RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 GDNFP39905 211 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 VEGFCP49767 419 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 SLC9A3R2Q15599 337 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 C17orf58Q2M2W7 97 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 C2orf76Q3KRA6 126 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 TIMM50Q3ZCQ8 353 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 PLA1AQ53H76 456 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 SLC35E4Q6ICL7 350 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 HEPN1Q6WQI6 88 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 ZNF497Q6ZNH5 498 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 OR2W3Q7Z3T1 314 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 C6orf201Q7Z4U5 140 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 PRR18Q8N4B5 295 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 ZDHHC22Q8N966 263 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 ZNF565Q8N9K5 539 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 OR4K15Q8NH41 348 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 RFESDQ8TAC1 157 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 TMEM158Q8WZ71 300 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 CORO2AQ92828 525 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 MDFIQ99750 246 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 SULT4A1Q9BR01 284 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 URM1Q9BTM9 101 aaKnown RBP5.62□□□□□ -1.51
BRCA1-215ENST00000478531 CLEC7AQ9BXN2 247 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 TMEM133Q9H2Q1 129 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 TAS2R3Q9NYW6 316 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 DAPK2Q9UIK4 370 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 TRAPPC2LQ9UL33 140 aa5.62□□□□□ -1.51
BRCA1-215ENST00000478531 KBTBD11-OT1A0A1B0GTJ5 212 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 NOTOA8MTQ0 251 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 FAM25EA8MYX2 175 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 TRIM77I1YAP6 450 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 SOCS1O15524 211 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 IL1AP01583 271 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 MELTFP08582 738 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 CD37P11049 281 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 ATF4P18848 351 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-215ENST00000478531 CHATP28329 748 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 EFNB2P52799 333 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 UBA52P62987 128 aaKnown RBP5.61□□□□□ -1.51
BRCA1-215ENST00000478531 ACTG1P63261 375 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 PAX5Q02548 391 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 KRTAP21-3Q3LHN1 58 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 MIDNQ504T8 468 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 SFXN4Q6P4A7 337 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 LHFPL4Q7Z7J7 247 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 TPRA1Q86W33 373 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-215ENST00000478531 NDNFQ8TB73 568 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 LEAP2Q969E1 77 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 YIPF6Q96EC8 236 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 KIRREL1Q96J84 757 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 FAAP24Q9BTP7 215 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 C19orf24Q9BVV8 132 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 TM2D1Q9BX74 207 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 MRPS26Q9BYN8 205 aaKnown RBP5.61□□□□□ -1.51
BRCA1-215ENST00000478531 LPAR5Q9H1C0 372 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 CHMP1AQ9HD42 196 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-215ENST00000478531 PLEKHJ1Q9NW61 149 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 ZNRD1Q9P1U0 126 aa5.61□□□□□ -1.51
BRCA1-215ENST00000478531 A0A075B6Q4 140 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 IGHV3-43A0A0B4J1X8 118 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 ODF3BA8MYP8 253 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 H3BUI4 141 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 IGHV4-59P01825 116 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 IGHV3-43DP0DP04 118 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 SNRPBP14678 240 aaKnown RBP5.6□□□□□ -1.51
BRCA1-215ENST00000478531 JUNBP17275 347 aaPredicted RBP5.6□□□□□ -1.51
BRCA1-215ENST00000478531 RCC1P18754 421 aaPredicted RBP5.6□□□□□ -1.51
BRCA1-215ENST00000478531 RANBP1P43487 201 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 GNG10P50151 68 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 UTF1Q5T230 341 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 ZNF626Q68DY1 528 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 OR52W1Q6IF63 320 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 Q6YL49 198 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 ABHD12Q8N2K0 398 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 OR56B1Q8NGI3 324 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 OR13F1Q8NGS4 319 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 SETD6Q8TBK2 473 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 LGALS14Q8TCE9 139 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 SSMEM1Q8WWF3 244 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 ARL11Q969Q4 196 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 ARHGAP5-AS1Q96IT6 56 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 FUNDC2Q9BWH2 189 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 ZNF286AQ9HBT8 521 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 IDI2-AS1Q9NZ38 188 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 RAB22AQ9UL26 194 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 BTBD17A6NE02 478 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 TOR1AO14656 332 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 MT-ND4P03905 459 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 SSX2Q16385 188 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 TUSC1Q2TAM9 212 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 MOGAT2Q3SYC2 334 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 C6orf183Q5T699 404 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 IDNKQ5T6J7 187 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 MZT2AQ6P582 158 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 OR11H6Q8NGC7 330 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 MRPL30Q8TCC3 161 aaKnown RBP5.6□□□□□ -1.51
BRCA1-215ENST00000478531 TAF15Q92804 592 aaKnown RBP eCLIP5.6□□□□□ -1.516e-6■□□□□ 11.2
BRCA1-215ENST00000478531 HDHD3Q9BSH5 251 aaPredicted RBP5.6□□□□□ -1.51
BRCA1-215ENST00000478531 CHIAQ9BZP6 476 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms