RNA–Protein interactions for RNA: ENST00000466543.1

CYTH3-205, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-205ENST00000466543 KCNJ3P48549 501 aa13.52□□□□□ -0.25
CYTH3-205ENST00000466543 LUMP51884 338 aaPredicted RBP13.52□□□□□ -0.25
CYTH3-205ENST00000466543 SLC16A12Q6ZSM3 486 aa13.52□□□□□ -0.25
CYTH3-205ENST00000466543 IZUMO1Q8IYV9 350 aa13.52□□□□□ -0.25
CYTH3-205ENST00000466543 OR10A7Q8NGE5 316 aa13.52□□□□□ -0.25
CYTH3-205ENST00000466543 ST6GALNAC6Q969X2 333 aa13.52□□□□□ -0.25
CYTH3-205ENST00000466543 WWC2-AS2Q96NR7 200 aa13.52□□□□□ -0.25
CYTH3-205ENST00000466543 SLC29A1Q99808 456 aa13.52□□□□□ -0.25
CYTH3-205ENST00000466543 IFT22Q9H7X7 185 aa13.52□□□□□ -0.25
CYTH3-205ENST00000466543 DCLRE1BQ9H816 532 aa13.52□□□□□ -0.25
CYTH3-205ENST00000466543 SIRT4Q9Y6E7 314 aaPredicted RBP13.52□□□□□ -0.25
CYTH3-205ENST00000466543 HUWE1Q7Z6Z7 4374 aaKnown RBP13.52□□□□□ -0.25
CYTH3-205ENST00000466543 IGHV3-43A0A0B4J1X8 118 aa13.51□□□□□ -0.25
CYTH3-205ENST00000466543 SLC31A2O15432 143 aa13.51□□□□□ -0.25
CYTH3-205ENST00000466543 CIB2O75838 187 aa13.51□□□□□ -0.25
CYTH3-205ENST00000466543 ATP5HO75947 161 aa13.51□□□□□ -0.25
CYTH3-205ENST00000466543 OR7C1O76099 320 aaPredicted RBP13.51□□□□□ -0.25
CYTH3-205ENST00000466543 FADS2O95864 444 aaKnown RBP13.51□□□□□ -0.25
CYTH3-205ENST00000466543 IGHV3-43DP0DP04 118 aa13.51□□□□□ -0.25
CYTH3-205ENST00000466543 GBX2P52951 348 aaPredicted RBP13.51□□□□□ -0.25
CYTH3-205ENST00000466543 RBM11P57052 281 aaKnown RBP13.51□□□□□ -0.25
CYTH3-205ENST00000466543 NKAPLQ5M9Q1 402 aa13.51□□□□□ -0.25
CYTH3-205ENST00000466543 TGIF2LXQ8IUE1 241 aa13.51□□□□□ -0.25
CYTH3-205ENST00000466543 FOXRED2Q8IWF2 684 aa13.51□□□□□ -0.25
CYTH3-205ENST00000466543 CCDC107Q8WV48 283 aa13.51□□□□□ -0.25
CYTH3-205ENST00000466543 MRPL48Q96GC5 212 aaKnown RBP13.51□□□□□ -0.25
CYTH3-205ENST00000466543 MCRIP2Q9BUT9 160 aaKnown RBP13.51□□□□□ -0.25
CYTH3-205ENST00000466543 ABCG5Q9H222 651 aa13.51□□□□□ -0.25
CYTH3-205ENST00000466543 STAB2Q8WWQ8 2551 aa13.5□□□□□ -0.25
CYTH3-205ENST00000466543 MAGEA13PA6NCF6 341 aa13.5□□□□□ -0.25
CYTH3-205ENST00000466543 SNTNA6NMZ2 147 aa13.5□□□□□ -0.25
CYTH3-205ENST00000466543 NCBP2LA6PVI3 153 aaKnown RBP13.5□□□□□ -0.25
CYTH3-205ENST00000466543 SDCBPO00560 298 aaPredicted RBP13.5□□□□□ -0.25
CYTH3-205ENST00000466543 DYNC1I1O14576 645 aa13.5□□□□□ -0.25
CYTH3-205ENST00000466543 GAPDHP04406 335 aaKnown RBP13.5□□□□□ -0.25
CYTH3-205ENST00000466543 RPSAP08865 295 aaKnown RBP13.5□□□□□ -0.25
CYTH3-205ENST00000466543 SLC6A1P30531 599 aa13.5□□□□□ -0.25
CYTH3-205ENST00000466543 RAB25P57735 213 aa13.5□□□□□ -0.25
CYTH3-205ENST00000466543 SLC35B1P78383 322 aa13.5□□□□□ -0.25
CYTH3-205ENST00000466543 DGCR2P98153 550 aa13.5□□□□□ -0.25
CYTH3-205ENST00000466543 CFHR3Q02985 330 aa13.5□□□□□ -0.25
CYTH3-205ENST00000466543 RAB40BQ12829 278 aa13.5□□□□□ -0.25
CYTH3-205ENST00000466543 SMN1Q16637 294 aaKnown RBP13.5□□□□□ -0.25
CYTH3-205ENST00000466543 NHLRC3Q5JS37 347 aa13.5□□□□□ -0.25
CYTH3-205ENST00000466543 LINC00311Q8N616 119 aa13.5□□□□□ -0.25
CYTH3-205ENST00000466543 COMMD1Q8N668 190 aa13.5□□□□□ -0.25
CYTH3-205ENST00000466543 OR13C5Q8NGS8 318 aa13.5□□□□□ -0.25
CYTH3-205ENST00000466543 OR52N1Q8NH53 320 aa13.5□□□□□ -0.25
CYTH3-205ENST00000466543 ARL11Q969Q4 196 aa13.5□□□□□ -0.25
CYTH3-205ENST00000466543 HSPB9Q9BQS6 159 aa13.5□□□□□ -0.25
CYTH3-205ENST00000466543 MRPS18AQ9NVS2 196 aaKnown RBP13.5□□□□□ -0.25
CYTH3-205ENST00000466543 GFOD1Q9NXC2 390 aa13.5□□□□□ -0.25
CYTH3-205ENST00000466543 IL36GQ9NZH8 169 aa13.5□□□□□ -0.25
CYTH3-205ENST00000466543 ING4Q9UNL4 249 aa13.5□□□□□ -0.25
CYTH3-205ENST00000466543 LSM4Q9Y4Z0 139 aaKnown RBP13.5□□□□□ -0.25
CYTH3-205ENST00000466543 TMEM30CPA0ZSE6 113 aa13.49□□□□□ -0.25
CYTH3-205ENST00000466543 AP4M1O00189 453 aa13.49□□□□□ -0.25
CYTH3-205ENST00000466543 MAGEB3O15480 346 aa13.49□□□□□ -0.25
CYTH3-205ENST00000466543 SERPINA2P20848 420 aa13.49□□□□□ -0.25
CYTH3-205ENST00000466543 ETV1P50549 477 aa13.49□□□□□ -0.25
CYTH3-205ENST00000466543 MRPL28Q13084 256 aaKnown RBP13.49□□□□□ -0.25
CYTH3-205ENST00000466543 DDI2Q5TDH0 399 aa13.49□□□□□ -0.25
CYTH3-205ENST00000466543 OR2G6Q5TZ20 316 aa13.49□□□□□ -0.25
CYTH3-205ENST00000466543 TEX38Q6PEX7 206 aa13.49□□□□□ -0.25
CYTH3-205ENST00000466543 RNF152Q8N8N0 203 aa13.49□□□□□ -0.25
CYTH3-205ENST00000466543 RTN4IP1Q8WWV3 396 aaPredicted RBP13.49□□□□□ -0.25
CYTH3-205ENST00000466543 TMEM106AQ96A25 262 aa13.49□□□□□ -0.25
CYTH3-205ENST00000466543 PRR25Q96S07 402 aa13.49□□□□□ -0.25
CYTH3-205ENST00000466543 LIN7CQ9NUP9 197 aaKnown RBP13.49□□□□□ -0.25
CYTH3-205ENST00000466543 FAM118AQ9NWS6 357 aa13.49□□□□□ -0.25
CYTH3-205ENST00000466543 WBP4O75554 376 aaKnown RBP13.48□□□□□ -0.25
CYTH3-205ENST00000466543 LALBAP00709 142 aa13.48□□□□□ -0.25
CYTH3-205ENST00000466543 MT-ND4P03905 459 aa13.48□□□□□ -0.25
CYTH3-205ENST00000466543 GZMHP20718 246 aa13.48□□□□□ -0.25
CYTH3-205ENST00000466543 VHLP40337 213 aa13.48□□□□□ -0.25
CYTH3-205ENST00000466543 ZNF134P52741 427 aa13.48□□□□□ -0.25
CYTH3-205ENST00000466543 F2RL1P55085 397 aa13.48□□□□□ -0.25
CYTH3-205ENST00000466543 GPR50Q13585 617 aa13.48□□□□□ -0.25
CYTH3-205ENST00000466543 PNLIPRP3Q17RR3 467 aa13.48□□□□□ -0.25
CYTH3-205ENST00000466543 ZNF497Q6ZNH5 498 aa13.48□□□□□ -0.25
CYTH3-205ENST00000466543 ZNF439Q8NDP4 499 aa13.48□□□□□ -0.25
CYTH3-205ENST00000466543 OR52M1Q8NGK5 317 aa13.48□□□□□ -0.25
CYTH3-205ENST00000466543 OR2T10Q8NGZ9 312 aa13.48□□□□□ -0.25
CYTH3-205ENST00000466543 GPR148Q8TDV2 347 aa13.48□□□□□ -0.25
CYTH3-205ENST00000466543 CPNE2Q96FN4 548 aaPredicted RBP13.48□□□□□ -0.25
CYTH3-205ENST00000466543 S1PR3Q99500 378 aa13.48□□□□□ -0.25
CYTH3-205ENST00000466543 METTL9Q9H1A3 318 aa13.48□□□□□ -0.25
CYTH3-205ENST00000466543 SCOCQ9UIL1 159 aa13.48□□□□□ -0.25
CYTH3-205ENST00000466543 DNAH7Q8WXX0 4024 aa13.48□□□□□ -0.25
CYTH3-205ENST00000466543 LOC100130705A0A1B0GUX0 176 aa13.47□□□□□ -0.25
CYTH3-205ENST00000466543 C12orf77C9JDV5 145 aa13.47□□□□□ -0.25
CYTH3-205ENST00000466543 ZNF93P35789 620 aaPredicted RBP13.47□□□□□ -0.25
CYTH3-205ENST00000466543 FOXE3Q13461 319 aa13.47□□□□□ -0.25
CYTH3-205ENST00000466543 KIR2DS1Q14954 304 aa13.47□□□□□ -0.25
CYTH3-205ENST00000466543 ATAD3CQ5T2N8 411 aa13.47□□□□□ -0.25
CYTH3-205ENST00000466543 RPL22L1Q6P5R6 122 aaKnown RBP13.47□□□□□ -0.25
CYTH3-205ENST00000466543 UNQ9370/PRO34162Q6UXP9 181 aa13.47□□□□□ -0.25
CYTH3-205ENST00000466543 C5orf24Q7Z6I8 188 aa13.47□□□□□ -0.25
CYTH3-205ENST00000466543 FAM71E2Q8N5Q1 922 aa13.47□□□□□ -0.25
CYTH3-205ENST00000466543 C8orf31Q8N9H6 132 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms