RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 C13orf42A0A1B0GVH6 325 aa7.04□□□□□ -1.28
APP-213ENST00000464867 A0A1W2PPE3 182 aa7.04□□□□□ -1.28
APP-213ENST00000464867 TMEM120BA0PK00 339 aa7.04□□□□□ -1.28
APP-213ENST00000464867 RIIAD1A6NNX1 92 aa7.04□□□□□ -1.28
APP-213ENST00000464867 TXNL1O43396 289 aa7.04□□□□□ -1.28
APP-213ENST00000464867 ENTPD6O75354 484 aa7.04□□□□□ -1.28
APP-213ENST00000464867 GADD45GO95257 159 aa7.04□□□□□ -1.28
APP-213ENST00000464867 OR2H2O95918 312 aa7.04□□□□□ -1.28
APP-213ENST00000464867 HLA-DRB1P01911 266 aa7.04□□□□□ -1.28
APP-213ENST00000464867 CSN2P05814 226 aa7.04□□□□□ -1.28
APP-213ENST00000464867 ZNF44P15621 663 aa7.04□□□□□ -1.28
APP-213ENST00000464867 ZNF3P17036 446 aa7.04□□□□□ -1.28
APP-213ENST00000464867 BLVRBP30043 206 aaPredicted RBP7.04□□□□□ -1.28
APP-213ENST00000464867 GSSP48637 474 aa7.04□□□□□ -1.28
APP-213ENST00000464867 FUT6P51993 359 aa7.04□□□□□ -1.28
APP-213ENST00000464867 TSPAN31Q12999 210 aa7.04□□□□□ -1.28
APP-213ENST00000464867 RBMS2Q15434 407 aaKnown RBP7.04□□□□□ -1.28
APP-213ENST00000464867 GUCA2BQ16661 112 aa7.04□□□□□ -1.28
APP-213ENST00000464867 MOGAT2Q3SYC2 334 aa7.04□□□□□ -1.28
APP-213ENST00000464867 LINC01590Q5TEZ4 76 aa7.04□□□□□ -1.28
APP-213ENST00000464867 LIN54Q6MZP7 749 aa7.04□□□□□ -1.28
APP-213ENST00000464867 IL34Q6ZMJ4 242 aa7.04□□□□□ -1.28
APP-213ENST00000464867 TMEM104Q8NE00 496 aa7.04□□□□□ -1.28
APP-213ENST00000464867 DNAAF1Q8NEP3 725 aa7.04□□□□□ -1.28
APP-213ENST00000464867 OR10A7Q8NGE5 316 aa7.04□□□□□ -1.28
APP-213ENST00000464867 ABHD5Q8WTS1 349 aa7.04□□□□□ -1.28
APP-213ENST00000464867 RTN4IP1Q8WWV3 396 aaPredicted RBP7.04□□□□□ -1.28
APP-213ENST00000464867 MS4A10Q96PG2 267 aa7.04□□□□□ -1.28
APP-213ENST00000464867 MROQ9BYG7 248 aa7.04□□□□□ -1.28
APP-213ENST00000464867 WFDC10AQ9H1F0 79 aa7.04□□□□□ -1.28
APP-213ENST00000464867 SLA2Q9H6Q3 261 aa7.04□□□□□ -1.28
APP-213ENST00000464867 RBFOX1Q9NWB1 397 aaKnown RBP7.04□□□□□ -1.28
APP-213ENST00000464867 NDUFAF4Q9P032 175 aa7.04□□□□□ -1.28
APP-213ENST00000464867 PEMTQ9UBM1 199 aa7.04□□□□□ -1.28
APP-213ENST00000464867 GSTK1Q9Y2Q3 226 aa7.04□□□□□ -1.28
APP-213ENST00000464867 CDH10Q9Y6N8 788 aa7.04□□□□□ -1.28
APP-213ENST00000464867 SRRM2Q9UQ35 2752 aaKnown RBP7.03□□□□□ -1.28
APP-213ENST00000464867 UBR4Q5T4S7 5183 aa7.03□□□□□ -1.28
APP-213ENST00000464867 MEIKINA0A087WXM9 373 aa7.03□□□□□ -1.28
APP-213ENST00000464867 IGHV7-81A0A0B4J1V7 117 aa7.03□□□□□ -1.28
APP-213ENST00000464867 A6NIN4 97 aa7.03□□□□□ -1.28
APP-213ENST00000464867 ZNF736B4DX44 427 aaPredicted RBP7.03□□□□□ -1.28
APP-213ENST00000464867 IL1AP01583 271 aa7.03□□□□□ -1.28
APP-213ENST00000464867 CSN3P07498 182 aa7.03□□□□□ -1.28
APP-213ENST00000464867 CALCBP10092 127 aa7.03□□□□□ -1.28
APP-213ENST00000464867 HTR1FP30939 366 aa7.03□□□□□ -1.28
APP-213ENST00000464867 TRIM25Q14258 630 aaKnown RBP7.03□□□□□ -1.28
APP-213ENST00000464867 ATXN7L3Q14CW9 347 aaPredicted RBP7.03□□□□□ -1.28
APP-213ENST00000464867 ZNF829Q3KNS6 432 aaPredicted RBP7.03□□□□□ -1.28
APP-213ENST00000464867 Q6ZWC4 215 aa7.03□□□□□ -1.28
APP-213ENST00000464867 CHST4Q8NCG5 386 aa7.03□□□□□ -1.28
APP-213ENST00000464867 RFESDQ8TAC1 157 aa7.03□□□□□ -1.28
APP-213ENST00000464867 BORCS8Q96FH0 119 aa7.03□□□□□ -1.28
APP-213ENST00000464867 COQ2Q96H96 371 aa7.03□□□□□ -1.28
APP-213ENST00000464867 C7orf26Q96N11 449 aa7.03□□□□□ -1.28
APP-213ENST00000464867 SPACA5Q96QH8 159 aa7.03□□□□□ -1.28
APP-213ENST00000464867 ZNF251Q9BRH9 671 aa7.03□□□□□ -1.28
APP-213ENST00000464867 ZNF355PQ9NSJ1 428 aa7.03□□□□□ -1.28
APP-213ENST00000464867 GID8Q9NWU2 228 aa7.03□□□□□ -1.28
APP-213ENST00000464867 FAM206AQ9NX38 181 aa7.03□□□□□ -1.28
APP-213ENST00000464867 FBXL17Q9UF56 701 aa7.03□□□□□ -1.28
APP-213ENST00000464867 LAMP5Q9UJQ1 280 aa7.03□□□□□ -1.28
APP-213ENST00000464867 GTF2A1LQ9UNN4 478 aa7.03□□□□□ -1.28
APP-213ENST00000464867 BAIAP2Q9UQB8 552 aa7.03□□□□□ -1.28
APP-213ENST00000464867 AP3M1Q9Y2T2 418 aa7.03□□□□□ -1.28
APP-213ENST00000464867 A3GALT2U3KPV4 340 aa7.03□□□□□ -1.28
APP-213ENST00000464867 A0A0G2JLM5 398 aa7.02□□□□□ -1.29
APP-213ENST00000464867 DHRS7CA6NNS2 312 aa7.02□□□□□ -1.29
APP-213ENST00000464867 RTL8CO15255 209 aa7.02□□□□□ -1.29
APP-213ENST00000464867 AIREO43918 545 aa7.02□□□□□ -1.29
APP-213ENST00000464867 SOX15O60248 233 aa7.02□□□□□ -1.29
APP-213ENST00000464867 MITFO75030 526 aaPredicted RBP7.02□□□□□ -1.29
APP-213ENST00000464867 GATBO75879 557 aaKnown RBP7.02□□□□□ -1.29
APP-213ENST00000464867 DIRAS1O95057 198 aa7.02□□□□□ -1.29
APP-213ENST00000464867 SERPINA3P01011 423 aa7.02□□□□□ -1.29
APP-213ENST00000464867 IGLV3-1P01715 115 aa7.02□□□□□ -1.29
APP-213ENST00000464867 TRGV3P03979 118 aa7.02□□□□□ -1.29
APP-213ENST00000464867 BCL3P20749 454 aa7.02□□□□□ -1.29
APP-213ENST00000464867 APOC4P55056 127 aa7.02□□□□□ -1.29
APP-213ENST00000464867 SF3A3Q12874 501 aaKnown RBP eCLIP7.02□□□□□ -1.29
APP-213ENST00000464867 ICAM4Q14773 271 aa7.02□□□□□ -1.29
APP-213ENST00000464867 CD300EQ496F6 205 aaPredicted RBP7.02□□□□□ -1.29
APP-213ENST00000464867 TM4SF20Q53R12 229 aa7.02□□□□□ -1.29
APP-213ENST00000464867 ACTBL2Q562R1 376 aa7.02□□□□□ -1.29
APP-213ENST00000464867 SOHLH1Q5JUK2 328 aa7.02□□□□□ -1.29
APP-213ENST00000464867 DEGS2Q6QHC5 323 aa7.02□□□□□ -1.29
APP-213ENST00000464867 DYNLRB2Q8TF09 96 aa7.02□□□□□ -1.29
APP-213ENST00000464867 FAM162AQ96A26 154 aa7.02□□□□□ -1.29
APP-213ENST00000464867 CLUHP3Q96NS8 147 aa7.02□□□□□ -1.29
APP-213ENST00000464867 FUZQ9BT04 418 aa7.02□□□□□ -1.29
APP-213ENST00000464867 FAM118AQ9NWS6 357 aa7.02□□□□□ -1.29
APP-213ENST00000464867 IL20Q9NYY1 176 aa7.02□□□□□ -1.29
APP-213ENST00000464867 NUFIP1Q9UHK0 495 aaKnown RBP7.02□□□□□ -1.29
APP-213ENST00000464867 DHDHQ9UQ10 334 aa7.02□□□□□ -1.29
APP-213ENST00000464867 V9GYS6 101 aa7.02□□□□□ -1.29
APP-213ENST00000464867 FAT2Q9NYQ8 4349 aa7.02□□□□□ -1.29
APP-213ENST00000464867 DNAH11Q96DT5 4516 aa7.01□□□□□ -1.29
APP-213ENST00000464867 MSGN1A6NI15 193 aa7.01□□□□□ -1.29
APP-213ENST00000464867 ZNF785A8K8V0 405 aa7.01□□□□□ -1.29
APP-213ENST00000464867 C16orf90A8MZG2 172 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms