RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 LPLP06858 475 aa13.02□□□□□ -0.33
APOE-205ENST00000485628 LIPFP07098 398 aa13.02□□□□□ -0.33
APOE-205ENST00000485628 MSMBP08118 114 aa13.02□□□□□ -0.33
APOE-205ENST00000485628 PPIAL4GP0DN37 164 aa13.02□□□□□ -0.33
APOE-205ENST00000485628 LCN2P80188 198 aa13.02□□□□□ -0.33
APOE-205ENST00000485628 DGCR2P98153 550 aa13.02□□□□□ -0.33
APOE-205ENST00000485628 PAX8Q06710 450 aa13.02□□□□□ -0.33
APOE-205ENST00000485628 MADCAM1Q13477 382 aa13.02□□□□□ -0.33
APOE-205ENST00000485628 IL18Q14116 193 aa13.02□□□□□ -0.33
APOE-205ENST00000485628 FAM131AQ6UXB0 335 aa13.02□□□□□ -0.33
APOE-205ENST00000485628 MOB1BQ7L9L4 216 aa13.02□□□□□ -0.33
APOE-205ENST00000485628 KIR3DL3Q8N743 410 aa13.02□□□□□ -0.33
APOE-205ENST00000485628 Q8N7P7 452 aa13.02□□□□□ -0.33
APOE-205ENST00000485628 ZNF565Q8N9K5 539 aa13.02□□□□□ -0.33
APOE-205ENST00000485628 MAPK1IP1LQ8NDC0 245 aa13.02□□□□□ -0.33
APOE-205ENST00000485628 OR52I2Q8NH67 350 aa13.02□□□□□ -0.33
APOE-205ENST00000485628 S100ZQ8WXG8 99 aa13.02□□□□□ -0.33
APOE-205ENST00000485628 MSI2Q96DH6 328 aaKnown RBP13.02□□□□□ -0.33
APOE-205ENST00000485628 ITGB1BP2Q9UKP3 347 aa13.02□□□□□ -0.33
APOE-205ENST00000485628 INSIG2Q9Y5U4 225 aa13.02□□□□□ -0.33
APOE-205ENST00000485628 CSPG4Q6UVK1 2322 aa13.02□□□□□ -0.33
APOE-205ENST00000485628 TRAV39A0A0B4J263 110 aa13.01□□□□□ -0.33
APOE-205ENST00000485628 KBTBD11-OT1A0A1B0GTJ5 212 aa13.01□□□□□ -0.33
APOE-205ENST00000485628 ZNF729A6NN14 1252 aaPredicted RBP13.01□□□□□ -0.33
APOE-205ENST00000485628 C12orf77C9JDV5 145 aa13.01□□□□□ -0.33
APOE-205ENST00000485628 F2RL2O00254 374 aa13.01□□□□□ -0.33
APOE-205ENST00000485628 ENSAO43768 121 aaKnown RBP13.01□□□□□ -0.33
APOE-205ENST00000485628 DIRAS3O95661 229 aa13.01□□□□□ -0.33
APOE-205ENST00000485628 RBP4P02753 201 aa13.01□□□□□ -0.33
APOE-205ENST00000485628 ZNF728P0DKX0 622 aa13.01□□□□□ -0.33
APOE-205ENST00000485628 MMP9P14780 707 aa13.01□□□□□ -0.33
APOE-205ENST00000485628 CBX5P45973 191 aa13.01□□□□□ -0.33
APOE-205ENST00000485628 GNG2P59768 71 aa13.01□□□□□ -0.33
APOE-205ENST00000485628 SSBP1Q04837 148 aaKnown RBP13.01□□□□□ -0.33
APOE-205ENST00000485628 ARFRP1Q13795 201 aa13.01□□□□□ -0.33
APOE-205ENST00000485628 C5orf24Q7Z6I8 188 aa13.01□□□□□ -0.33
APOE-205ENST00000485628 LYSMD2Q8IV50 215 aa13.01□□□□□ -0.33
APOE-205ENST00000485628 GVQW1Q8N7I0 195 aa13.01□□□□□ -0.33
APOE-205ENST00000485628 GDPD1Q8N9F7 314 aa13.01□□□□□ -0.33
APOE-205ENST00000485628 LINC01356Q8N9X3 169 aa13.01□□□□□ -0.33
APOE-205ENST00000485628 H1FXQ92522 213 aaKnown RBP13.01□□□□□ -0.33
APOE-205ENST00000485628 SNAPC3Q92966 411 aa13.01□□□□□ -0.33
APOE-205ENST00000485628 TRIM63Q969Q1 353 aa13.01□□□□□ -0.33
APOE-205ENST00000485628 TOLLIPQ9H0E2 274 aa13.01□□□□□ -0.33
APOE-205ENST00000485628 UNKLQ9H9P5 680 aaKnown RBP13.01□□□□□ -0.33
APOE-205ENST00000485628 KLK11Q9UBX7 282 aa13.01□□□□□ -0.33
APOE-205ENST00000485628 ZNF230Q9UIE0 474 aaPredicted RBP13.01□□□□□ -0.33
APOE-205ENST00000485628 MGAT4AQ9UM21 535 aa13.01□□□□□ -0.33
APOE-205ENST00000485628 TRGV10A0A0A0MS01 117 aa13□□□□□ -0.33
APOE-205ENST00000485628 M0R1W7 72 aa13□□□□□ -0.33
APOE-205ENST00000485628 LANCL1O43813 399 aa13□□□□□ -0.33
APOE-205ENST00000485628 CCL3L1P16619 93 aa13□□□□□ -0.33
APOE-205ENST00000485628 GZMKP49863 264 aa13□□□□□ -0.33
APOE-205ENST00000485628 TRAT1Q6PIZ9 186 aa13□□□□□ -0.33
APOE-205ENST00000485628 HEPN1Q6WQI6 88 aa13□□□□□ -0.33
APOE-205ENST00000485628 TRAPPC6BQ86SZ2 158 aa13□□□□□ -0.33
APOE-205ENST00000485628 MRGPRDQ8TDS7 321 aa13□□□□□ -0.33
APOE-205ENST00000485628 CCDC107Q8WV48 283 aa13□□□□□ -0.33
APOE-205ENST00000485628 FCAMRQ8WWV6 532 aa13□□□□□ -0.33
APOE-205ENST00000485628 TMUB1Q9BVT8 246 aa13□□□□□ -0.33
APOE-205ENST00000485628 SIRPDQ9H106 197 aa13□□□□□ -0.33
APOE-205ENST00000485628 ING3Q9NXR8 418 aa13□□□□□ -0.33
APOE-205ENST00000485628 ZNF107Q9UII5 783 aaPredicted RBP13□□□□□ -0.33
APOE-205ENST00000485628 TRAPPC2LQ9UL33 140 aa13□□□□□ -0.33
APOE-205ENST00000485628 A0A087X0M5 115 aa12.99□□□□□ -0.33
APOE-205ENST00000485628 TRAV20A0A0B4J274 112 aa12.99□□□□□ -0.33
APOE-205ENST00000485628 IGKV1-6A0A0C4DH72 117 aa12.99□□□□□ -0.33
APOE-205ENST00000485628 A0A1B0GX30 115 aa12.99□□□□□ -0.33
APOE-205ENST00000485628 TRDCB7Z8K6 153 aa12.99□□□□□ -0.33
APOE-205ENST00000485628 MMP23AO75900 390 aa12.99□□□□□ -0.33
APOE-205ENST00000485628 CD40LGP29965 261 aa12.99□□□□□ -0.33
APOE-205ENST00000485628 SSTR5P35346 364 aa12.99□□□□□ -0.33
APOE-205ENST00000485628 PPP5CP53041 499 aa12.99□□□□□ -0.33
APOE-205ENST00000485628 DVL1P1P54792 670 aaPredicted RBP12.99□□□□□ -0.33
APOE-205ENST00000485628 LOXL3P58215 753 aa12.99□□□□□ -0.33
APOE-205ENST00000485628 HTD2P86397 168 aa12.99□□□□□ -0.33
APOE-205ENST00000485628 HERPUD1Q15011 391 aa12.99□□□□□ -0.33
APOE-205ENST00000485628 BAK1Q16611 211 aa12.99□□□□□ -0.33
APOE-205ENST00000485628 C6orf183Q5T699 404 aa12.99□□□□□ -0.33
APOE-205ENST00000485628 OR10A7Q8NGE5 316 aa12.99□□□□□ -0.33
APOE-205ENST00000485628 TNFRSF14Q92956 283 aa12.99□□□□□ -0.33
APOE-205ENST00000485628 ZNF714Q96N38 554 aa12.99□□□□□ -0.33
APOE-205ENST00000485628 CABLES2Q9BTV7 478 aa12.99□□□□□ -0.33
APOE-205ENST00000485628 TAF9BQ9HBM6 251 aa12.99□□□□□ -0.33
APOE-205ENST00000485628 CALYQ9NYX4 217 aa12.99□□□□□ -0.33
APOE-205ENST00000485628 KPTNQ9Y664 436 aa12.99□□□□□ -0.33
APOE-205ENST00000485628 HIVEP1P15822 2718 aa12.98□□□□□ -0.33
APOE-205ENST00000485628 CD74P04233 296 aa12.98□□□□□ -0.33
APOE-205ENST00000485628 SCTP09683 121 aa12.98□□□□□ -0.33
APOE-205ENST00000485628 GATA3P23771 443 aa12.98□□□□□ -0.33
APOE-205ENST00000485628 GDNFP39905 211 aa12.98□□□□□ -0.33
APOE-205ENST00000485628 HLA-DRB3P79483 266 aa12.98□□□□□ -0.33
APOE-205ENST00000485628 LY6G6FQ5SQ64 297 aa12.98□□□□□ -0.33
APOE-205ENST00000485628 FAM185AQ8N0U4 392 aa12.98□□□□□ -0.33
APOE-205ENST00000485628 Q8N402 240 aa12.98□□□□□ -0.33
APOE-205ENST00000485628 OR52M1Q8NGK5 317 aa12.98□□□□□ -0.33
APOE-205ENST00000485628 OR4A4PQ8NGN8 299 aa12.98□□□□□ -0.33
APOE-205ENST00000485628 TMEM186Q96B77 213 aa12.98□□□□□ -0.33
APOE-205ENST00000485628 THAP7Q9BT49 309 aaPredicted RBP12.98□□□□□ -0.33
APOE-205ENST00000485628 ST6GALNAC5Q9BVH7 336 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms