RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 ALDH3A2P51648 485 aa10.43□□□□□ -0.74
VCL-205ENST00000478896 PPP3R1P63098 170 aa10.43□□□□□ -0.74
VCL-205ENST00000478896 PAX5Q02548 391 aa10.43□□□□□ -0.74
VCL-205ENST00000478896 PNLIPRP3Q17RR3 467 aa10.43□□□□□ -0.74
VCL-205ENST00000478896 DEFB136Q30KP8 78 aa10.43□□□□□ -0.74
VCL-205ENST00000478896 TGIF2LXQ8IUE1 241 aa10.43□□□□□ -0.74
VCL-205ENST00000478896 IZUMO1Q8IYV9 350 aa10.43□□□□□ -0.74
VCL-205ENST00000478896 OR5M8Q8NGP6 311 aa10.43□□□□□ -0.74
VCL-205ENST00000478896 OR2T10Q8NGZ9 312 aa10.43□□□□□ -0.74
VCL-205ENST00000478896 RAX2Q96IS3 184 aa10.43□□□□□ -0.74
VCL-205ENST00000478896 EAF1Q96JC9 268 aaPredicted RBP10.43□□□□□ -0.74
VCL-205ENST00000478896 JAM3Q9BX67 310 aa10.43□□□□□ -0.74
VCL-205ENST00000478896 METTL9Q9H1A3 318 aa10.43□□□□□ -0.74
VCL-205ENST00000478896 ABCG5Q9H222 651 aa10.43□□□□□ -0.74
VCL-205ENST00000478896 AMBNQ9NP70 447 aa10.43□□□□□ -0.74
VCL-205ENST00000478896 ERVK13-1Q9NX77 482 aa10.43□□□□□ -0.74
VCL-205ENST00000478896 ING4Q9UNL4 249 aa10.43□□□□□ -0.74
VCL-205ENST00000478896 IGHV3-43A0A0B4J1X8 118 aa10.42□□□□□ -0.74
VCL-205ENST00000478896 LINC01548A6NM66 108 aa10.42□□□□□ -0.74
VCL-205ENST00000478896 E9PI62 339 aa10.42□□□□□ -0.74
VCL-205ENST00000478896 IGHV3-43DP0DP04 118 aa10.42□□□□□ -0.74
VCL-205ENST00000478896 GZMHP20718 246 aa10.42□□□□□ -0.74
VCL-205ENST00000478896 LUMP51884 338 aaPredicted RBP10.42□□□□□ -0.74
VCL-205ENST00000478896 RBM11P57052 281 aaKnown RBP10.42□□□□□ -0.74
VCL-205ENST00000478896 GPR50Q13585 617 aa10.42□□□□□ -0.74
VCL-205ENST00000478896 ATAD3CQ5T2N8 411 aa10.42□□□□□ -0.74
VCL-205ENST00000478896 C9orf66Q5T8R8 295 aa10.42□□□□□ -0.74
VCL-205ENST00000478896 DDI2Q5TDH0 399 aa10.42□□□□□ -0.74
VCL-205ENST00000478896 LCNL1Q6ZST4 164 aa10.42□□□□□ -0.74
VCL-205ENST00000478896 UBALD1Q8TB05 177 aa10.42□□□□□ -0.74
VCL-205ENST00000478896 ARL11Q969Q4 196 aa10.42□□□□□ -0.74
VCL-205ENST00000478896 Q96MT0 163 aa10.42□□□□□ -0.74
VCL-205ENST00000478896 RASL11BQ9BPW5 248 aa10.42□□□□□ -0.74
VCL-205ENST00000478896 DCLRE1BQ9H816 532 aa10.42□□□□□ -0.74
VCL-205ENST00000478896 ZNF581Q9P0T4 197 aa10.42□□□□□ -0.74
VCL-205ENST00000478896 KMT2CQ8NEZ4 4911 aaKnown RBP10.42□□□□□ -0.74
VCL-205ENST00000478896 AIPO00170 330 aa10.41□□□□□ -0.74
VCL-205ENST00000478896 GEMIN2O14893 280 aaKnown RBP10.41□□□□□ -0.74
VCL-205ENST00000478896 MOSP00540 346 aa10.41□□□□□ -0.74
VCL-205ENST00000478896 VDAC1P21796 283 aa10.41□□□□□ -0.74
VCL-205ENST00000478896 ZNF93P35789 620 aaPredicted RBP10.41□□□□□ -0.74
VCL-205ENST00000478896 ECI1P42126 302 aa10.41□□□□□ -0.74
VCL-205ENST00000478896 GTF2A1P52655 376 aaPredicted RBP10.41□□□□□ -0.74
VCL-205ENST00000478896 RAB40BQ12829 278 aa10.41□□□□□ -0.74
VCL-205ENST00000478896 EBI3Q14213 229 aa10.41□□□□□ -0.74
VCL-205ENST00000478896 LINC00596Q86U02 117 aa10.41□□□□□ -0.74
VCL-205ENST00000478896 Q8N9W7 124 aa10.41□□□□□ -0.74
VCL-205ENST00000478896 OR52N1Q8NH53 320 aa10.41□□□□□ -0.74
VCL-205ENST00000478896 GPR148Q8TDV2 347 aa10.41□□□□□ -0.74
VCL-205ENST00000478896 CCDC107Q8WV48 283 aa10.41□□□□□ -0.74
VCL-205ENST00000478896 TMEM106AQ96A25 262 aa10.41□□□□□ -0.74
VCL-205ENST00000478896 PRR25Q96S07 402 aa10.41□□□□□ -0.74
VCL-205ENST00000478896 PAK1IP1Q9NWT1 392 aaPredicted RBP10.41□□□□□ -0.74
VCL-205ENST00000478896 GFOD1Q9NXC2 390 aa10.41□□□□□ -0.74
VCL-205ENST00000478896 U3KQK5 164 aa10.41□□□□□ -0.74
VCL-205ENST00000478896 ELANEP08246 267 aa10.4□□□□□ -0.74
VCL-205ENST00000478896 NHLRC4P0CG21 123 aaPredicted RBP10.4□□□□□ -0.74
VCL-205ENST00000478896 GABRB1P18505 474 aa10.4□□□□□ -0.74
VCL-205ENST00000478896 FOXE3Q13461 319 aa10.4□□□□□ -0.74
VCL-205ENST00000478896 MPV17LQ2QL34 196 aa10.4□□□□□ -0.74
VCL-205ENST00000478896 ZNF529Q6P280 563 aa10.4□□□□□ -0.74
VCL-205ENST00000478896 STX19Q8N4C7 294 aa10.4□□□□□ -0.74
VCL-205ENST00000478896 CBR4Q8N4T8 237 aa10.4□□□□□ -0.74
VCL-205ENST00000478896 LINC00311Q8N616 119 aa10.4□□□□□ -0.74
VCL-205ENST00000478896 Q8N6K4 173 aa10.4□□□□□ -0.74
VCL-205ENST00000478896 Q8NFD4 153 aa10.4□□□□□ -0.74
VCL-205ENST00000478896 OR52M1Q8NGK5 317 aa10.4□□□□□ -0.74
VCL-205ENST00000478896 OR52I1Q8NGK6 324 aa10.4□□□□□ -0.74
VCL-205ENST00000478896 RTN4IP1Q8WWV3 396 aaPredicted RBP10.4□□□□□ -0.74
VCL-205ENST00000478896 S1PR3Q99500 378 aa10.4□□□□□ -0.74
VCL-205ENST00000478896 IFT22Q9H7X7 185 aa10.4□□□□□ -0.74
VCL-205ENST00000478896 TMEM138Q9NPI0 162 aa10.4□□□□□ -0.74
VCL-205ENST00000478896 IL36GQ9NZH8 169 aa10.4□□□□□ -0.74
VCL-205ENST00000478896 RPL36Q9Y3U8 105 aaKnown RBP10.4□□□□□ -0.74
VCL-205ENST00000478896 SIRT4Q9Y6E7 314 aaPredicted RBP10.4□□□□□ -0.74
VCL-205ENST00000478896 SEC14L6B5MCN3 397 aa10.39□□□□□ -0.75
VCL-205ENST00000478896 C15orf65H3BRN8 121 aa10.39□□□□□ -0.75
VCL-205ENST00000478896 TXNL1O43396 289 aa10.39□□□□□ -0.75
VCL-205ENST00000478896 ORC5O43913 435 aa10.39□□□□□ -0.75
VCL-205ENST00000478896 ZNF780AO75290 641 aaPredicted RBP10.39□□□□□ -0.75
VCL-205ENST00000478896 CD1BP29016 333 aa10.39□□□□□ -0.75
VCL-205ENST00000478896 BDKRB2P30411 391 aa10.39□□□□□ -0.75
VCL-205ENST00000478896 SOX6P35712 828 aa10.39□□□□□ -0.75
VCL-205ENST00000478896 KIR2DS1Q14954 304 aa10.39□□□□□ -0.75
VCL-205ENST00000478896 SLC22A6Q4U2R8 563 aa10.39□□□□□ -0.75
VCL-205ENST00000478896 NHLRC3Q5JS37 347 aa10.39□□□□□ -0.75
VCL-205ENST00000478896 ASCL4Q6XD76 172 aa10.39□□□□□ -0.75
VCL-205ENST00000478896 PRR18Q8N4B5 295 aa10.39□□□□□ -0.75
VCL-205ENST00000478896 C4orf3Q8WVX3 66 aa10.39□□□□□ -0.75
VCL-205ENST00000478896 RGP1Q92546 391 aaPredicted RBP10.39□□□□□ -0.75
VCL-205ENST00000478896 RAB9BQ9NP90 201 aa10.39□□□□□ -0.75
VCL-205ENST00000478896 GNG12Q9UBI6 72 aa10.39□□□□□ -0.75
VCL-205ENST00000478896 TRAPPC2LQ9UL33 140 aa10.39□□□□□ -0.75
VCL-205ENST00000478896 DYNC1I1O14576 645 aa10.38□□□□□ -0.75
VCL-205ENST00000478896 SPINT2O43291 252 aa10.38□□□□□ -0.75
VCL-205ENST00000478896 LY86O95711 162 aa10.38□□□□□ -0.75
VCL-205ENST00000478896 GTF2F2P13984 249 aa10.38□□□□□ -0.75
VCL-205ENST00000478896 CDX1P47902 265 aaPredicted RBP10.38□□□□□ -0.75
VCL-205ENST00000478896 RIPK1Q13546 671 aa10.38□□□□□ -0.75
VCL-205ENST00000478896 ZNF260Q3ZCT1 412 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms