RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 OPALINQ96PE5 141 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 MBOAT4Q96T53 435 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 FAM192AQ9GZU8 254 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 PLSCR3Q9NRY6 295 aa5.27□□□□□ -1.57
HDAC1-204ENST00000471488 SHISA3A0PJX4 238 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 CCDC182A6NF36 153 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 A8MZ25 164 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 M0R129 80 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 SLC31A2O15432 143 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 SRSF10O75494 262 aaKnown RBP5.26□□□□□ -1.57
HDAC1-204ENST00000471488 RGS11O94810 467 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 CSN2P05814 226 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 SLC2A5P22732 501 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 PPIFP30405 207 aaKnown RBP5.26□□□□□ -1.57
HDAC1-204ENST00000471488 SYNJ2BPP57105 145 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 ACTBP60709 375 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 GUCA2BQ16661 112 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 ZSCAN26Q16670 478 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 LRRC36Q1X8D7 754 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 LCN12Q6JVE5 192 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 LIN54Q6MZP7 749 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 Q6P435 159 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 DEFB125Q8N687 156 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 OR8H1Q8NGG4 311 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 OR13C9Q8NGT0 318 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 OR10K1Q8NGX5 313 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 PLPPR1Q8TBJ4 325 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 MYOZ3Q8TDC0 251 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 PP6455Q8WZ26 134 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 ADAT3Q96EY9 351 aaPredicted RBP5.26□□□□□ -1.57
HDAC1-204ENST00000471488 CLCC1Q96S66 551 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 GPER1Q99527 375 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 ANKRD60Q9BZ19 345 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 COMMD4Q9H0A8 199 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 WFDC10AQ9H1F0 79 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 SRD5A3Q9H8P0 318 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 ETAA1Q9NY74 926 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 SIGLEC8Q9NYZ4 499 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 GNG12Q9UBI6 72 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 MRM2Q9UI43 246 aaKnown RBP5.26□□□□□ -1.57
HDAC1-204ENST00000471488 GNG8Q9UK08 70 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 FOXA2Q9Y261 457 aaPredicted RBP5.26□□□□□ -1.57
HDAC1-204ENST00000471488 SELENOKQ9Y6D0 94 aa5.26□□□□□ -1.57
HDAC1-204ENST00000471488 HECTD4Q9Y4D8 3996 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 IGHV7-81A0A0B4J1V7 117 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 IGKV1-9A0A0C4DH69 117 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 C13orf42A0A1B0GVH6 325 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 IZUMO1RA6ND01 250 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 NUPR2A6NF83 97 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 KDM4BO94953 1096 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 CST1P01037 141 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 IGLV1-40P01703 118 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 TRGV3P03979 118 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 OSMP13725 252 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 ATP6V1B2P21281 511 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 CCL1P22362 96 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 PRKACGP22612 351 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 ATP6V1E1P36543 226 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 KIR3DL2P43630 455 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 DEFA5Q01523 94 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 GALEQ14376 348 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 FAM98BQ52LJ0 330 aaKnown RBP5.25□□□□□ -1.57
HDAC1-204ENST00000471488 ACTBL2Q562R1 376 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 ATAD3CQ5T2N8 411 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 FAHD1Q6P587 224 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 UNQ5815/PRO19632Q6UWF5 114 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 SSX6Q7RTT6 188 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 FAM220AQ7Z4H9 259 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 TMEM104Q8NE00 496 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 OR10H4Q8NGA5 316 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 OR51T1Q8NGJ9 327 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 OR13C3Q8NGS6 347 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 OR10AC1Q8NH08 325 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 CNIH3Q8TBE1 160 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 KCTD12Q96CX2 325 aaKnown RBP5.25□□□□□ -1.57
HDAC1-204ENST00000471488 LRGUKQ96M69 825 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 NABP2Q9BQ15 211 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 NEURL2Q9BR09 285 aa5.25□□□□□ -1.57
HDAC1-204ENST00000471488 FAM103A1Q9BTL3 118 aaKnown RBP5.25□□□□□ -1.57
HDAC1-204ENST00000471488 SEBOXQ9HB31 216 aaPredicted RBP5.25□□□□□ -1.57
HDAC1-204ENST00000471488 KLK5Q9Y337 293 aaPredicted RBP5.25□□□□□ -1.57
HDAC1-204ENST00000471488 A0A0J9YWU9 116 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 METTL15A6NJ78 407 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 NBR2O15453 112 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 SOX15O60248 233 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 MITFO75030 526 aaPredicted RBP5.24□□□□□ -1.57
HDAC1-204ENST00000471488 HTR3BO95264 441 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 TFAP2AP05549 437 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 UBCP0CG48 685 aaKnown RBP5.24□□□□□ -1.57
HDAC1-204ENST00000471488 CGB3P0DN86 165 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 CGB7P0DN87 165 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 HSD17B1P14061 328 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 CDK5Q00535 292 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 TMEM267Q0VDI3 215 aaPredicted RBP5.24□□□□□ -1.57
HDAC1-204ENST00000471488 LSAMPQ13449 338 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 CDK5R1Q15078 307 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 RSU1Q15404 277 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 PIGYQ3MUY2 71 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 TP53I3Q53FA7 332 aa5.24□□□□□ -1.57
HDAC1-204ENST00000471488 RSBN1Q5VWQ0 802 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms