RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 WNK2Q9Y3S1 2297 aa9.27□□□□□ -0.93
SREBF1-209ENST00000470247 CR1P17927 2039 aa9.27□□□□□ -0.93
SREBF1-209ENST00000470247 CSPG4Q6UVK1 2322 aa9.27□□□□□ -0.93
SREBF1-209ENST00000470247 IGKV1-6A0A0C4DH72 117 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 KIR2DS1A0A191URI9 304 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 hADV38S2A0JD32 116 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 C12orf77C9JDV5 145 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 NPIPB11E5RHQ5 1161 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 H7C1Q1 480 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 FOXH1O75593 365 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 RBBP9O75884 186 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 MMP23AO75900 390 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 SCTP09683 121 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 GSTT2P0CG29 244 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 GSTT2BP0CG30 244 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 CCL3L1P16619 93 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 GZMHP20718 246 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 CD40LGP29965 261 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 GDNFP39905 211 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 CBX5P45973 191 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 ERVFRD-1P60508 538 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 LCN2P80188 198 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 IFITM3Q01628 133 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 HERPUD1Q15011 391 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 OR52W1Q6IF63 320 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 WDR12Q9GZL7 423 aaKnown RBP9.26□□□□□ -0.93
SREBF1-209ENST00000470247 TAF9BQ9HBM6 251 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 CHMP1AQ9HD42 196 aaPredicted RBP9.26□□□□□ -0.93
SREBF1-209ENST00000470247 OR6C3Q9NZP0 311 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 TRAPPC2LQ9UL33 140 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 UBE2J1Q9Y385 318 aaPredicted RBP9.26□□□□□ -0.93
SREBF1-209ENST00000470247 ABCA1O95477 2261 aa9.26□□□□□ -0.93
SREBF1-209ENST00000470247 VPS13CQ709C8 3753 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 PPIAL4CA0A0B4J2A2 164 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 KBTBD11-OT1A0A1B0GTJ5 212 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 C17orf98A8MV24 154 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 TRDCB7Z8K6 153 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 ZNF728P0DKX0 622 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 PPIAL4GP0DN37 164 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 IGHV4-31P0DP07 118 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 SSTR5P35346 364 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 GLP1RP43220 463 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 SSBP1Q04837 148 aaKnown RBP9.25□□□□□ -0.93
SREBF1-209ENST00000470247 TMEM249Q2WGJ8 235 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 UTF1Q5T230 341 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 CD276Q5ZPR3 534 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 FAM53AQ6NSI3 398 aaPredicted RBP9.25□□□□□ -0.93
SREBF1-209ENST00000470247 MOB1BQ7L9L4 216 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 ZNF554Q86TJ5 538 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 FAM185AQ8N0U4 392 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 Q8N7P7 452 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 ZNF565Q8N9K5 539 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 BEST4Q8NFU0 473 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 OR1L1Q8NH94 360 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 UBALD1Q8TB05 177 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 SETD6Q8TBK2 473 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 DMRTB1Q96MA1 342 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 CCDC32Q9BV29 185 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 LPAR2Q9HBW0 351 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 TAS2R3Q9NYW6 316 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 LPAR3Q9UBY5 353 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 OPN4Q9UHM6 478 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 ITPR3Q14573 2671 aa9.25□□□□□ -0.93
SREBF1-209ENST00000470247 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.25□□□□□ -0.938e-8■■■■□ 20.2
SREBF1-209ENST00000470247 TRGV10A0A0A0MS01 117 aa9.24□□□□□ -0.93
SREBF1-209ENST00000470247 IGHV2-70DA0A0C4DH43 119 aa9.24□□□□□ -0.93
SREBF1-209ENST00000470247 ANKRD20A5PA0PJZ0 165 aa9.24□□□□□ -0.93
SREBF1-209ENST00000470247 ZNF729A6NN14 1252 aaPredicted RBP9.24□□□□□ -0.93
SREBF1-209ENST00000470247 B4DSR2 109 aa9.24□□□□□ -0.93
SREBF1-209ENST00000470247 F2RL2O00254 374 aa9.24□□□□□ -0.93
SREBF1-209ENST00000470247 FABP7O15540 132 aa9.24□□□□□ -0.93
SREBF1-209ENST00000470247 HBZP02008 142 aa9.24□□□□□ -0.93
SREBF1-209ENST00000470247 CD74P04233 296 aa9.24□□□□□ -0.93
SREBF1-209ENST00000470247 HEXAP06865 529 aa9.24□□□□□ -0.93
SREBF1-209ENST00000470247 IL7P13232 177 aa9.24□□□□□ -0.93
SREBF1-209ENST00000470247 RCVRNP35243 200 aa9.24□□□□□ -0.93
SREBF1-209ENST00000470247 LOXL3P58215 753 aa9.24□□□□□ -0.93
SREBF1-209ENST00000470247 HLA-DRB3P79483 266 aa9.24□□□□□ -0.93
SREBF1-209ENST00000470247 MRPS15P82914 257 aaKnown RBP9.24□□□□□ -0.93
SREBF1-209ENST00000470247 PAX8Q06710 450 aa9.24□□□□□ -0.93
SREBF1-209ENST00000470247 KLF9Q13886 244 aaPredicted RBP9.24□□□□□ -0.93
SREBF1-209ENST00000470247 C6orf183Q5T699 404 aa9.24□□□□□ -0.93
SREBF1-209ENST00000470247 TMEM229BQ8NBD8 167 aa9.24□□□□□ -0.93
SREBF1-209ENST00000470247 RFESDQ8TAC1 157 aa9.24□□□□□ -0.93
SREBF1-209ENST00000470247 ARL11Q969Q4 196 aa9.24□□□□□ -0.93
SREBF1-209ENST00000470247 MSI2Q96DH6 328 aaKnown RBP9.24□□□□□ -0.93
SREBF1-209ENST00000470247 ZNF286AQ9HBT8 521 aa9.24□□□□□ -0.93
SREBF1-209ENST00000470247 CALYQ9NYX4 217 aa9.24□□□□□ -0.93
SREBF1-209ENST00000470247 ZNF107Q9UII5 783 aaPredicted RBP9.24□□□□□ -0.93
SREBF1-209ENST00000470247 ANXA10Q9UJ72 324 aa9.24□□□□□ -0.93
SREBF1-209ENST00000470247 MGAT4AQ9UM21 535 aa9.24□□□□□ -0.93
SREBF1-209ENST00000470247 INSIG2Q9Y5U4 225 aa9.24□□□□□ -0.93
SREBF1-209ENST00000470247 ACANP16112 2415 aa9.24□□□□□ -0.93
SREBF1-209ENST00000470247 A0A1W2PQ09 198 aa9.23□□□□□ -0.93
SREBF1-209ENST00000470247 ENSAO43768 121 aaKnown RBP9.23□□□□□ -0.93
SREBF1-209ENST00000470247 LIPFP07098 398 aa9.23□□□□□ -0.93
SREBF1-209ENST00000470247 MSMBP08118 114 aa9.23□□□□□ -0.93
SREBF1-209ENST00000470247 MMP9P14780 707 aa9.23□□□□□ -0.93
SREBF1-209ENST00000470247 OMGP23515 440 aa9.23□□□□□ -0.93
SREBF1-209ENST00000470247 HLA-DMAP28067 261 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms