RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 C4orf36Q96KX1 117 aa14.9□□□□□ -0.02
GGPS1-206ENST00000488594 PLSCR3Q9NRY6 295 aa14.9□□□□□ -0.02
GGPS1-206ENST00000488594 ZNF580Q9UK33 172 aa14.9□□□□□ -0.02
GGPS1-206ENST00000488594 AP4S1Q9Y587 144 aa14.9□□□□□ -0.02
GGPS1-206ENST00000488594 OR5H8P0DN80 308 aa14.89□□□□□ -0.03
GGPS1-206ENST00000488594 SLC25A30Q5SVS4 291 aa14.89□□□□□ -0.03
GGPS1-206ENST00000488594 AMIGO2Q86SJ2 522 aa14.89□□□□□ -0.03
GGPS1-206ENST00000488594 TMEM104Q8NE00 496 aa14.89□□□□□ -0.03
GGPS1-206ENST00000488594 TNFAIP8L1Q8WVP5 186 aa14.89□□□□□ -0.03
GGPS1-206ENST00000488594 S1PR3Q99500 378 aa14.89□□□□□ -0.03
GGPS1-206ENST00000488594 GPER1Q99527 375 aa14.89□□□□□ -0.03
GGPS1-206ENST00000488594 DPCDQ9BVM2 203 aaPredicted RBP14.89□□□□□ -0.03
GGPS1-206ENST00000488594 CHCHD3Q9NX63 227 aaKnown RBP14.89□□□□□ -0.03
GGPS1-206ENST00000488594 TMEM212A6NML5 194 aa14.88□□□□□ -0.03
GGPS1-206ENST00000488594 SNTNA6NMZ2 147 aa14.88□□□□□ -0.03
GGPS1-206ENST00000488594 TXNL1O43396 289 aa14.88□□□□□ -0.03
GGPS1-206ENST00000488594 IGF1P05019 195 aa14.88□□□□□ -0.03
GGPS1-206ENST00000488594 RAB3AP20336 220 aa14.88□□□□□ -0.03
GGPS1-206ENST00000488594 PSMB8P28062 276 aa14.88□□□□□ -0.03
GGPS1-206ENST00000488594 SOX6P35712 828 aa14.88□□□□□ -0.03
GGPS1-206ENST00000488594 RSU1Q15404 277 aa14.88□□□□□ -0.03
GGPS1-206ENST00000488594 PIGYQ3MUY2 71 aa14.88□□□□□ -0.03
GGPS1-206ENST00000488594 MEDAGQ5VYS4 303 aa14.88□□□□□ -0.03
GGPS1-206ENST00000488594 OR11H1Q8NG94 326 aa14.88□□□□□ -0.03
GGPS1-206ENST00000488594 RTN4IP1Q8WWV3 396 aaPredicted RBP14.88□□□□□ -0.03
GGPS1-206ENST00000488594 CHCHD6Q9BRQ6 235 aa14.88□□□□□ -0.03
GGPS1-206ENST00000488594 IFT22Q9H7X7 185 aa14.88□□□□□ -0.03
GGPS1-206ENST00000488594 DHDHQ9UQ10 334 aa14.88□□□□□ -0.03
GGPS1-206ENST00000488594 TRAV39A0A0B4J263 110 aa14.87□□□□□ -0.03
GGPS1-206ENST00000488594 TMEM30CPA0ZSE6 113 aa14.87□□□□□ -0.03
GGPS1-206ENST00000488594 SDCBPO00560 298 aaPredicted RBP14.87□□□□□ -0.03
GGPS1-206ENST00000488594 GABRPO00591 440 aa14.87□□□□□ -0.03
GGPS1-206ENST00000488594 LY86O95711 162 aa14.87□□□□□ -0.03
GGPS1-206ENST00000488594 OR8U8P0C7N1 319 aa14.87□□□□□ -0.03
GGPS1-206ENST00000488594 MRPL28Q13084 256 aaKnown RBP14.87□□□□□ -0.03
GGPS1-206ENST00000488594 Q3ZCU0 254 aa14.87□□□□□ -0.03
GGPS1-206ENST00000488594 LPCAT4Q643R3 524 aa14.87□□□□□ -0.03
GGPS1-206ENST00000488594 SYS1Q8N2H4 156 aa14.87□□□□□ -0.03
GGPS1-206ENST00000488594 FAM71E2Q8N5Q1 922 aa14.87□□□□□ -0.03
GGPS1-206ENST00000488594 SUMF2Q8NBJ7 301 aa14.87□□□□□ -0.03
GGPS1-206ENST00000488594 ST6GALNAC6Q969X2 333 aa14.87□□□□□ -0.03
GGPS1-206ENST00000488594 FAM192AQ9GZU8 254 aa14.87□□□□□ -0.03
GGPS1-206ENST00000488594 OAZ3Q9UMX2 235 aa14.87□□□□□ -0.03
GGPS1-206ENST00000488594 C15orf65H3BRN8 121 aa14.86□□□□□ -0.03
GGPS1-206ENST00000488594 ORC5O43913 435 aa14.86□□□□□ -0.03
GGPS1-206ENST00000488594 SNRPGP62308 76 aaKnown RBP14.86□□□□□ -0.03
GGPS1-206ENST00000488594 NHLRC3Q5JS37 347 aa14.86□□□□□ -0.03
GGPS1-206ENST00000488594 FAM27D1Q5T7N8 215 aa14.86□□□□□ -0.03
GGPS1-206ENST00000488594 ZNF529Q6P280 563 aa14.86□□□□□ -0.03
GGPS1-206ENST00000488594 ASCL4Q6XD76 172 aa14.86□□□□□ -0.03
GGPS1-206ENST00000488594 SATL1Q86VE3 508 aa14.86□□□□□ -0.03
GGPS1-206ENST00000488594 OR5AK2Q8NH90 309 aa14.86□□□□□ -0.03
GGPS1-206ENST00000488594 MYOZ3Q8TDC0 251 aa14.86□□□□□ -0.03
GGPS1-206ENST00000488594 TSEN15Q8WW01 171 aaKnown RBP14.86□□□□□ -0.03
GGPS1-206ENST00000488594 ARL11Q969Q4 196 aa14.86□□□□□ -0.03
GGPS1-206ENST00000488594 KCTD7Q96MP8 289 aa14.86□□□□□ -0.03
GGPS1-206ENST00000488594 RCHY1Q96PM5 261 aa14.86□□□□□ -0.03
GGPS1-206ENST00000488594 HSPB9Q9BQS6 159 aa14.86□□□□□ -0.03
GGPS1-206ENST00000488594 GFOD1Q9NXC2 390 aa14.86□□□□□ -0.03
GGPS1-206ENST00000488594 EXOGQ9Y2C4 368 aaKnown RBP14.86□□□□□ -0.03
GGPS1-206ENST00000488594 OR7C1O76099 320 aaPredicted RBP14.85□□□□□ -0.03
GGPS1-206ENST00000488594 GALEQ14376 348 aa14.85□□□□□ -0.03
GGPS1-206ENST00000488594 LINC00596Q86U02 117 aa14.85□□□□□ -0.03
GGPS1-206ENST00000488594 OR10K1Q8NGX5 313 aa14.85□□□□□ -0.03
GGPS1-206ENST00000488594 CENPNQ96H22 339 aaPredicted RBP14.85□□□□□ -0.03
GGPS1-206ENST00000488594 UBE2E2Q96LR5 201 aa14.85□□□□□ -0.03
GGPS1-206ENST00000488594 ALG8Q9BVK2 526 aa14.85□□□□□ -0.03
GGPS1-206ENST00000488594 ST3GAL6Q9Y274 331 aa14.85□□□□□ -0.03
GGPS1-206ENST00000488594 HTR3BO95264 441 aa14.85□□□□□ -0.03
GGPS1-206ENST00000488594 ZNF137PP52743 207 aa14.85□□□□□ -0.03
GGPS1-206ENST00000488594 RUNX1Q01196 453 aa14.85□□□□□ -0.03
GGPS1-206ENST00000488594 TMEM65Q6PI78 240 aa14.85□□□□□ -0.03
GGPS1-206ENST00000488594 ZNF429Q86V71 674 aa14.85□□□□□ -0.03
GGPS1-206ENST00000488594 OR1N2Q8NGR9 330 aa14.85□□□□□ -0.03
GGPS1-206ENST00000488594 RAB9BQ9NP90 201 aa14.85□□□□□ -0.03
GGPS1-206ENST00000488594 IL36GQ9NZH8 169 aa14.85□□□□□ -0.03
GGPS1-206ENST00000488594 ZNF107Q9UII5 783 aaPredicted RBP14.85□□□□□ -0.03
GGPS1-206ENST00000488594 CSTBP04080 98 aaKnown RBP14.84□□□□□ -0.03
GGPS1-206ENST00000488594 LYL1P12980 280 aa14.84□□□□□ -0.03
GGPS1-206ENST00000488594 RBM11P57052 281 aaKnown RBP14.84□□□□□ -0.03
GGPS1-206ENST00000488594 ZNF616Q08AN1 781 aa14.84□□□□□ -0.03
GGPS1-206ENST00000488594 TMEM30BQ3MIR4 351 aa14.84□□□□□ -0.03
GGPS1-206ENST00000488594 SBSPONQ8IVN8 264 aa14.84□□□□□ -0.03
GGPS1-206ENST00000488594 OR51A2Q8NGJ7 313 aa14.84□□□□□ -0.03
GGPS1-206ENST00000488594 OR52N1Q8NH53 320 aa14.84□□□□□ -0.03
GGPS1-206ENST00000488594 LGALS12Q96DT0 336 aa14.84□□□□□ -0.03
GGPS1-206ENST00000488594 PDCD1LG2Q9BQ51 273 aa14.84□□□□□ -0.03
GGPS1-206ENST00000488594 METTL9Q9H1A3 318 aa14.84□□□□□ -0.03
GGPS1-206ENST00000488594 PAK1IP1Q9NWT1 392 aaPredicted RBP14.84□□□□□ -0.03
GGPS1-206ENST00000488594 VSIG4Q9Y279 399 aa14.84□□□□□ -0.03
GGPS1-206ENST00000488594 ZNF736B4DX44 427 aaPredicted RBP14.83□□□□□ -0.04
GGPS1-206ENST00000488594 F2RL1P55085 397 aa14.83□□□□□ -0.04
GGPS1-206ENST00000488594 MPV17LQ2QL34 196 aa14.83□□□□□ -0.04
GGPS1-206ENST00000488594 SLC25A48Q6ZT89 311 aaKnown RBP14.83□□□□□ -0.04
GGPS1-206ENST00000488594 LHFPL3Q86UP9 236 aa14.83□□□□□ -0.04
GGPS1-206ENST00000488594 ISG20L2Q9H9L3 353 aaKnown RBP14.83□□□□□ -0.04
GGPS1-206ENST00000488594 PALMDQ9NP74 551 aa14.83□□□□□ -0.04
GGPS1-206ENST00000488594 ZNF581Q9P0T4 197 aa14.83□□□□□ -0.04
GGPS1-206ENST00000488594 ORC6Q9Y5N6 252 aa14.83□□□□□ -0.04
GGPS1-206ENST00000488594 I3L521 148 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms