.76□□□□□ -1.97
VPS26A-206ENST00000489794 IGHV2-26A0A0B4J1V2 119 aa2.76□□□□□ -1.97
VPS26A-206ENST00000489794 TMEM72A0PK05 275 aa2.76□□□□□ -1.97
VPS26A-206ENST00000489794 TMEM114B3SHH9 223 aa2.76□□□□□ -1.97
VPS26A-206ENST00000489794 M0R036 132 aa2.76□□□□□ -1.97
VPS26A-206ENST00000489794 EPPINO95925 133 aa2.76□□□□□ -1.97
VPS26A-206ENST00000489794 IGKV1-39P01597 117 aa2.76□□□□□ -1.97
VPS26A-206ENST00000489794 IGKV1D-39P04432 117 aa2.76□□□□□ -1.97
VPS26A-206ENST00000489794 SOD3P08294 240 aa2.76□□□□□ -1.97
VPS26A-206ENST00000489794 SEC11BP0C7V7 166 aa2.76□□□□□ -1.97
VPS26A-206ENST00000489794 CD99P14209 185 aa2.76□□□□□ -1.97
VPS26A-206ENST00000489794 CD34P28906 385 aa2.76□□□□□ -1.97
VPS26A-206ENST00000489794 IMPA1P29218 277 aa2.76□□□□□ -1.97
VPS26A-206ENST00000489794 CMC4P56277 68 aaPredicted RBP2.76□□□□□ -1.97
VPS26A-206ENST00000489794 AP3S2P59780 193 aa2.76□□□□□ -1.97
VPS26A-206ENST00000489794 ELOCQ15369 112 aa2.76□□□□□ -1.97
VPS26A-206ENST00000489794 LRRC26Q2I0M4 334 aa2.76□□□□□ -1.97
VPS26A-206ENST00000489794 ACSM3Q53FZ2 586 aa2.76□□□□□ -1.97
VPS26A-206ENST00000489794 LPCAT4Q643R3 524 aa2.76□□□□□ -1.97
VPS26A-206ENST00000489794 CD200R1LQ6Q8B3 271 aa2.76□□□□□ -1.97
VPS26A-206ENST00000489794 LRRN1Q6UXK5 716 aa2.76□□□□□ -1.97
VPS26A-206ENST00000489794 CLEC20AQ6ZU45 233 aa2.76□□□□□ -1.97
VPS26A-206ENST00000489794 OLIG3Q7RTU3 272 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms