RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 BDKRB2P30411 391 aa13.82□□□□□ -0.2
COL7A1-208ENST00000470076 THBS3P49746 956 aa13.82□□□□□ -0.2
COL7A1-208ENST00000470076 KRTAP10-11P60412 298 aa13.82□□□□□ -0.2
COL7A1-208ENST00000470076 EBI3Q14213 229 aa13.82□□□□□ -0.2
COL7A1-208ENST00000470076 MPV17LQ2QL34 196 aa13.82□□□□□ -0.2
COL7A1-208ENST00000470076 OR2W3Q7Z3T1 314 aa13.82□□□□□ -0.2
COL7A1-208ENST00000470076 SLC35E3Q7Z769 313 aa13.82□□□□□ -0.2
COL7A1-208ENST00000470076 FOXRED2Q8IWF2 684 aa13.82□□□□□ -0.2
COL7A1-208ENST00000470076 PQLC1Q8N2U9 271 aa13.82□□□□□ -0.2
COL7A1-208ENST00000470076 MCRIP2Q9BUT9 160 aaKnown RBP13.82□□□□□ -0.2
COL7A1-208ENST00000470076 S100A14Q9HCY8 104 aa13.82□□□□□ -0.2
COL7A1-208ENST00000470076 ZNF581Q9P0T4 197 aa13.82□□□□□ -0.2
COL7A1-208ENST00000470076 IGHV1-3A0A0C4DH29 117 aa13.81□□□□□ -0.2
COL7A1-208ENST00000470076 A0A1W2PPE3 182 aa13.81□□□□□ -0.2
COL7A1-208ENST00000470076 WI2-2373I1.2A0A1W2PRP0 233 aa13.81□□□□□ -0.2
COL7A1-208ENST00000470076 CCRL2O00421 344 aa13.81□□□□□ -0.2
COL7A1-208ENST00000470076 GEMIN2O14893 280 aaKnown RBP13.81□□□□□ -0.2
COL7A1-208ENST00000470076 WBP4O75554 376 aaKnown RBP13.81□□□□□ -0.2
COL7A1-208ENST00000470076 SERPINA2P20848 420 aa13.81□□□□□ -0.2
COL7A1-208ENST00000470076 ETV1P50549 477 aa13.81□□□□□ -0.2
COL7A1-208ENST00000470076 SMN1Q16637 294 aaKnown RBP13.81□□□□□ -0.2
COL7A1-208ENST00000470076 DEFB121Q5J5C9 76 aa13.81□□□□□ -0.2
COL7A1-208ENST00000470076 VAX1Q5SQQ9 334 aa13.81□□□□□ -0.2
COL7A1-208ENST00000470076 MOB3BQ86TA1 216 aa13.81□□□□□ -0.2
COL7A1-208ENST00000470076 IZUMO1Q8IYV9 350 aa13.81□□□□□ -0.2
COL7A1-208ENST00000470076 LINC00311Q8N616 119 aa13.81□□□□□ -0.2
COL7A1-208ENST00000470076 C8orf31Q8N9H6 132 aa13.81□□□□□ -0.2
COL7A1-208ENST00000470076 ZNF555Q8NEP9 628 aa13.81□□□□□ -0.2
COL7A1-208ENST00000470076 ARL11Q969Q4 196 aa13.81□□□□□ -0.2
COL7A1-208ENST00000470076 SMIM19Q96E16 107 aa13.81□□□□□ -0.2
COL7A1-208ENST00000470076 IRGMA1A4Y4 181 aa13.8□□□□□ -0.2
COL7A1-208ENST00000470076 NUDT19A8MXV4 375 aa13.8□□□□□ -0.2
COL7A1-208ENST00000470076 C15orf65H3BRN8 121 aa13.8□□□□□ -0.2
COL7A1-208ENST00000470076 SDCBPO00560 298 aaPredicted RBP13.8□□□□□ -0.2
COL7A1-208ENST00000470076 OGG1O15527 345 aa13.8□□□□□ -0.2
COL7A1-208ENST00000470076 ORC5O43913 435 aa13.8□□□□□ -0.2
COL7A1-208ENST00000470076 HOXD3P31249 432 aaPredicted RBP13.8□□□□□ -0.2
COL7A1-208ENST00000470076 MYCNOSP40205 109 aa13.8□□□□□ -0.2
COL7A1-208ENST00000470076 RIPK1Q13546 671 aa13.8□□□□□ -0.2
COL7A1-208ENST00000470076 ATAD3CQ5T2N8 411 aa13.8□□□□□ -0.2
COL7A1-208ENST00000470076 OR2G6Q5TZ20 316 aa13.8□□□□□ -0.2
COL7A1-208ENST00000470076 C8orf86Q6ZUL3 223 aa13.8□□□□□ -0.2
COL7A1-208ENST00000470076 TGIF2LXQ8IUE1 241 aa13.8□□□□□ -0.2
COL7A1-208ENST00000470076 STPG2Q8N412 459 aa13.8□□□□□ -0.2
COL7A1-208ENST00000470076 OR2T10Q8NGZ9 312 aa13.8□□□□□ -0.2
COL7A1-208ENST00000470076 NEK7Q8TDX7 302 aa13.8□□□□□ -0.2
COL7A1-208ENST00000470076 EAF1Q96JC9 268 aaPredicted RBP13.8□□□□□ -0.2
COL7A1-208ENST00000470076 RDH12Q96NR8 316 aa13.8□□□□□ -0.2
COL7A1-208ENST00000470076 BABAM2Q9NXR7 383 aa13.8□□□□□ -0.2
COL7A1-208ENST00000470076 LINC00527Q9UJ94 153 aa13.8□□□□□ -0.2
COL7A1-208ENST00000470076 NBEAL2Q6ZNJ1 2754 aa13.8□□□□□ -0.2
COL7A1-208ENST00000470076 NCBP2LA6PVI3 153 aaKnown RBP13.79□□□□□ -0.2
COL7A1-208ENST00000470076 AP4M1O00189 453 aa13.79□□□□□ -0.2
COL7A1-208ENST00000470076 GTF2F2P13984 249 aa13.79□□□□□ -0.2
COL7A1-208ENST00000470076 MYL12AP19105 171 aa13.79□□□□□ -0.2
COL7A1-208ENST00000470076 IL3RAP26951 378 aa13.79□□□□□ -0.2
COL7A1-208ENST00000470076 REG1BP48304 166 aa13.79□□□□□ -0.2
COL7A1-208ENST00000470076 GPR176Q14439 515 aa13.79□□□□□ -0.2
COL7A1-208ENST00000470076 Q3ZCU0 254 aa13.79□□□□□ -0.2
COL7A1-208ENST00000470076 SLC22A6Q4U2R8 563 aa13.79□□□□□ -0.2
COL7A1-208ENST00000470076 ZNF497Q6ZNH5 498 aa13.79□□□□□ -0.2
COL7A1-208ENST00000470076 STX19Q8N4C7 294 aa13.79□□□□□ -0.2
COL7A1-208ENST00000470076 Q8N6K4 173 aa13.79□□□□□ -0.2
COL7A1-208ENST00000470076 KLHL30-AS1Q8NEE0 82 aa13.79□□□□□ -0.2
COL7A1-208ENST00000470076 ZNF184Q99676 751 aaPredicted RBP13.79□□□□□ -0.2
COL7A1-208ENST00000470076 SPACA1Q9HBV2 294 aa13.79□□□□□ -0.2
COL7A1-208ENST00000470076 RAB9BQ9NP90 201 aa13.79□□□□□ -0.2
COL7A1-208ENST00000470076 LIN7CQ9NUP9 197 aaKnown RBP13.79□□□□□ -0.2
COL7A1-208ENST00000470076 GFOD1Q9NXC2 390 aa13.79□□□□□ -0.2
COL7A1-208ENST00000470076 SMPD3Q9NY59 655 aaPredicted RBP13.79□□□□□ -0.2
COL7A1-208ENST00000470076 CKLFQ9UBR5 152 aa13.79□□□□□ -0.2
COL7A1-208ENST00000470076 DIMT1Q9UNQ2 313 aaKnown RBP13.79□□□□□ -0.2
COL7A1-208ENST00000470076 SIRT4Q9Y6E7 314 aaPredicted RBP13.79□□□□□ -0.2
COL7A1-208ENST00000470076 TENM3Q9P273 2699 aa13.78□□□□□ -0.2
COL7A1-208ENST00000470076 IGHV3-72A0A0B4J1Y9 119 aa13.78□□□□□ -0.2
COL7A1-208ENST00000470076 GPX5O75715 221 aa13.78□□□□□ -0.2
COL7A1-208ENST00000470076 MT-ND4P03905 459 aa13.78□□□□□ -0.2
COL7A1-208ENST00000470076 IGFBP3P17936 291 aaPredicted RBP13.78□□□□□ -0.2
COL7A1-208ENST00000470076 TEX38Q6PEX7 206 aa13.78□□□□□ -0.2
COL7A1-208ENST00000470076 C18orf65Q6ZTR6 163 aa13.78□□□□□ -0.2
COL7A1-208ENST00000470076 ZNF695Q8IW36 515 aa13.78□□□□□ -0.2
COL7A1-208ENST00000470076 CCDC107Q8WV48 283 aa13.78□□□□□ -0.2
COL7A1-208ENST00000470076 RTN4IP1Q8WWV3 396 aaPredicted RBP13.78□□□□□ -0.2
COL7A1-208ENST00000470076 GHSRQ92847 366 aa13.78□□□□□ -0.2
COL7A1-208ENST00000470076 ST6GALNAC6Q969X2 333 aa13.78□□□□□ -0.2
COL7A1-208ENST00000470076 ORAI1Q96D31 301 aa13.78□□□□□ -0.2
COL7A1-208ENST00000470076 P2RX4Q99571 388 aa13.78□□□□□ -0.2
COL7A1-208ENST00000470076 GON7Q9BXV9 100 aa13.78□□□□□ -0.2
COL7A1-208ENST00000470076 ABCG5Q9H222 651 aa13.78□□□□□ -0.2
COL7A1-208ENST00000470076 ZMAT5Q9UDW3 170 aaKnown RBP13.78□□□□□ -0.2
COL7A1-208ENST00000470076 EXOSC1Q9Y3B2 195 aaKnown RBP13.78□□□□□ -0.2
COL7A1-208ENST00000470076 TRBV5-5A0A0J9YX44 114 aa13.77□□□□□ -0.21
COL7A1-208ENST00000470076 AIPO00170 330 aa13.77□□□□□ -0.21
COL7A1-208ENST00000470076 CD1BP29016 333 aa13.77□□□□□ -0.21
COL7A1-208ENST00000470076 GPR12P47775 334 aa13.77□□□□□ -0.21
COL7A1-208ENST00000470076 MED21Q13503 144 aa13.77□□□□□ -0.21
COL7A1-208ENST00000470076 DCTN2Q13561 401 aaKnown RBP13.77□□□□□ -0.21
COL7A1-208ENST00000470076 TMEM30BQ3MIR4 351 aa13.77□□□□□ -0.21
COL7A1-208ENST00000470076 Q499Y3 187 aa13.77□□□□□ -0.21
COL7A1-208ENST00000470076 YIF1BQ5BJH7 314 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms