RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 SCXQ7RTU7 201 aa1.66□□□□□ -2.14
LRCH3-211ENST00000466054 MSRB3Q8IXL7 192 aa1.66□□□□□ -2.14
LRCH3-211ENST00000466054 GPR119Q8TDV5 335 aa1.66□□□□□ -2.14
LRCH3-211ENST00000466054 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.66□□□□□ -2.14
LRCH3-211ENST00000466054 NAP1L5Q96NT1 182 aaPredicted RBP1.66□□□□□ -2.14
LRCH3-211ENST00000466054 PRSS27Q9BQR3 290 aa1.66□□□□□ -2.14
LRCH3-211ENST00000466054 TAPBPLQ9BX59 468 aa1.66□□□□□ -2.14
LRCH3-211ENST00000466054 IFT46Q9NQC8 304 aa1.66□□□□□ -2.14
LRCH3-211ENST00000466054 TMEM106BQ9NUM4 274 aa1.66□□□□□ -2.14
LRCH3-211ENST00000466054 MYO15BQ96JP2 1530 aa1.66□□□□□ -2.14
LRCH3-211ENST00000466054 MYO9BQ13459 2157 aa1.65□□□□□ -2.14
LRCH3-211ENST00000466054 SLC25A20O43772 301 aa1.65□□□□□ -2.15
LRCH3-211ENST00000466054 CRTAPO75718 401 aaPredicted RBP1.65□□□□□ -2.15
LRCH3-211ENST00000466054 LDOC1O95751 146 aaPredicted RBP1.65□□□□□ -2.15
LRCH3-211ENST00000466054 LTAP01374 205 aa1.65□□□□□ -2.15
LRCH3-211ENST00000466054 AQP5P55064 265 aa1.65□□□□□ -2.15
LRCH3-211ENST00000466054 MP68P56378 58 aa1.65□□□□□ -2.15
LRCH3-211ENST00000466054 UBE2KP61086 200 aa1.65□□□□□ -2.15
LRCH3-211ENST00000466054 PAFAH1B3Q15102 231 aaKnown RBP1.65□□□□□ -2.15
LRCH3-211ENST00000466054 FBXO48Q5FWF7 155 aa1.65□□□□□ -2.15
LRCH3-211ENST00000466054 NIPAL1Q6NVV3 410 aa1.65□□□□□ -2.15
LRCH3-211ENST00000466054 AHSA2Q719I0 299 aa1.65□□□□□ -2.15
LRCH3-211ENST00000466054 LRRC6Q86X45 466 aa1.65□□□□□ -2.15
LRCH3-211ENST00000466054 ZNF567Q8N184 647 aa1.65□□□□□ -2.15
LRCH3-211ENST00000466054 OR10P1Q8NGE3 313 aa1.65□□□□□ -2.15
LRCH3-211ENST00000466054 CCDC124Q96CT7 223 aaKnown RBP1.65□□□□□ -2.15
LRCH3-211ENST00000466054 PGLYRP3Q96LB9 341 aa1.65□□□□□ -2.15
LRCH3-211ENST00000466054 STK38LQ9Y2H1 464 aa1.65□□□□□ -2.15
LRCH3-211ENST00000466054 HSPE1-MOB4S4R3N1 261 aa1.65□□□□□ -2.15
LRCH3-211ENST00000466054 COL5A3P25940 1745 aaPredicted RBP1.65□□□□□ -2.15
LRCH3-211ENST00000466054 SHANK3Q9BYB0 1731 aa1.65□□□□□ -2.15
LRCH3-211ENST00000466054 ABCB11O95342 1321 aa1.65□□□□□ -2.15
LRCH3-211ENST00000466054 LCTP09848 1927 aa1.64□□□□□ -2.15
LRCH3-211ENST00000466054 TRGV4A0A0C4DH28 118 aa1.64□□□□□ -2.15
LRCH3-211ENST00000466054 LOC100506127A0A0U1RQW1 187 aa1.64□□□□□ -2.15
LRCH3-211ENST00000466054 C17orf98A8MV24 154 aa1.64□□□□□ -2.15
LRCH3-211ENST00000466054 F5H5T6 163 aa1.64□□□□□ -2.15
LRCH3-211ENST00000466054 FADS2O95864 444 aaKnown RBP1.64□□□□□ -2.15
LRCH3-211ENST00000466054 COILP38432 576 aaPredicted RBP1.64□□□□□ -2.15
LRCH3-211ENST00000466054 RAB2AP61019 212 aa1.64□□□□□ -2.15
LRCH3-211ENST00000466054 APOFQ13790 326 aa1.64□□□□□ -2.15
LRCH3-211ENST00000466054 OR8G1Q15617 311 aa1.64□□□□□ -2.15
LRCH3-211ENST00000466054 Q3ZCU0 254 aa1.64□□□□□ -2.15
LRCH3-211ENST00000466054 ZNF767PQ75MW2 155 aa1.64□□□□□ -2.15
LRCH3-211ENST00000466054 FAM19A3Q7Z5A8 133 aa1.64□□□□□ -2.15
LRCH3-211ENST00000466054 CD200R1Q8TD46 325 aa1.64□□□□□ -2.15
LRCH3-211ENST00000466054 PDCD6IPQ8WUM4 868 aaKnown RBP1.64□□□□□ -2.15
LRCH3-211ENST00000466054 C19orf60Q96EN9 201 aa1.64□□□□□ -2.15
LRCH3-211ENST00000466054 MRAP2Q96G30 205 aa1.64□□□□□ -2.15
LRCH3-211ENST00000466054 TAS2R13Q9NYV9 303 aa1.64□□□□□ -2.15
LRCH3-211ENST00000466054 MRM2Q9UI43 246 aaKnown RBP1.64□□□□□ -2.15
LRCH3-211ENST00000466054 SNX24Q9Y343 169 aa1.64□□□□□ -2.15
LRCH3-211ENST00000466054 USP42Q9H9J4 1324 aaKnown RBP1.64□□□□□ -2.15
LRCH3-211ENST00000466054 A0A1B0GX12 115 aa1.63□□□□□ -2.15
LRCH3-211ENST00000466054 C8orf87E5RJ46 101 aa1.63□□□□□ -2.15
LRCH3-211ENST00000466054 EPPINO95925 133 aa1.63□□□□□ -2.15
LRCH3-211ENST00000466054 TPM1P09493 284 aa1.63□□□□□ -2.15
LRCH3-211ENST00000466054 ATF1P18846 271 aa1.63□□□□□ -2.15
LRCH3-211ENST00000466054 FLOT2Q14254 428 aa1.63□□□□□ -2.15
LRCH3-211ENST00000466054 ACSBG2Q5FVE4 666 aa1.63□□□□□ -2.15
LRCH3-211ENST00000466054 AADACL4Q5VUY2 407 aa1.63□□□□□ -2.15
LRCH3-211ENST00000466054 DDIT4LQ96D03 193 aa1.63□□□□□ -2.15
LRCH3-211ENST00000466054 HBEGFQ99075 208 aa1.63□□□□□ -2.15
LRCH3-211ENST00000466054 AICDAQ9GZX7 198 aa1.63□□□□□ -2.15
LRCH3-211ENST00000466054 ZNF286AQ9HBT8 521 aa1.63□□□□□ -2.15
LRCH3-211ENST00000466054 MYO5BQ9ULV0 1848 aa1.63□□□□□ -2.15
LRCH3-211ENST00000466054 RAB3GAP2Q9H2M9 1393 aa1.62□□□□□ -2.15
LRCH3-211ENST00000466054 A8MWP6 167 aa1.62□□□□□ -2.15
LRCH3-211ENST00000466054 BOLA2-SMG1P6H3BVE0 249 aa1.62□□□□□ -2.15
LRCH3-211ENST00000466054 NQO2P16083 231 aa1.62□□□□□ -2.15
LRCH3-211ENST00000466054 LCN1P31025 176 aa1.62□□□□□ -2.15
LRCH3-211ENST00000466054 ETV1P50549 477 aa1.62□□□□□ -2.15
LRCH3-211ENST00000466054 DEFB103AP81534 67 aa1.62□□□□□ -2.15
LRCH3-211ENST00000466054 SKP2Q13309 424 aa1.62□□□□□ -2.15
LRCH3-211ENST00000466054 TMEM176BQ3YBM2 270 aaPredicted RBP1.62□□□□□ -2.15
LRCH3-211ENST00000466054 TCF23Q7RTU1 214 aa1.62□□□□□ -2.15
LRCH3-211ENST00000466054 TMEM25Q86YD3 366 aa1.62□□□□□ -2.15
LRCH3-211ENST00000466054 MUC15Q8N387 334 aa1.62□□□□□ -2.15
LRCH3-211ENST00000466054 OR9I1Q8NGQ6 314 aa1.62□□□□□ -2.15
LRCH3-211ENST00000466054 RORBQ92753 470 aa1.62□□□□□ -2.15
LRCH3-211ENST00000466054 GALMQ96C23 342 aa1.62□□□□□ -2.15
LRCH3-211ENST00000466054 OR51E2Q9H255 320 aa1.62□□□□□ -2.15
LRCH3-211ENST00000466054 FBXL15Q9H469 300 aa1.62□□□□□ -2.15
LRCH3-211ENST00000466054 PSORS1C2Q9UIG4 136 aa1.62□□□□□ -2.15
LRCH3-211ENST00000466054 MTCH2Q9Y6C9 303 aa1.62□□□□□ -2.15
LRCH3-211ENST00000466054 TRPM3Q9HCF6 1732 aaPredicted RBP1.62□□□□□ -2.15
LRCH3-211ENST00000466054 BAHCC1Q9P281 2608 aa1.62□□□□□ -2.15
LRCH3-211ENST00000466054 VWDEQ8N2E2 1590 aa1.61□□□□□ -2.15
LRCH3-211ENST00000466054 ZNF879B4DU55 563 aa1.61□□□□□ -2.15
LRCH3-211ENST00000466054 LY6LH3BQJ8 138 aa1.61□□□□□ -2.15
LRCH3-211ENST00000466054 H3BSA7 217 aa1.61□□□□□ -2.15
LRCH3-211ENST00000466054 OVOL1O14753 267 aa1.61□□□□□ -2.15
LRCH3-211ENST00000466054 POLR3GO15318 223 aaPredicted RBP1.61□□□□□ -2.15
LRCH3-211ENST00000466054 SGCEO43556 437 aa1.61□□□□□ -2.15
LRCH3-211ENST00000466054 SNAP29O95721 258 aa1.61□□□□□ -2.15
LRCH3-211ENST00000466054 IFI30P13284 250 aa1.61□□□□□ -2.15
LRCH3-211ENST00000466054 KRTAP12-1P59990 96 aa1.61□□□□□ -2.15
LRCH3-211ENST00000466054 STX3Q13277 289 aa1.61□□□□□ -2.15
LRCH3-211ENST00000466054 OR4D1Q15615 310 aa1.61□□□□□ -2.15
LRCH3-211ENST00000466054 TMEM249Q2WGJ8 235 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms