RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 C11orf42Q8N5U0 333 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 TPRX1Q8N7U7 411 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 SUMF2Q8NBJ7 301 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 NEK7Q8TDX7 302 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 DPCDQ9BVM2 203 aaPredicted RBP7.27□□□□□ -1.25
COL8A1-207ENST00000483969 PRDM13Q9H4Q3 707 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 BANF2Q9H503 90 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 ZMAT3Q9HA38 289 aaKnown RBP7.27□□□□□ -1.25
COL8A1-207ENST00000483969 ING3Q9NXR8 418 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 STUB1Q9UNE7 303 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 CSPG4Q6UVK1 2322 aa7.27□□□□□ -1.25
COL8A1-207ENST00000483969 A0A1W2PP11 408 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 A0A1W2PRD5 423 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 A0A1W2PRF3 423 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 A0A1W2PRM7 423 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 TMEM30CPA0ZSE6 113 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 MEIOCA2RUB1 952 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 ZNF729A6NN14 1252 aaPredicted RBP7.26□□□□□ -1.25
COL8A1-207ENST00000483969 HSPB6O14558 160 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 CA11O75493 328 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 MPIG6BO95866 241 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 PAHP00439 452 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 FBP1P09467 338 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 IGHV1-8P0DP01 117 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 FUT3P21217 361 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 DLX6P56179 175 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 PAX5Q02548 391 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 ATXN7L3Q14CW9 347 aaPredicted RBP7.26□□□□□ -1.25
COL8A1-207ENST00000483969 NEDD8Q15843 81 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 FAM189A2Q15884 450 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 RAB11BQ15907 218 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 C22orf42Q6IC83 251 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 Q6YL49 198 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 OR2W3Q7Z3T1 314 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 TPRA1Q86W33 373 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 TMEM104Q8NE00 496 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 C1orf147Q96MC9 270 aaPredicted RBP7.26□□□□□ -1.25
COL8A1-207ENST00000483969 ZNF48Q96MX3 618 aaPredicted RBP7.26□□□□□ -1.25
COL8A1-207ENST00000483969 NEDD4LQ96PU5 975 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 URM1Q9BTM9 101 aaKnown RBP7.26□□□□□ -1.25
COL8A1-207ENST00000483969 DPAGT1Q9H3H5 408 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 ZNF696Q9H7X3 374 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 PEX16Q9Y5Y5 336 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 SOX21Q9Y651 276 aaPredicted RBP7.26□□□□□ -1.25
COL8A1-207ENST00000483969 SESN1Q9Y6P5 492 aa7.26□□□□□ -1.25
COL8A1-207ENST00000483969 TEP1Q99973 2627 aaKnown RBP7.26□□□□□ -1.25
COL8A1-207ENST00000483969 ANK3Q12955 4377 aaKnown RBP7.25□□□□□ -1.25
COL8A1-207ENST00000483969 A0A0U1RQK1 487 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 KBTBD11-OT1A0A1B0GTJ5 212 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 CLDN34H7C241 214 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 CD36P16671 472 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 RAB3BP20337 219 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 COX7A1P24310 79 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 RPS27AP62979 156 aaKnown RBP7.25□□□□□ -1.25
COL8A1-207ENST00000483969 KLRD1Q13241 179 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 DYNC1I2Q13409 638 aaKnown RBP7.25□□□□□ -1.25
COL8A1-207ENST00000483969 C2orf76Q3KRA6 126 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 TIMM50Q3ZCQ8 353 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 RSBN1Q5VWQ0 802 aaPredicted RBP7.25□□□□□ -1.25
COL8A1-207ENST00000483969 OR10K2Q6IF99 312 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 RAB12Q6IQ22 244 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 HEPN1Q6WQI6 88 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 ZNF782Q6ZMW2 699 aaPredicted RBP7.25□□□□□ -1.25
COL8A1-207ENST00000483969 GDPGP1Q6ZNW5 385 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 Q6ZSN1 163 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 RTN4RL2Q86UN3 420 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 PNKDQ8N490 385 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 TMEM86BQ8N661 226 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 ZDHHC22Q8N966 263 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 OR11H6Q8NGC7 330 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 FAM216AQ8WUB2 273 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 FAM46BQ96A09 425 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 SLC25A28Q96A46 364 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 FAM3DQ96BQ1 224 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 COQ2Q96H96 371 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 KCTD7Q96MP8 289 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 TMEM59Q9BXS4 323 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 TMEM133Q9H2Q1 129 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 RAB9BQ9NP90 201 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 TXNL4BQ9NX01 149 aaKnown RBP7.25□□□□□ -1.25
COL8A1-207ENST00000483969 ETAA1Q9NY74 926 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 RCC2Q9P258 522 aaKnown RBP7.25□□□□□ -1.25
COL8A1-207ENST00000483969 STEAP1Q9UHE8 339 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 KIF25Q9UIL4 384 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 POMT1Q9Y6A1 747 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 FN1P02751 2386 aaKnown RBP7.25□□□□□ -1.25
COL8A1-207ENST00000483969 ABCA1O95477 2261 aa7.25□□□□□ -1.25
COL8A1-207ENST00000483969 NF1P21359 2839 aa7.24□□□□□ -1.25
COL8A1-207ENST00000483969 MTORP42345 2549 aa7.24□□□□□ -1.25
COL8A1-207ENST00000483969 MEX3AA1L020 520 aaKnown RBP7.24□□□□□ -1.25
COL8A1-207ENST00000483969 BTBD17A6NE02 478 aa7.24□□□□□ -1.25
COL8A1-207ENST00000483969 TMEM14DPA8MWL7 114 aa7.24□□□□□ -1.25
COL8A1-207ENST00000483969 TOR1AO14656 332 aa7.24□□□□□ -1.25
COL8A1-207ENST00000483969 HOXA3O43365 443 aaPredicted RBP7.24□□□□□ -1.25
COL8A1-207ENST00000483969 PDCD6O75340 191 aa7.24□□□□□ -1.25
COL8A1-207ENST00000483969 CLPXO76031 633 aa7.24□□□□□ -1.25
COL8A1-207ENST00000483969 MT-ND4P03905 459 aa7.24□□□□□ -1.25
COL8A1-207ENST00000483969 ARG1P05089 322 aa7.24□□□□□ -1.25
COL8A1-207ENST00000483969 CGB3P0DN86 165 aa7.24□□□□□ -1.25
COL8A1-207ENST00000483969 CGB7P0DN87 165 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms