RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	ZSCAN12	O43309	604 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	OR2T1	O43869	369 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	RAMP3	O60896	148 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	IGF2	P01344	180 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	BGLAP	P02818	100 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	DBI	P07108	87 aa	Known RBP	3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	LINC00032	P0C843	101 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	PGA4	P0DJD7	388 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	PGA3	P0DJD8	388 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	NQO1	P15559	274 aa	Known RBP	3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	RPA2	P15927	270 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	ZNF32	P17041	273 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	HPCAL1	P37235	193 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	GDI2	P50395	445 aa	Known RBP	3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	RND3	P61587	244 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	COPZ1	P61923	177 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	BLCAP	P62952	87 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	ERVK-25	P63136	954 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	ELF3	P78545	371 aa	Predicted RBP	3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	CXCL6	P80162	114 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	HPCA	P84074	193 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	PSG4	Q00888	419 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	HIST3H3	Q16695	136 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	CYP51A1	Q16850	503 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	LRRC75B	Q2VPJ9	315 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	CLEC12A	Q5QGZ9	265 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	ATAD3B	Q5T9A4	648 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	HCP5	Q6MZN7	132 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	DPPA2	Q7Z7J5	298 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	RIMKLA	Q8IXN7	391 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	LINC01561	Q8N1V8	128 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	C10orf111	Q8N326	155 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	LY6G5B	Q8NDX9	201 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	OR51G2	Q8NGK0	314 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	OR6X1	Q8NH79	312 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	CNIH3	Q8TBE1	160 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	SPRYD4	Q8WW59	207 aa	Predicted RBP	3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	TRNT1	Q96Q11	434 aa	Known RBP	3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	ALG12	Q9BV10	488 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	DPY30	Q9C005	99 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	RAB18	Q9NP72	206 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	TMEM216	Q9P0N5	145 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	ONECUT1	Q9UBC0	465 aa		3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	TSSC4	Q9Y5U2	329 aa	Predicted RBP	3.18	□□□□□ -1.9
PRKD3-208	ENST00000475912	IGKV1D-43	A0A0B4J1Z2	117 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	EXOC1L	A0A1B0GW35	172 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	PLPP3	O14495	311 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	ENTPD5	O75356	428 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	CLIC3	O95833	236 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	GYPA	P02724	150 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	HLA-DPB1	P04440	258 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	TAC1	P20366	129 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	GSTM3	P21266	225 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	VDAC2	P45880	294 aa	Predicted RBP	3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	SRP9	P49458	86 aa	Known RBP	3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	RAB13	P51153	203 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	UBE2E1	P51965	193 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	SLC25A1	P53007	311 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	IL5RA	Q01344	420 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	EWSR1	Q01844	656 aa	Known RBP eCLIP	3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	BDH1	Q02338	343 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	MAB21L1	Q13394	359 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	SELPLG	Q14242	412 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	MPPED2	Q15777	294 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	AANAT	Q16613	207 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	C9orf129	Q5T035	196 aa	Known RBP	3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	PRAMEF6	Q5VXH4	476 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	PVRIG	Q6DKI7	326 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	OR4F3	Q6IEY1	312 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	PYHIN1	Q6K0P9	492 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	UNQ9370/PRO34162	Q6UXP9	181 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	SLC35D2	Q76EJ3	337 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	RPP25L	Q8N5L8	163 aa	Known RBP	3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	CCNYL1	Q8N7R7	359 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	OR2T33	Q8NG76	320 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	OR4A15	Q8NGL6	344 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	SLC38A4	Q969I6	547 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	HAVCR1	Q96D42	359 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	CMBL	Q96DG6	245 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	MAGEB18	Q96M61	343 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	C1orf50	Q9BV19	199 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	OR2H1	Q9GZK4	316 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	SNX12	Q9UMY4	172 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	STARD10	Q9Y365	291 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	TMED5	Q9Y3A6	229 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	FIS1	Q9Y3D6	152 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	UGT2A1	Q9Y4X1	527 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	DNAJC15	Q9Y5T4	150 aa		3.17	□□□□□ -1.9
PRKD3-208	ENST00000475912	PKD1	P98161	4303 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912		A0A1B0GWA3	101 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912		A6NDX4	124 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912		K7EQM0	130 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	NEFH	P12036	1026 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	PGAM2	P15259	253 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	PRPS1L1	P21108	318 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	CHI3L1	P36222	383 aa	Predicted RBP	3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	RGS6	P49758	472 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	FMOD	Q06828	376 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	GNA13	Q14344	377 aa		3.16	□□□□□ -1.9
PRKD3-208	ENST00000475912	TATDN3	Q17R31	274 aa		3.16	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms