RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 TRAV39A0A0B4J263 110 aa16.51■□□□□ 0.23
SKA3-205ENST00000465471 UBE2QL1A1L167 161 aa16.51■□□□□ 0.23
SKA3-205ENST00000465471 C15orf65H3BRN8 121 aa16.51■□□□□ 0.23
SKA3-205ENST00000465471 SOCS1O15524 211 aa16.51■□□□□ 0.23
SKA3-205ENST00000465471 FBP1P09467 338 aa16.51■□□□□ 0.23
SKA3-205ENST00000465471 RAB6AP20340 208 aa16.51■□□□□ 0.23
SKA3-205ENST00000465471 OMGP23515 440 aa16.51■□□□□ 0.23
SKA3-205ENST00000465471 BLVRBP30043 206 aaPredicted RBP16.51■□□□□ 0.23
SKA3-205ENST00000465471 SSTR5P35346 364 aa16.51■□□□□ 0.23
SKA3-205ENST00000465471 EFNB2P52799 333 aa16.51■□□□□ 0.23
SKA3-205ENST00000465471 SLC9A3R2Q15599 337 aa16.51■□□□□ 0.23
SKA3-205ENST00000465471 NKAPLQ5M9Q1 402 aa16.51■□□□□ 0.23
SKA3-205ENST00000465471 C6orf201Q7Z4U5 140 aa16.51■□□□□ 0.23
SKA3-205ENST00000465471 RTN4RL2Q86UN3 420 aa16.51■□□□□ 0.23
SKA3-205ENST00000465471 OR10A7Q8NGE5 316 aa16.51■□□□□ 0.23
SKA3-205ENST00000465471 FUNDC2Q9BWH2 189 aa16.51■□□□□ 0.23
SKA3-205ENST00000465471 CLEC7AQ9BXN2 247 aa16.51■□□□□ 0.23
SKA3-205ENST00000465471 MBNL3Q9NUK0 354 aaKnown RBP16.51■□□□□ 0.23
SKA3-205ENST00000465471 HSF4Q9ULV5 492 aa16.51■□□□□ 0.23
SKA3-205ENST00000465471 HOXA3O43365 443 aaPredicted RBP16.5■□□□□ 0.23
SKA3-205ENST00000465471 ORC5O43913 435 aa16.5■□□□□ 0.23
SKA3-205ENST00000465471 GZMHP20718 246 aa16.5■□□□□ 0.23
SKA3-205ENST00000465471 TGFBR1P36897 503 aa16.5■□□□□ 0.23
SKA3-205ENST00000465471 ALDH3B2P48448 385 aa16.5■□□□□ 0.23
SKA3-205ENST00000465471 TMEM50BP56557 158 aa16.5■□□□□ 0.23
SKA3-205ENST00000465471 MXD1Q05195 221 aa16.5■□□□□ 0.23
SKA3-205ENST00000465471 LDLRAD2Q5SZI1 272 aa16.5■□□□□ 0.23
SKA3-205ENST00000465471 TMEM86BQ8N661 226 aa16.5■□□□□ 0.23
SKA3-205ENST00000465471 BEND2Q8NDZ0 799 aa16.5■□□□□ 0.23
SKA3-205ENST00000465471 MRPL30Q8TCC3 161 aaKnown RBP16.5■□□□□ 0.23
SKA3-205ENST00000465471 TMEM158Q8WZ71 300 aa16.5■□□□□ 0.23
SKA3-205ENST00000465471 ZDHHC16Q969W1 377 aa16.5■□□□□ 0.23
SKA3-205ENST00000465471 MDFIQ99750 246 aa16.5■□□□□ 0.23
SKA3-205ENST00000465471 IDI2-AS1Q9NZ38 188 aa16.5■□□□□ 0.23
SKA3-205ENST00000465471 FAM96BQ9Y3D0 163 aa16.5■□□□□ 0.23
SKA3-205ENST00000465471 TBL2Q9Y4P3 447 aaKnown RBP16.5■□□□□ 0.23
SKA3-205ENST00000465471 TRIM77I1YAP6 450 aa16.49■□□□□ 0.23
SKA3-205ENST00000465471 IGLV1-47P01700 117 aa16.49■□□□□ 0.23
SKA3-205ENST00000465471 ARG1P05089 322 aa16.49■□□□□ 0.23
SKA3-205ENST00000465471 TFAP2AP05549 437 aa16.49■□□□□ 0.23
SKA3-205ENST00000465471 RNASE1P07998 156 aaKnown RBP16.49■□□□□ 0.23
SKA3-205ENST00000465471 IER3P46695 156 aa16.49■□□□□ 0.23
SKA3-205ENST00000465471 UTF1Q5T230 341 aa16.49■□□□□ 0.23
SKA3-205ENST00000465471 LHFPL4Q7Z7J7 247 aa16.49■□□□□ 0.23
SKA3-205ENST00000465471 OR56B1Q8NGI3 324 aa16.49■□□□□ 0.23
SKA3-205ENST00000465471 OR4P4Q8NGL7 312 aa16.49■□□□□ 0.23
SKA3-205ENST00000465471 FAM216AQ8WUB2 273 aa16.49■□□□□ 0.23
SKA3-205ENST00000465471 CCDC107Q8WV48 283 aa16.49■□□□□ 0.23
SKA3-205ENST00000465471 FAAP24Q9BTP7 215 aa16.49■□□□□ 0.23
SKA3-205ENST00000465471 MEGF9Q9H1U4 602 aa16.49■□□□□ 0.23
SKA3-205ENST00000465471 ZNF286AQ9HBT8 521 aa16.49■□□□□ 0.23
SKA3-205ENST00000465471 DAPK2Q9UIK4 370 aa16.49■□□□□ 0.23
SKA3-205ENST00000465471 POMT1Q9Y6A1 747 aa16.49■□□□□ 0.23
SKA3-205ENST00000465471 NAPSAO96009 420 aa16.48■□□□□ 0.23
SKA3-205ENST00000465471 VEGFCP49767 419 aa16.48■□□□□ 0.23
SKA3-205ENST00000465471 PLAC9Q5JTB6 97 aa16.48■□□□□ 0.23
SKA3-205ENST00000465471 C6orf183Q5T699 404 aa16.48■□□□□ 0.23
SKA3-205ENST00000465471 Q6ZPA2 131 aa16.48■□□□□ 0.23
SKA3-205ENST00000465471 SLC16A12Q6ZSM3 486 aa16.48■□□□□ 0.23
SKA3-205ENST00000465471 ZNF554Q86TJ5 538 aa16.48■□□□□ 0.23
SKA3-205ENST00000465471 ABHD12Q8N2K0 398 aa16.48■□□□□ 0.23
SKA3-205ENST00000465471 OR4K15Q8NH41 348 aa16.48■□□□□ 0.23
SKA3-205ENST00000465471 SSMEM1Q8WWF3 244 aa16.48■□□□□ 0.23
SKA3-205ENST00000465471 DUX5Q96PT3 197 aa16.48■□□□□ 0.23
SKA3-205ENST00000465471 PLEKHJ1Q9NW61 149 aa16.48■□□□□ 0.23
SKA3-205ENST00000465471 TRAPPC2LQ9UL33 140 aa16.48■□□□□ 0.23
SKA3-205ENST00000465471 C12orf77C9JDV5 145 aa16.47■□□□□ 0.23
SKA3-205ENST00000465471 RAB27BO00194 218 aa16.47■□□□□ 0.23
SKA3-205ENST00000465471 F2RL2O00254 374 aa16.47■□□□□ 0.23
SKA3-205ENST00000465471 TMEM127O75204 238 aa16.47■□□□□ 0.23
SKA3-205ENST00000465471 PAHP00439 452 aa16.47■□□□□ 0.23
SKA3-205ENST00000465471 RCC1P18754 421 aaPredicted RBP16.47■□□□□ 0.23
SKA3-205ENST00000465471 LGALS4P56470 323 aa16.47■□□□□ 0.23
SKA3-205ENST00000465471 SCAND1P57086 179 aa16.47■□□□□ 0.23
SKA3-205ENST00000465471 FAM189A2Q15884 450 aa16.47■□□□□ 0.23
SKA3-205ENST00000465471 MOGAT2Q3SYC2 334 aa16.47■□□□□ 0.23
SKA3-205ENST00000465471 MINOS1Q5TGZ0 78 aa16.47■□□□□ 0.23
SKA3-205ENST00000465471 ZNF880Q6PDB4 577 aa16.47■□□□□ 0.23
SKA3-205ENST00000465471 TRAT1Q6PIZ9 186 aa16.47■□□□□ 0.23
SKA3-205ENST00000465471 DYNAPQ8N1N2 210 aa16.47■□□□□ 0.23
SKA3-205ENST00000465471 OR52M1Q8NGK5 317 aa16.47■□□□□ 0.23
SKA3-205ENST00000465471 RFESDQ8TAC1 157 aa16.47■□□□□ 0.23
SKA3-205ENST00000465471 ARL11Q969Q4 196 aa16.47■□□□□ 0.23
SKA3-205ENST00000465471 ARHGAP5-AS1Q96IT6 56 aa16.47■□□□□ 0.23
SKA3-205ENST00000465471 PECRQ9BY49 303 aa16.47■□□□□ 0.23
SKA3-205ENST00000465471 MINOS1-NBL1R4GNA1 71 aa16.47■□□□□ 0.23
SKA3-205ENST00000465471 TRBV6-6A0A0A6YYG2 114 aa16.46■□□□□ 0.23
SKA3-205ENST00000465471 FAM172BPA6NC97 362 aa16.46■□□□□ 0.23
SKA3-205ENST00000465471 RNF212BA8MTL3 300 aa16.46■□□□□ 0.23
SKA3-205ENST00000465471 GABARAPO95166 117 aa16.46■□□□□ 0.23
SKA3-205ENST00000465471 IGHV4-59P01825 116 aa16.46■□□□□ 0.23
SKA3-205ENST00000465471 LOXL3P58215 753 aa16.46■□□□□ 0.23
SKA3-205ENST00000465471 LSM3P62310 102 aaKnown RBP16.46■□□□□ 0.23
SKA3-205ENST00000465471 AANATQ16613 207 aa16.46■□□□□ 0.23
SKA3-205ENST00000465471 Q6ZTK2 550 aa16.46■□□□□ 0.23
SKA3-205ENST00000465471 ANKRD13BQ86YJ7 626 aa16.46■□□□□ 0.23
SKA3-205ENST00000465471 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.46■□□□□ 0.23
SKA3-205ENST00000465471 LGALS14Q8TCE9 139 aa16.46■□□□□ 0.23
SKA3-205ENST00000465471 C19orf24Q9BVV8 132 aa16.46■□□□□ 0.23
SKA3-205ENST00000465471 AK3Q9UIJ7 227 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms