RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 IFT81Q8WYA0 676 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 SEC22AQ96IW7 307 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 WFIKKN1Q96NZ8 548 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 SIGLEC12Q96PQ1 595 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 MED18Q9BUE0 208 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 SRMSQ9H3Y6 488 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 CIDEBQ9UHD4 219 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 SIGLEC9Q9Y336 463 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 NDUFAF1Q9Y375 327 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 UGT2A1Q9Y4X1 527 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 PCNX3Q9H6A9 2034 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 MEGF8Q7Z7M0 2845 aa2.49□□□□□ -2.01
SMC6-208ENST00000481708 IGHV3OR16-13A0A075B7E8 117 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 A0A087WW49 117 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 J3QT63 122 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 C6orf47O95873 294 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 NBEAP1P0C6P0 100 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 HTR1DP28221 377 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 GCKP35557 465 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 KIR2DS2P43631 304 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 VDAC2P45880 294 aaPredicted RBP2.48□□□□□ -2.01
SMC6-208ENST00000481708 HMGA2P52926 109 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 SNRPD1P62314 119 aaKnown RBP2.48□□□□□ -2.01
SMC6-208ENST00000481708 TFDP2Q14188 446 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 ATP6AP1Q15904 470 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 C9orf66Q5T8R8 295 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 UBE2UQ5VVX9 321 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 CCDC121Q6ZUS5 278 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 STRADAQ7RTN6 431 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 GALNT10Q86SR1 603 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 RPL36ALQ969Q0 106 aaKnown RBP2.48□□□□□ -2.01
SMC6-208ENST00000481708 ULBP1Q9BZM6 244 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 IMPAD1Q9NX62 359 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 SPG11Q96JI7 2443 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 EPPK1P58107 5090 aaKnown RBP2.48□□□□□ -2.01
SMC6-208ENST00000481708 MFNGO00587 321 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 GATCO43716 136 aaKnown RBP2.48□□□□□ -2.01
SMC6-208ENST00000481708 RP2O75695 350 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 HSD17B1P14061 328 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 SPCS3P61009 180 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 GNB1P62873 340 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 IHHQ14623 411 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 TRIP13Q15645 432 aaPredicted RBP2.48□□□□□ -2.01
SMC6-208ENST00000481708 CST6Q15828 149 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 LEMD1Q68G75 181 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 LRRN1Q6UXK5 716 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 SLC37A2Q8TED4 501 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 ITLN2Q8WWU7 325 aaPredicted RBP2.48□□□□□ -2.01
SMC6-208ENST00000481708 PIK3IP1Q96FE7 263 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 LINC00477Q96M19 166 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 SLIRPQ9GZT3 109 aaKnown RBP2.48□□□□□ -2.01
SMC6-208ENST00000481708 ABCG5Q9H222 651 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 TPK1Q9H3S4 243 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 MOB1AQ9H8S9 216 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 OR12D3Q9UGF7 316 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 PSG11Q9UQ72 335 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 VSIG4Q9Y279 399 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 UTP20O75691 2785 aaKnown RBP2.48□□□□□ -2.01
SMC6-208ENST00000481708 PIEZO2Q9H5I5 2752 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 METTL15A6NJ78 407 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 H7C2Y5 167 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 ENTPD6O75354 484 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 GLSO94925 669 aaPredicted RBP2.48□□□□□ -2.01
SMC6-208ENST00000481708 ELK4P28324 431 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 CD79BP40259 229 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 OR4D2P58180 307 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 C1orf100Q5SVJ3 147 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 TMEM236Q5W0B7 351 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 LCN12Q6JVE5 192 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 UNQ9370/PRO34162Q6UXP9 181 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 GLT6D1Q7Z4J2 308 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 PPP1R27Q86WC6 154 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 MTURNQ8N3F0 131 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 ATP6V1C2Q8NEY4 427 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 PXT1Q8NFP0 134 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 OR51D1Q8NGF3 324 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 RBP7Q96R05 134 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 TEAD3Q99594 435 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 VNN3Q9NY84 501 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 RBM12B-AS1Q9P1G2 102 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 MOKQ9UQ07 419 aa2.48□□□□□ -2.01
SMC6-208ENST00000481708 FARSAQ9Y285 508 aaKnown RBP2.48□□□□□ -2.01
SMC6-208ENST00000481708 IGKV1-27A0A075B6S5 117 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 GNG14A0A1W2PPG7 69 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 HPRT1P00492 218 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 ISG15P05161 165 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 PRSS2P07478 247 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 GUSBP08236 651 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 CXCL3P19876 107 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 PVALBP20472 110 aaPredicted RBP2.47□□□□□ -2.01
SMC6-208ENST00000481708 LINC00205P59089 165 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 LY6DQ14210 128 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 LPAL2Q16609 132 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 C11orf87Q6NUJ2 197 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 SLC51BQ86UW2 128 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 SKA3Q8IX90 412 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 TMEM61Q8N0U2 210 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 OR9G1Q8NH87 305 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 FXYD5Q96DB9 178 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 SNF8Q96H20 258 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms