RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 Q6ZR03 302 aa18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 CCDC71LQ8N9Z2 235 aa18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 CLRN3Q8NCR9 226 aa18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 RTN4IP1Q8WWV3 396 aaPredicted RBP18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 GALNT14Q96FL9 552 aa18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 TLNRD1Q9H1K6 362 aa18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 HES4Q9HCC6 221 aa18.41■□□□□ 0.54
PDLIM2-216ENST00000464275 A0A1B0GWJ7 208 aa18.4■□□□□ 0.54
PDLIM2-216ENST00000464275 H7C1Q1 480 aa18.4■□□□□ 0.54
PDLIM2-216ENST00000464275 OR2H2O95918 312 aa18.4■□□□□ 0.54
PDLIM2-216ENST00000464275 TMPRSS3P57727 454 aa18.4■□□□□ 0.54
PDLIM2-216ENST00000464275 MZT1Q08AG7 82 aa18.4■□□□□ 0.54
PDLIM2-216ENST00000464275 C11orf53Q8IXP5 236 aa18.4■□□□□ 0.54
PDLIM2-216ENST00000464275 CNTNAP3BQ96NU0 1288 aa18.4■□□□□ 0.54
PDLIM2-216ENST00000464275 CNTNAP3Q9BZ76 1288 aa18.4■□□□□ 0.54
PDLIM2-216ENST00000464275 SLC2A9Q9NRM0 540 aa18.4■□□□□ 0.54
PDLIM2-216ENST00000464275 ZFP57Q9NU63 452 aa18.4■□□□□ 0.54
PDLIM2-216ENST00000464275 CARHSP1Q9Y2V2 147 aaKnown RBP18.4■□□□□ 0.54
PDLIM2-216ENST00000464275 SLC33A1O00400 549 aaPredicted RBP18.39■□□□□ 0.53
PDLIM2-216ENST00000464275 GAPDHP04406 335 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-216ENST00000464275 HOXB5P09067 269 aa18.39■□□□□ 0.53
PDLIM2-216ENST00000464275 ATRAIDQ6UW56 229 aa18.39■□□□□ 0.53
PDLIM2-216ENST00000464275 TMED6Q8WW62 240 aa18.39■□□□□ 0.53
PDLIM2-216ENST00000464275 TSNAXQ99598 290 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-216ENST00000464275 SUCNR1Q9BXA5 334 aa18.39■□□□□ 0.53
PDLIM2-216ENST00000464275 ZNF835Q9Y2P0 537 aa18.39■□□□□ 0.53
PDLIM2-216ENST00000464275 MSGN1A6NI15 193 aa18.39■□□□□ 0.53
PDLIM2-216ENST00000464275 SIRPB1O00241 398 aa18.39■□□□□ 0.53
PDLIM2-216ENST00000464275 CRYAAP02489 173 aa18.39■□□□□ 0.53
PDLIM2-216ENST00000464275 FAM157CP0CG43 387 aa18.39■□□□□ 0.53
PDLIM2-216ENST00000464275 C20orf204Q6ZNR8 217 aa18.39■□□□□ 0.53
PDLIM2-216ENST00000464275 MRGPRGQ86SM5 289 aa18.39■□□□□ 0.53
PDLIM2-216ENST00000464275 FAM185AQ8N0U4 392 aa18.39■□□□□ 0.53
PDLIM2-216ENST00000464275 OR4A4PQ8NGN8 299 aa18.39■□□□□ 0.53
PDLIM2-216ENST00000464275 CFAP47Q6ZTR5 3102 aa18.38■□□□□ 0.53
PDLIM2-216ENST00000464275 SPTBN2O15020 2390 aa18.38■□□□□ 0.53
PDLIM2-216ENST00000464275 IGHV3-64DA0A0J9YX35 117 aa18.38■□□□□ 0.53
PDLIM2-216ENST00000464275 BMP5P22003 454 aa18.38■□□□□ 0.53
PDLIM2-216ENST00000464275 UCNP55089 124 aa18.38■□□□□ 0.53
PDLIM2-216ENST00000464275 HLA-DRB3P79483 266 aa18.38■□□□□ 0.53
PDLIM2-216ENST00000464275 PJVKQ0ZLH3 352 aa18.38■□□□□ 0.53
PDLIM2-216ENST00000464275 TMEM187Q14656 261 aa18.38■□□□□ 0.53
PDLIM2-216ENST00000464275 HERPUD1Q15011 391 aa18.38■□□□□ 0.53
PDLIM2-216ENST00000464275 IAH1Q2TAA2 248 aaPredicted RBP18.38■□□□□ 0.53
PDLIM2-216ENST00000464275 PHLDA2Q53GA4 152 aa18.38■□□□□ 0.53
PDLIM2-216ENST00000464275 MOB1BQ7L9L4 216 aa18.38■□□□□ 0.53
PDLIM2-216ENST00000464275 SMIM8Q96KF7 97 aa18.38■□□□□ 0.53
PDLIM2-216ENST00000464275 PLEKHA2Q9HB19 425 aa18.38■□□□□ 0.53
PDLIM2-216ENST00000464275 A0A0G2JNJ9 132 aa18.37■□□□□ 0.53
PDLIM2-216ENST00000464275 TUSC2O75896 110 aa18.37■□□□□ 0.53
PDLIM2-216ENST00000464275 ALKBH2Q6NS38 261 aa18.37■□□□□ 0.53
PDLIM2-216ENST00000464275 C5orf24Q7Z6I8 188 aa18.37■□□□□ 0.53
PDLIM2-216ENST00000464275 MSL2Q9HCI7 577 aa18.37■□□□□ 0.53
PDLIM2-216ENST00000464275 Q9UFV3 132 aa18.37■□□□□ 0.53
PDLIM2-216ENST00000464275 GLRXP35754 106 aa18.37■□□□□ 0.53
PDLIM2-216ENST00000464275 S100A10P60903 97 aa18.37■□□□□ 0.53
PDLIM2-216ENST00000464275 BLOC1S1P78537 153 aa18.37■□□□□ 0.53
PDLIM2-216ENST00000464275 ZNF497Q6ZNH5 498 aa18.37■□□□□ 0.53
PDLIM2-216ENST00000464275 SPAG16Q8N0X2 631 aa18.37■□□□□ 0.53
PDLIM2-216ENST00000464275 LRTM2Q8N967 370 aa18.37■□□□□ 0.53
PDLIM2-216ENST00000464275 GSKIPQ9P0R6 139 aa18.37■□□□□ 0.53
PDLIM2-216ENST00000464275 POMT1Q9Y6A1 747 aa18.37■□□□□ 0.53
PDLIM2-216ENST00000464275 IGKV1-6A0A0C4DH72 117 aa18.36■□□□□ 0.53
PDLIM2-216ENST00000464275 A6NLC8 198 aa18.36■□□□□ 0.53
PDLIM2-216ENST00000464275 DEDDO75618 318 aa18.36■□□□□ 0.53
PDLIM2-216ENST00000464275 JTBO76095 146 aa18.36■□□□□ 0.53
PDLIM2-216ENST00000464275 OR5AC1P0C628 307 aa18.36■□□□□ 0.53
PDLIM2-216ENST00000464275 HKR1P10072 659 aa18.36■□□□□ 0.53
PDLIM2-216ENST00000464275 FAM27E3Q08E93 113 aa18.36■□□□□ 0.53
PDLIM2-216ENST00000464275 PRAMEF6Q5VXH4 476 aa18.36■□□□□ 0.53
PDLIM2-216ENST00000464275 ZNF826PQ6ZT77 177 aa18.36■□□□□ 0.53
PDLIM2-216ENST00000464275 GAPTQ8N292 157 aa18.36■□□□□ 0.53
PDLIM2-216ENST00000464275 ZNF565Q8N9K5 539 aa18.36■□□□□ 0.53
PDLIM2-216ENST00000464275 SNRNP40Q96DI7 357 aaKnown RBP18.36■□□□□ 0.53
PDLIM2-216ENST00000464275 SEC11CQ9BY50 192 aa18.36■□□□□ 0.53
PDLIM2-216ENST00000464275 PRELID1Q9Y255 219 aa18.36■□□□□ 0.53
PDLIM2-216ENST00000464275 ZNF705EA8MWA4 302 aaPredicted RBP18.35■□□□□ 0.53
PDLIM2-216ENST00000464275 K7EPK0 472 aa18.35■□□□□ 0.53
PDLIM2-216ENST00000464275 KCNAB3O43448 404 aa18.35■□□□□ 0.53
PDLIM2-216ENST00000464275 HAND1O96004 215 aa18.35■□□□□ 0.53
PDLIM2-216ENST00000464275 KCNJ3P48549 501 aa18.35■□□□□ 0.53
PDLIM2-216ENST00000464275 RND3P61587 244 aa18.35■□□□□ 0.53
PDLIM2-216ENST00000464275 WDR82Q6UXN9 313 aa18.35■□□□□ 0.53
PDLIM2-216ENST00000464275 LIAT1Q6ZQX7 453 aa18.35■□□□□ 0.53
PDLIM2-216ENST00000464275 FAM71E2Q8N5Q1 922 aa18.35■□□□□ 0.53
PDLIM2-216ENST00000464275 OR11L1Q8NGX0 322 aa18.35■□□□□ 0.53
PDLIM2-216ENST00000464275 PLPPR1Q8TBJ4 325 aa18.35■□□□□ 0.53
PDLIM2-216ENST00000464275 USB1Q9BQ65 265 aaKnown RBP18.35■□□□□ 0.53
PDLIM2-216ENST00000464275 CABLES2Q9BTV7 478 aa18.35■□□□□ 0.53
PDLIM2-216ENST00000464275 TAF9BQ9HBM6 251 aa18.35■□□□□ 0.53
PDLIM2-216ENST00000464275 ELOVL5Q9NYP7 299 aa18.35■□□□□ 0.53
PDLIM2-216ENST00000464275 ANKRD11Q6UB99 2663 aaPredicted RBP18.35■□□□□ 0.53
PDLIM2-216ENST00000464275 IGHV3-13P01766 116 aa18.35■□□□□ 0.53
PDLIM2-216ENST00000464275 RCC1P18754 421 aaPredicted RBP18.35■□□□□ 0.53
PDLIM2-216ENST00000464275 NKX6-1P78426 367 aaPredicted RBP18.35■□□□□ 0.53
PDLIM2-216ENST00000464275 PCSK4Q6UW60 755 aa18.35■□□□□ 0.53
PDLIM2-216ENST00000464275 ACP7Q6ZNF0 438 aa18.35■□□□□ 0.53
PDLIM2-216ENST00000464275 C1QTNF9BB2RNN3 333 aa18.34■□□□□ 0.53
PDLIM2-216ENST00000464275 H2AFB1P0C5Y9 115 aa18.34■□□□□ 0.53
PDLIM2-216ENST00000464275 LMO1P25800 156 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms