RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 VGLL3A8MV65 326 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 PDCD5O14737 125 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 SPINT2O43291 252 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 SC5DO75845 299 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 MT-ND4P03905 459 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 MYL9P24844 172 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 PSMB9P28065 219 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 CD34P28906 385 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 SSTR5P35346 364 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 MNDAP41218 407 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 PSMD7P51665 324 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 FABP5Q01469 135 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 PAX5Q02548 391 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 P2RY14Q15391 338 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 RAB11BQ15907 218 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 C1orf100Q5SVJ3 147 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 C6orf183Q5T699 404 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 OR10K2Q6IF99 312 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 ZNF497Q6ZNH5 498 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 TMEM219Q86XT9 240 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 DTX3Q8N9I9 347 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 OR10A7Q8NGE5 316 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 OR4P4Q8NGL7 312 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 OR6M1Q8NGM8 313 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 OR10X1Q8NGY0 326 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 OR4K15Q8NH41 348 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 LINC01006Q8NI28 216 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 LEAP2Q969E1 77 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 KIRREL1Q96J84 757 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 Q96M66 194 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 TMEM59Q9BXS4 323 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 NPFFR1Q9GZQ6 430 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 C16orf95Q9H693 158 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 LRRC42Q9Y546 428 aa10.11□□□□□ -0.79
PTCD1-205ENST00000485746 BUB1B-PAK6H3BSN5 160 aa10.1□□□□□ -0.79
PTCD1-205ENST00000485746 SDCBPO00560 298 aaPredicted RBP10.1□□□□□ -0.79
PTCD1-205ENST00000485746 PDCD6O75340 191 aa10.1□□□□□ -0.79
PTCD1-205ENST00000485746 TSPAN9O75954 239 aa10.1□□□□□ -0.79
PTCD1-205ENST00000485746 BPNT1O95861 308 aa10.1□□□□□ -0.79
PTCD1-205ENST00000485746 GLAP06280 429 aa10.1□□□□□ -0.79
PTCD1-205ENST00000485746 CGB3P0DN86 165 aa10.1□□□□□ -0.79
PTCD1-205ENST00000485746 CGB7P0DN87 165 aa10.1□□□□□ -0.79
PTCD1-205ENST00000485746 VSIG8P0DPA2 414 aa10.1□□□□□ -0.79
PTCD1-205ENST00000485746 ARSBP15848 533 aa10.1□□□□□ -0.79
PTCD1-205ENST00000485746 HLA-DRB5Q30154 266 aa10.1□□□□□ -0.79
PTCD1-205ENST00000485746 LDLRAD2Q5SZI1 272 aa10.1□□□□□ -0.79
PTCD1-205ENST00000485746 SYT6Q5T7P8 510 aaPredicted RBP10.1□□□□□ -0.79
PTCD1-205ENST00000485746 LYPD6Q86Y78 171 aa10.1□□□□□ -0.79
PTCD1-205ENST00000485746 PRR18Q8N4B5 295 aa10.1□□□□□ -0.79
PTCD1-205ENST00000485746 UBALD1Q8TB05 177 aa10.1□□□□□ -0.79
PTCD1-205ENST00000485746 PIFOQ8TCI5 191 aa10.1□□□□□ -0.79
PTCD1-205ENST00000485746 RPEQ96AT9 228 aa10.1□□□□□ -0.79
PTCD1-205ENST00000485746 URM1Q9BTM9 101 aaKnown RBP10.1□□□□□ -0.79
PTCD1-205ENST00000485746 MMP28Q9H239 520 aa10.1□□□□□ -0.79
PTCD1-205ENST00000485746 KCNIP1Q9NZI2 227 aa10.1□□□□□ -0.79
PTCD1-205ENST00000485746 RCC2Q9P258 522 aaKnown RBP10.1□□□□□ -0.79
PTCD1-205ENST00000485746 TCF19Q9Y242 345 aa10.1□□□□□ -0.79
PTCD1-205ENST00000485746 A0A087X0M5 115 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 A0A1B0GX30 115 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 NPIPB11E5RHQ5 1161 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 J3QR06 171 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 CCRL2O00421 344 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 SLC22A1O15245 554 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 ORC5O43913 435 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 PEX14O75381 377 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 IGLV1-47P01700 117 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 JUNBP17275 347 aaPredicted RBP10.09□□□□□ -0.79
PTCD1-205ENST00000485746 DYNLT3P51808 116 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 RPS27AP62979 156 aaKnown RBP10.09□□□□□ -0.79
PTCD1-205ENST00000485746 TPTE2P1Q5T6R2 138 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 CCDC144NLQ6NUI1 221 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 TRAT1Q6PIZ9 186 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 SLC16A12Q6ZSM3 486 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 SPARTQ8N0X7 666 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 OR2T6Q8NHC8 308 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 WFDC12Q8WWY7 111 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 FCGR1BQ92637 280 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 TOMM40LQ969M1 308 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 KCNK15Q9H427 330 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 LINC00574Q9H8X3 128 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 CHMP1AQ9HD42 196 aaPredicted RBP10.09□□□□□ -0.79
PTCD1-205ENST00000485746 PLEKHJ1Q9NW61 149 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 GNG12Q9UBI6 72 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 PSG11Q9UQ72 335 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 V9GY05 133 aa10.09□□□□□ -0.79
PTCD1-205ENST00000485746 IGHV3-43A0A0B4J1X8 118 aa10.08□□□□□ -0.8
PTCD1-205ENST00000485746 A0A1W2PPE3 182 aa10.08□□□□□ -0.8
PTCD1-205ENST00000485746 A6NDX4 124 aa10.08□□□□□ -0.8
PTCD1-205ENST00000485746 OOSP1A8MZH6 123 aa10.08□□□□□ -0.8
PTCD1-205ENST00000485746 SLC17A2O00624 439 aa10.08□□□□□ -0.8
PTCD1-205ENST00000485746 CA11O75493 328 aa10.08□□□□□ -0.8
PTCD1-205ENST00000485746 IGHV3-43DP0DP04 118 aa10.08□□□□□ -0.8
PTCD1-205ENST00000485746 CD24P25063 80 aa10.08□□□□□ -0.8
PTCD1-205ENST00000485746 BLVRBP30043 206 aaPredicted RBP10.08□□□□□ -0.8
PTCD1-205ENST00000485746 SRSF4Q08170 494 aaKnown RBP10.08□□□□□ -0.8
PTCD1-205ENST00000485746 MADCAM1Q13477 382 aa10.08□□□□□ -0.8
PTCD1-205ENST00000485746 SSX1Q16384 188 aa10.08□□□□□ -0.8
PTCD1-205ENST00000485746 HES5Q5TA89 166 aa10.08□□□□□ -0.8
PTCD1-205ENST00000485746 UBE2UQ5VVX9 321 aa10.08□□□□□ -0.8
PTCD1-205ENST00000485746 OR51D1Q8NGF3 324 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms