RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 ZIK1Q3SY52 487 aaPredicted RBP7.63□□□□□ -1.19
USP39-212ENST00000465514 C9orf66Q5T8R8 295 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 RSBN1Q5VWQ0 802 aaPredicted RBP7.63□□□□□ -1.19
USP39-212ENST00000465514 LPCAT4Q643R3 524 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 SLC16A12Q6ZSM3 486 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 SLC35E3Q7Z769 313 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 SATL1Q86VE3 508 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 OR8H3Q8N146 312 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 PARP16Q8N5Y8 322 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 KLHL30-AS1Q8NEE0 82 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 PXT1Q8NFP0 134 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 OR10K1Q8NGX5 313 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 OR10X1Q8NGY0 326 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 PLPPR1Q8TBJ4 325 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 MRGPRDQ8TDS7 321 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 MRPL48Q96GC5 212 aaKnown RBP7.63□□□□□ -1.19
USP39-212ENST00000465514 ALG8Q9BVK2 526 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 DHDHQ9UQ10 334 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 ORC6Q9Y5N6 252 aa7.63□□□□□ -1.19
USP39-212ENST00000465514 ABCA13Q86UQ4 5058 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 TMEM212A6NML5 194 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 SNTNA6NMZ2 147 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 GABRPO00591 440 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 HSD17B6O14756 317 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 ALPLP05186 524 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 RPSAP08865 295 aaKnown RBP7.62□□□□□ -1.19
USP39-212ENST00000465514 RAB3AP20336 220 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 SSTR5P35346 364 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 RASSF2P50749 326 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 GP2P55259 537 aaKnown RBP7.62□□□□□ -1.19
USP39-212ENST00000465514 PAX5Q02548 391 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 EBI3Q14213 229 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 IL13RA2Q14627 380 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 RSU1Q15404 277 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 PIGYQ3MUY2 71 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 MOB3BQ86TA1 216 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 ZNF695Q8IW36 515 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 FOXRED2Q8IWF2 684 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 SYS1Q8N2H4 156 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 STPG2Q8N412 459 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 COMMD1Q8N668 190 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 OR10A7Q8NGE5 316 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 OR5AK2Q8NH90 309 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 TNFAIP8L1Q8WVP5 186 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 TSEN15Q8WW01 171 aaKnown RBP7.62□□□□□ -1.19
USP39-212ENST00000465514 RAX2Q96IS3 184 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 MYCBPQ99417 103 aaPredicted RBP7.62□□□□□ -1.19
USP39-212ENST00000465514 GPER1Q99527 375 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 PDCD1LG2Q9BQ51 273 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 ZNF581Q9P0T4 197 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 SCOCQ9UIL1 159 aa7.62□□□□□ -1.19
USP39-212ENST00000465514 IGHV3-72A0A0B4J1Y9 119 aa7.61□□□□□ -1.19
USP39-212ENST00000465514 IGHV1-3A0A0C4DH29 117 aa7.61□□□□□ -1.19
USP39-212ENST00000465514 NCBP2LA6PVI3 153 aaKnown RBP7.61□□□□□ -1.19
USP39-212ENST00000465514 SEC14L6B5MCN3 397 aa7.61□□□□□ -1.19
USP39-212ENST00000465514 CCL24O00175 119 aa7.61□□□□□ -1.19
USP39-212ENST00000465514 CCRL2O00421 344 aa7.61□□□□□ -1.19
USP39-212ENST00000465514 EI24O14681 340 aa7.61□□□□□ -1.19
USP39-212ENST00000465514 MAGEB3O15480 346 aa7.61□□□□□ -1.19
USP39-212ENST00000465514 HTR3BO95264 441 aa7.61□□□□□ -1.19
USP39-212ENST00000465514 GAPDHP04406 335 aaKnown RBP7.61□□□□□ -1.19
USP39-212ENST00000465514 GPR12P47775 334 aa7.61□□□□□ -1.19
USP39-212ENST00000465514 REG1BP48304 166 aa7.61□□□□□ -1.19
USP39-212ENST00000465514 KCNJ3P48549 501 aa7.61□□□□□ -1.19
USP39-212ENST00000465514 GBX2P52951 348 aaPredicted RBP7.61□□□□□ -1.19
USP39-212ENST00000465514 ZNF816Q0VGE8 651 aaPredicted RBP7.61□□□□□ -1.19
USP39-212ENST00000465514 ZNF529Q6P280 563 aa7.61□□□□□ -1.19
USP39-212ENST00000465514 TEX38Q6PEX7 206 aa7.61□□□□□ -1.19
USP39-212ENST00000465514 ASCL4Q6XD76 172 aa7.61□□□□□ -1.19
USP39-212ENST00000465514 SUMF2Q8NBJ7 301 aa7.61□□□□□ -1.19
USP39-212ENST00000465514 OR51A2Q8NGJ7 313 aa7.61□□□□□ -1.19
USP39-212ENST00000465514 GATAD1Q8WUU5 269 aa7.61□□□□□ -1.19
USP39-212ENST00000465514 PYDC1Q8WXC3 89 aa7.61□□□□□ -1.19
USP39-212ENST00000465514 CPNE2Q96FN4 548 aaPredicted RBP7.61□□□□□ -1.19
USP39-212ENST00000465514 EAF1Q96JC9 268 aaPredicted RBP7.61□□□□□ -1.19
USP39-212ENST00000465514 TM2D3Q9BRN9 247 aa7.61□□□□□ -1.19
USP39-212ENST00000465514 DPCDQ9BVM2 203 aaPredicted RBP7.61□□□□□ -1.19
USP39-212ENST00000465514 FAM192AQ9GZU8 254 aa7.61□□□□□ -1.19
USP39-212ENST00000465514 FAM118AQ9NWS6 357 aa7.61□□□□□ -1.19
USP39-212ENST00000465514 ERVK13-1Q9NX77 482 aa7.61□□□□□ -1.19
USP39-212ENST00000465514 ING4Q9UNL4 249 aa7.61□□□□□ -1.19
USP39-212ENST00000465514 MUC4Q99102 2169 aa7.61□□□□□ -1.19
USP39-212ENST00000465514 AP4M1O00189 453 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 CIB2O75838 187 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 ATP5HO75947 161 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 CDRT1O95170 752 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 FADS2O95864 444 aaKnown RBP7.6□□□□□ -1.19
USP39-212ENST00000465514 RPLP1P05386 114 aaKnown RBP7.6□□□□□ -1.19
USP39-212ENST00000465514 GABRB1P18505 474 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 GZMHP20718 246 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 MYF6P23409 242 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 SOX2P48431 317 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 ALDH3A2P51648 485 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 MRPL28Q13084 256 aaKnown RBP7.6□□□□□ -1.19
USP39-212ENST00000465514 PNLIPRP3Q17RR3 467 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 DEFB136Q30KP8 78 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 LCNL1Q6ZST4 164 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 TGIF2LXQ8IUE1 241 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 Q8N6K4 173 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 Q8N9W7 124 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms