RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 EGFEM1PQ0D2K5 195 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 PLGLAQ15195 96 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 CCDC58Q4VC31 144 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 TCTEX1D4Q5JR98 221 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 CXorf66Q5JRM2 361 aaPredicted RBP5.64□□□□□ -1.51
COL17A1-205ENST00000480127 LDLRAD2Q5SZI1 272 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 C6orf183Q5T699 404 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 TTC23Q5W5X9 447 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 Q6P435 159 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 TMEM65Q6PI78 240 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 LINC00596Q86U02 117 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 PARP16Q8N5Y8 322 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 ZFP41Q8N8Y5 198 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 OR10V1Q8NGI7 309 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 OR51T1Q8NGJ9 327 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 OR2T10Q8NGZ9 312 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 RHOXF1Q8NHV9 184 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 ABHD5Q8WTS1 349 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 MUL1Q969V5 352 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 NOL4LQ96MY1 436 aaPredicted RBP5.64□□□□□ -1.51
COL17A1-205ENST00000480127 ZNF184Q99676 751 aaPredicted RBP5.64□□□□□ -1.51
COL17A1-205ENST00000480127 MCRIP2Q9BUT9 160 aaKnown RBP5.64□□□□□ -1.51
COL17A1-205ENST00000480127 S100A14Q9HCY8 104 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 ETAA1Q9NY74 926 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 LINC00527Q9UJ94 153 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 PSG11Q9UQ72 335 aa5.64□□□□□ -1.51
COL17A1-205ENST00000480127 TRAV24A0A0B4J272 114 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 A0A1W2PPK0 400 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 AP4M1O00189 453 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 GEMIN2O14893 280 aaKnown RBP5.63□□□□□ -1.51
COL17A1-205ENST00000480127 IGLV1-47P01700 117 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 LMO1P25800 156 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 MAPK3P27361 379 aaPredicted RBP5.63□□□□□ -1.51
COL17A1-205ENST00000480127 CD34P28906 385 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 CAPGP40121 348 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 ETV1P50549 477 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 RBM11P57052 281 aaKnown RBP5.63□□□□□ -1.51
COL17A1-205ENST00000480127 CDK5R1Q15078 307 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 C17orf58Q2M2W7 97 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 MPV17LQ2QL34 196 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 NKAPLQ5M9Q1 402 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 OR2G6Q5TZ20 316 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 ELP2Q6IA86 826 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 TEX38Q6PEX7 206 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 GLIPR1L1Q6UWM5 242 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 SLC16A12Q6ZSM3 486 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 RNF144BQ7Z419 303 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 TGIF2LXQ8IUE1 241 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 DHRSXQ8N5I4 330 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 COMMD1Q8N668 190 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 OR10A7Q8NGE5 316 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 SETD6Q8TBK2 473 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 TFAP2CQ92754 450 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 GHSRQ92847 366 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 SMIM19Q96E16 107 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 TMEM80Q96HE8 168 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 RDH12Q96NR8 316 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 NEDD4LQ96PU5 975 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 SELENOIQ9C0D9 397 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 BABAM2Q9NXR7 383 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 ABRACLQ9P1F3 81 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 PEX16Q9Y5Y5 336 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 DNAH9Q9NYC9 4486 aa5.63□□□□□ -1.51
COL17A1-205ENST00000480127 IGHV1-3A0A0C4DH29 117 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 UBE2QL1A1L167 161 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 EFCAB10A6NFE3 127 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 H3BNX3 289 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 J3QRE1 110 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 FGF16O43320 207 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 TXNL1O43396 289 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 RGS11O94810 467 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 MOSP00540 346 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 OR5H8P0DN80 308 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 MYF6P23409 242 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 SOX6P35712 828 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 GP2P55259 537 aaKnown RBP5.62□□□□□ -1.51
COL17A1-205ENST00000480127 ZP1P60852 638 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 RPL23AP62750 156 aaKnown RBP5.62□□□□□ -1.51
COL17A1-205ENST00000480127 MRPS15P82914 257 aaKnown RBP5.62□□□□□ -1.51
COL17A1-205ENST00000480127 GPR50Q13585 617 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 MMDQ15546 238 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 SMN1Q16637 294 aaKnown RBP5.62□□□□□ -1.51
COL17A1-205ENST00000480127 Q499Y3 187 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 YIF1BQ5BJH7 314 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 SYT6Q5T7P8 510 aaPredicted RBP5.62□□□□□ -1.51
COL17A1-205ENST00000480127 RSBN1Q5VWQ0 802 aaPredicted RBP5.62□□□□□ -1.51
COL17A1-205ENST00000480127 RAB12Q6IQ22 244 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 TRAT1Q6PIZ9 186 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 C8orf86Q6ZUL3 223 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 OR2W3Q7Z3T1 314 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 THNSL2Q86YJ6 484 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 ZNF695Q8IW36 515 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 C8orf59Q8N0T1 100 aaPredicted RBP5.62□□□□□ -1.51
COL17A1-205ENST00000480127 C5orf56Q8N8D9 126 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 OR13C5Q8NGS8 318 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 OR4K15Q8NH41 348 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 PLPPR1Q8TBJ4 325 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 IL1F10Q8WWZ1 152 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 THRSPQ92748 146 aa5.62□□□□□ -1.51
COL17A1-205ENST00000480127 FAM46BQ96A09 425 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms