RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 YIPF6Q96EC8 236 aa12.7□□□□□ -0.38
RPP40-206ENST00000483546 MALSU1Q96EH3 234 aa12.7□□□□□ -0.38
RPP40-206ENST00000483546 MEGF9Q9H1U4 602 aa12.7□□□□□ -0.38
RPP40-206ENST00000483546 HSF4Q9ULV5 492 aa12.7□□□□□ -0.38
RPP40-206ENST00000483546 MINOS1-NBL1R4GNA1 71 aa12.7□□□□□ -0.38
RPP40-206ENST00000483546 LOC100506127A0A0U1RQW1 187 aa12.69□□□□□ -0.38
RPP40-206ENST00000483546 A0A1W2PRD5 423 aa12.69□□□□□ -0.38
RPP40-206ENST00000483546 A0A1W2PRF3 423 aa12.69□□□□□ -0.38
RPP40-206ENST00000483546 A0A1W2PRM7 423 aa12.69□□□□□ -0.38
RPP40-206ENST00000483546 BTBD17A6NE02 478 aa12.69□□□□□ -0.38
RPP40-206ENST00000483546 POM121CA8CG34 1229 aa12.69□□□□□ -0.38
RPP40-206ENST00000483546 BLVRBP30043 206 aaPredicted RBP12.69□□□□□ -0.38
RPP40-206ENST00000483546 IER3P46695 156 aa12.69□□□□□ -0.38
RPP40-206ENST00000483546 CLDN12P56749 244 aa12.69□□□□□ -0.38
RPP40-206ENST00000483546 SCAND1P57086 179 aa12.69□□□□□ -0.38
RPP40-206ENST00000483546 NKAPLQ5M9Q1 402 aa12.69□□□□□ -0.38
RPP40-206ENST00000483546 PRAMEF5Q5TYX0 476 aa12.69□□□□□ -0.38
RPP40-206ENST00000483546 BRICD5Q6PL45 260 aa12.69□□□□□ -0.38
RPP40-206ENST00000483546 CROCCP3Q8IVE0 287 aa12.69□□□□□ -0.38
RPP40-206ENST00000483546 OR52M1Q8NGK5 317 aa12.69□□□□□ -0.38
RPP40-206ENST00000483546 OR5R1Q8NH85 324 aa12.69□□□□□ -0.38
RPP40-206ENST00000483546 KIRREL1Q96J84 757 aa12.69□□□□□ -0.38
RPP40-206ENST00000483546 C19orf24Q9BVV8 132 aa12.69□□□□□ -0.38
RPP40-206ENST00000483546 RIMS4Q9H426 269 aaPredicted RBP12.69□□□□□ -0.38
RPP40-206ENST00000483546 LIN7BQ9HAP6 207 aa12.69□□□□□ -0.38
RPP40-206ENST00000483546 PLEKHJ1Q9NW61 149 aa12.69□□□□□ -0.38
RPP40-206ENST00000483546 IDI2-AS1Q9NZ38 188 aa12.69□□□□□ -0.38
RPP40-206ENST00000483546 TRAPPC2LQ9UL33 140 aa12.69□□□□□ -0.38
RPP40-206ENST00000483546 COL6A5A8TX70 2615 aa12.68□□□□□ -0.38
RPP40-206ENST00000483546 TMEM272A0A1B0GTI8 110 aa12.68□□□□□ -0.38
RPP40-206ENST00000483546 AIREO43918 545 aa12.68□□□□□ -0.38
RPP40-206ENST00000483546 MMP23AO75900 390 aa12.68□□□□□ -0.38
RPP40-206ENST00000483546 SDC2P34741 201 aa12.68□□□□□ -0.38
RPP40-206ENST00000483546 PRRX1P54821 245 aa12.68□□□□□ -0.38
RPP40-206ENST00000483546 DYNC1I2Q13409 638 aaKnown RBP12.68□□□□□ -0.38
RPP40-206ENST00000483546 Q3ZCU0 254 aa12.68□□□□□ -0.38
RPP40-206ENST00000483546 NR2C2APQ86WQ0 139 aa12.68□□□□□ -0.38
RPP40-206ENST00000483546 ABHD12Q8N2K0 398 aa12.68□□□□□ -0.38
RPP40-206ENST00000483546 MDFIQ99750 246 aa12.68□□□□□ -0.38
RPP40-206ENST00000483546 NICN1Q9BSH3 213 aa12.68□□□□□ -0.38
RPP40-206ENST00000483546 CENPOQ9BU64 300 aa12.68□□□□□ -0.38
RPP40-206ENST00000483546 MRPS26Q9BYN8 205 aaKnown RBP12.68□□□□□ -0.38
RPP40-206ENST00000483546 KCNK15Q9H427 330 aa12.68□□□□□ -0.38
RPP40-206ENST00000483546 MBNL3Q9NUK0 354 aaKnown RBP12.68□□□□□ -0.38
RPP40-206ENST00000483546 FBN1P35555 2871 aaKnown RBP12.67□□□□□ -0.38
RPP40-206ENST00000483546 UBE2QL1A1L167 161 aa12.67□□□□□ -0.38
RPP40-206ENST00000483546 METTL21EPA6NDL7 271 aa12.67□□□□□ -0.38
RPP40-206ENST00000483546 FOXI3A8MTJ6 420 aaPredicted RBP12.67□□□□□ -0.38
RPP40-206ENST00000483546 C15orf65H3BRN8 121 aa12.67□□□□□ -0.38
RPP40-206ENST00000483546 TOR1AO14656 332 aa12.67□□□□□ -0.38
RPP40-206ENST00000483546 SPINT2O43291 252 aa12.67□□□□□ -0.38
RPP40-206ENST00000483546 IGLV1-47P01700 117 aa12.67□□□□□ -0.38
RPP40-206ENST00000483546 SMIM18P0DKX4 95 aa12.67□□□□□ -0.38
RPP40-206ENST00000483546 OMGP23515 440 aa12.67□□□□□ -0.38
RPP40-206ENST00000483546 HTR1DP28221 377 aa12.67□□□□□ -0.38
RPP40-206ENST00000483546 SSTR5P35346 364 aa12.67□□□□□ -0.38
RPP40-206ENST00000483546 SRSF2Q01130 221 aaKnown RBP12.67□□□□□ -0.38
RPP40-206ENST00000483546 SFXN4Q6P4A7 337 aa12.67□□□□□ -0.38
RPP40-206ENST00000483546 C16orf87Q6PH81 154 aa12.67□□□□□ -0.38
RPP40-206ENST00000483546 MOB1BQ7L9L4 216 aa12.67□□□□□ -0.38
RPP40-206ENST00000483546 C6orf201Q7Z4U5 140 aa12.67□□□□□ -0.38
RPP40-206ENST00000483546 OR13F1Q8NGS4 319 aa12.67□□□□□ -0.38
RPP40-206ENST00000483546 OR9G1Q8NH87 305 aa12.67□□□□□ -0.38
RPP40-206ENST00000483546 DYRK2Q92630 601 aa12.67□□□□□ -0.38
RPP40-206ENST00000483546 ARL11Q969Q4 196 aa12.67□□□□□ -0.38
RPP40-206ENST00000483546 AJUBAQ96IF1 538 aa12.67□□□□□ -0.38
RPP40-206ENST00000483546 SULT4A1Q9BR01 284 aa12.67□□□□□ -0.38
RPP40-206ENST00000483546 KCNIP1Q9NZI2 227 aa12.67□□□□□ -0.38
RPP40-206ENST00000483546 A0A0A6YYD4 124 aa12.66□□□□□ -0.38
RPP40-206ENST00000483546 VGLL3A8MV65 326 aa12.66□□□□□ -0.38
RPP40-206ENST00000483546 F2RL2O00254 374 aa12.66□□□□□ -0.38
RPP40-206ENST00000483546 SCGNO76038 276 aa12.66□□□□□ -0.38
RPP40-206ENST00000483546 NFYBP25208 207 aa12.66□□□□□ -0.38
RPP40-206ENST00000483546 GDNFP39905 211 aa12.66□□□□□ -0.38
RPP40-206ENST00000483546 CEACAM3P40198 252 aa12.66□□□□□ -0.38
RPP40-206ENST00000483546 VEGFCP49767 419 aa12.66□□□□□ -0.38
RPP40-206ENST00000483546 ARL6IP1Q15041 203 aa12.66□□□□□ -0.38
RPP40-206ENST00000483546 LRRC75BQ2VPJ9 315 aa12.66□□□□□ -0.38
RPP40-206ENST00000483546 Q6ZTK2 550 aa12.66□□□□□ -0.38
RPP40-206ENST00000483546 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.66□□□□□ -0.38
RPP40-206ENST00000483546 C8orf31Q8N9H6 132 aa12.66□□□□□ -0.38
RPP40-206ENST00000483546 OR4P4Q8NGL7 312 aa12.66□□□□□ -0.38
RPP40-206ENST00000483546 OR4K15Q8NH41 348 aa12.66□□□□□ -0.38
RPP40-206ENST00000483546 SPATA3Q8NHX4 192 aa12.66□□□□□ -0.38
RPP40-206ENST00000483546 MRPL30Q8TCC3 161 aaKnown RBP12.66□□□□□ -0.38
RPP40-206ENST00000483546 CCDC107Q8WV48 283 aa12.66□□□□□ -0.38
RPP40-206ENST00000483546 FAAP24Q9BTP7 215 aa12.66□□□□□ -0.38
RPP40-206ENST00000483546 ZNF286AQ9HBT8 521 aa12.66□□□□□ -0.38
RPP40-206ENST00000483546 DPM3Q9P2X0 92 aa12.66□□□□□ -0.38
RPP40-206ENST00000483546 VPREB3Q9UKI3 123 aa12.66□□□□□ -0.38
RPP40-206ENST00000483546 MGAT4AQ9UM21 535 aa12.66□□□□□ -0.38
RPP40-206ENST00000483546 AMMECR1Q9Y4X0 333 aaPredicted RBP12.66□□□□□ -0.38
RPP40-206ENST00000483546 TRBV6-6A0A0A6YYG2 114 aa12.65□□□□□ -0.38
RPP40-206ENST00000483546 LEUTXA8MZ59 168 aa12.65□□□□□ -0.38
RPP40-206ENST00000483546 OOSP1A8MZH6 123 aa12.65□□□□□ -0.38
RPP40-206ENST00000483546 SOCS1O15524 211 aa12.65□□□□□ -0.38
RPP40-206ENST00000483546 NAPSAO96009 420 aa12.65□□□□□ -0.38
RPP40-206ENST00000483546 IGHV4-59P01825 116 aa12.65□□□□□ -0.38
RPP40-206ENST00000483546 DYNLT3P51808 116 aa12.65□□□□□ -0.38
RPP40-206ENST00000483546 ARHGDIBP52566 201 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms