RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 TRGV10A0A0A0MS01 117 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 A0A1B0GW55 424 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 F2RL2O00254 374 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 SULT1C2O00338 296 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 ITGB1BP1O14713 200 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 XRCC3O43542 346 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 CLPXO76031 633 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 ZNF205O95201 554 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 MT-ND4P03905 459 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 CLEC2LP0C7M8 214 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 DUX4L2P0CJ85 424 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 DUX4L3P0CJ86 424 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 DUX4L4P0CJ87 422 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 DUX4L5P0CJ88 424 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 DUX4L6P0CJ89 424 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 DUX4L7P0CJ90 424 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 ZNF728P0DKX0 622 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 SLC2A2P11168 524 aaPredicted RBP7.29□□□□□ -1.24
DDX56-211ENST00000479602 SELLP14151 372 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 FPR2P25090 351 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 PTBP1P26599 531 aaKnown RBP eCLIP7.29□□□□□ -1.24
DDX56-211ENST00000479602 BLVRBP30043 206 aaPredicted RBP7.29□□□□□ -1.24
DDX56-211ENST00000479602 ACTG1P63261 375 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 LCN2P80188 198 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 MRPS10P82664 201 aaKnown RBP7.29□□□□□ -1.24
DDX56-211ENST00000479602 HOXA4Q00056 320 aaPredicted RBP7.29□□□□□ -1.24
DDX56-211ENST00000479602 GUCA2AQ02747 115 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 MXD1Q05195 221 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 FOXL1Q12952 345 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 HMGN3Q15651 99 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 OR52W1Q6IF63 320 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 DUX4L9Q6RFH8 374 aaPredicted RBP7.29□□□□□ -1.24
DDX56-211ENST00000479602 SHISA2Q6UWI4 295 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 BCL6BQ8N143 479 aaPredicted RBP7.29□□□□□ -1.24
DDX56-211ENST00000479602 BOLLQ8N9W6 283 aaKnown RBP7.29□□□□□ -1.24
DDX56-211ENST00000479602 C19orf18Q8NEA5 215 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 OR5T2Q8NGG2 359 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 DEDD2Q8WXF8 326 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 RAB3CQ96E17 227 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 ZNF714Q96N38 554 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 BANF2Q9H503 90 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 C19orf12Q9NSK7 152 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 DUX4Q9UBX2 424 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 ZNF107Q9UII5 783 aaPredicted RBP7.29□□□□□ -1.24
DDX56-211ENST00000479602 NUP50Q9UKX7 468 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 KCNK7Q9Y2U2 307 aa7.29□□□□□ -1.24
DDX56-211ENST00000479602 KBTBD11-OT1A0A1B0GTJ5 212 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 CCDC160A6NGH7 325 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 SIRPB1O00241 398 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 PAHP00439 452 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 RNASE1P07998 156 aaKnown RBP7.28□□□□□ -1.24
DDX56-211ENST00000479602 GABRR1P24046 479 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 TGFBR1P36897 503 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 ETV6P41212 452 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 CBX5P45973 191 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 CEBPDP49716 269 aaPredicted RBP7.28□□□□□ -1.24
DDX56-211ENST00000479602 EFNB2P52799 333 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 CLDN12P56749 244 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 HTD2P86397 168 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 SSBP1Q04837 148 aaKnown RBP7.28□□□□□ -1.24
DDX56-211ENST00000479602 AANATQ16613 207 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 ZNF260Q3ZCT1 412 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 PLAC9Q5JTB6 97 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 KRBOX4Q5JUW0 171 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 IDNKQ5T6J7 187 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 HACD4Q5VWC8 232 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 TMEM200BQ69YZ2 307 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 Q6ZTK2 550 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 RTN4RL2Q86UN3 420 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 LINC00311Q8N616 119 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 Q8N7P7 452 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 SIGLECL1Q8N7X8 197 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 OR11H6Q8NGC7 330 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 PLPPR1Q8TBJ4 325 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 MRPL30Q8TCC3 161 aaKnown RBP7.28□□□□□ -1.24
DDX56-211ENST00000479602 C22orf15Q8WYQ4 148 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 S100A16Q96FQ6 103 aaKnown RBP7.28□□□□□ -1.24
DDX56-211ENST00000479602 SULT4A1Q9BR01 284 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 NICN1Q9BSH3 213 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 PECRQ9BY49 303 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 PPA2Q9H2U2 334 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 GHITMQ9H3K2 345 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 SCPEP1Q9HB40 452 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 DIABLOQ9NR28 239 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 PLEKHJ1Q9NW61 149 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 PEX16Q9Y5Y5 336 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 AUP1Q9Y679 476 aa7.28□□□□□ -1.24
DDX56-211ENST00000479602 DPPA5A6NC42 116 aa7.27□□□□□ -1.25
DDX56-211ENST00000479602 ODF3BA8MYP8 253 aa7.27□□□□□ -1.25
DDX56-211ENST00000479602 C15orf65H3BRN8 121 aa7.27□□□□□ -1.25
DDX56-211ENST00000479602 CTDSPLO15194 276 aa7.27□□□□□ -1.25
DDX56-211ENST00000479602 SOCS1O15524 211 aa7.27□□□□□ -1.25
DDX56-211ENST00000479602 SNRPBP14678 240 aaKnown RBP7.27□□□□□ -1.25
DDX56-211ENST00000479602 NDUFB7P17568 137 aa7.27□□□□□ -1.25
DDX56-211ENST00000479602 DUSP1P28562 367 aa7.27□□□□□ -1.25
DDX56-211ENST00000479602 KIR2DS4P43632 304 aa7.27□□□□□ -1.25
DDX56-211ENST00000479602 UBE2E1P51965 193 aa7.27□□□□□ -1.25
DDX56-211ENST00000479602 ZNF137PP52743 207 aa7.27□□□□□ -1.25
DDX56-211ENST00000479602 ERVFRD-1P60508 538 aa7.27□□□□□ -1.25
DDX56-211ENST00000479602 LSM3P62310 102 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms