RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 DMKNQ6E0U4 476 aaPredicted RBP11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 C10orf99Q6UWK7 81 aa11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 LINC00311Q8N616 119 aa11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 C5orf56Q8N8D9 126 aa11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 CHPT1Q8WUD6 406 aa11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 GHSRQ92847 366 aa11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 TMEM80Q96HE8 168 aa11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 C8orf4Q9NR00 106 aa11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 CHCHD3Q9NX63 227 aaKnown RBP11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 ZNF581Q9P0T4 197 aa11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 CKLFQ9UBR5 152 aa11.39□□□□□ -0.59
SNRNP40-203ENST00000463988 TRAV39A0A0B4J263 110 aa11.38□□□□□ -0.59
SNRNP40-203ENST00000463988 C15orf65H3BRN8 121 aa11.38□□□□□ -0.59
SNRNP40-203ENST00000463988 ORC5O43913 435 aa11.38□□□□□ -0.59
SNRNP40-203ENST00000463988 GAPDHP04406 335 aaKnown RBP11.38□□□□□ -0.59
SNRNP40-203ENST00000463988 SLC6A1P30531 599 aa11.38□□□□□ -0.59
SNRNP40-203ENST00000463988 GNG10P50151 68 aa11.38□□□□□ -0.59
SNRNP40-203ENST00000463988 DIAPH2-AS1Q14236 149 aa11.38□□□□□ -0.59
SNRNP40-203ENST00000463988 HES1Q14469 280 aa11.38□□□□□ -0.59
SNRNP40-203ENST00000463988 Q3ZCU0 254 aa11.38□□□□□ -0.59
SNRNP40-203ENST00000463988 Q499Y3 187 aa11.38□□□□□ -0.59
SNRNP40-203ENST00000463988 YIF1BQ5BJH7 314 aa11.38□□□□□ -0.59
SNRNP40-203ENST00000463988 CDH26Q8IXH8 852 aa11.38□□□□□ -0.59
SNRNP40-203ENST00000463988 PACRGLQ8N7B6 248 aa11.38□□□□□ -0.59
SNRNP40-203ENST00000463988 ZNF485Q8NCK3 441 aa11.38□□□□□ -0.59
SNRNP40-203ENST00000463988 SETD9Q8NE22 299 aa11.38□□□□□ -0.59
SNRNP40-203ENST00000463988 MRPS24Q96EL2 167 aaKnown RBP11.38□□□□□ -0.59
SNRNP40-203ENST00000463988 ZNF184Q99676 751 aaPredicted RBP11.38□□□□□ -0.59
SNRNP40-203ENST00000463988 SPACA1Q9HBV2 294 aa11.38□□□□□ -0.59
SNRNP40-203ENST00000463988 CCRL2O00421 344 aa11.37□□□□□ -0.59
SNRNP40-203ENST00000463988 HSD17B6O14756 317 aa11.37□□□□□ -0.59
SNRNP40-203ENST00000463988 LALBAP00709 142 aa11.37□□□□□ -0.59
SNRNP40-203ENST00000463988 IGKV1D-33P01593 117 aa11.37□□□□□ -0.59
SNRNP40-203ENST00000463988 IGKV1-33P01594 117 aa11.37□□□□□ -0.59
SNRNP40-203ENST00000463988 IGHG2P01859 326 aa11.37□□□□□ -0.59
SNRNP40-203ENST00000463988 MT-ND4P03905 459 aa11.37□□□□□ -0.59
SNRNP40-203ENST00000463988 FSTP19883 344 aa11.37□□□□□ -0.59
SNRNP40-203ENST00000463988 SERPINA2P20848 420 aa11.37□□□□□ -0.59
SNRNP40-203ENST00000463988 RPS11P62280 158 aaKnown RBP eCLIP11.37□□□□□ -0.59
SNRNP40-203ENST00000463988 HNF4GQ14541 408 aa11.37□□□□□ -0.59
SNRNP40-203ENST00000463988 SLC22A6Q4U2R8 563 aa11.37□□□□□ -0.59
SNRNP40-203ENST00000463988 KHDC1LQ5JSQ8 128 aa11.37□□□□□ -0.59
SNRNP40-203ENST00000463988 ZNF497Q6ZNH5 498 aa11.37□□□□□ -0.59
SNRNP40-203ENST00000463988 STX19Q8N4C7 294 aa11.37□□□□□ -0.59
SNRNP40-203ENST00000463988 COMMD1Q8N668 190 aa11.37□□□□□ -0.59
SNRNP40-203ENST00000463988 ARL11Q969Q4 196 aa11.37□□□□□ -0.59
SNRNP40-203ENST00000463988 PGLYRP3Q96LB9 341 aa11.37□□□□□ -0.59
SNRNP40-203ENST00000463988 GPR61Q9BZJ8 451 aa11.37□□□□□ -0.59
SNRNP40-203ENST00000463988 ZFP57Q9NU63 452 aa11.37□□□□□ -0.59
SNRNP40-203ENST00000463988 CLEC2DQ9UHP7 191 aa11.37□□□□□ -0.59
SNRNP40-203ENST00000463988 TRBV5-7A0A0A0MS05 114 aa11.36□□□□□ -0.59
SNRNP40-203ENST00000463988 IGHV1-3A0A0C4DH29 117 aa11.36□□□□□ -0.59
SNRNP40-203ENST00000463988 SERPINE3A8MV23 424 aa11.36□□□□□ -0.59
SNRNP40-203ENST00000463988 SDCBPO00560 298 aaPredicted RBP11.36□□□□□ -0.59
SNRNP40-203ENST00000463988 TAS2R43P59537 309 aa11.36□□□□□ -0.59
SNRNP40-203ENST00000463988 RPL23AP62750 156 aaKnown RBP11.36□□□□□ -0.59
SNRNP40-203ENST00000463988 ADARB1P78563 741 aaKnown RBP11.36□□□□□ -0.59
SNRNP40-203ENST00000463988 TMEM30BQ3MIR4 351 aa11.36□□□□□ -0.59
SNRNP40-203ENST00000463988 ATAD3CQ5T2N8 411 aa11.36□□□□□ -0.59
SNRNP40-203ENST00000463988 ZNF329Q86UD4 541 aa11.36□□□□□ -0.59
SNRNP40-203ENST00000463988 TGIF2LXQ8IUE1 241 aa11.36□□□□□ -0.59
SNRNP40-203ENST00000463988 IZUMO1Q8IYV9 350 aa11.36□□□□□ -0.59
SNRNP40-203ENST00000463988 LINC00482Q8N8I6 264 aa11.36□□□□□ -0.59
SNRNP40-203ENST00000463988 OR51D1Q8NGF3 324 aa11.36□□□□□ -0.59
SNRNP40-203ENST00000463988 OR13C5Q8NGS8 318 aa11.36□□□□□ -0.59
SNRNP40-203ENST00000463988 CYGBQ8WWM9 190 aa11.36□□□□□ -0.59
SNRNP40-203ENST00000463988 ST6GALNAC6Q969X2 333 aa11.36□□□□□ -0.59
SNRNP40-203ENST00000463988 ORAI1Q96D31 301 aa11.36□□□□□ -0.59
SNRNP40-203ENST00000463988 RAB9BQ9NP90 201 aa11.36□□□□□ -0.59
SNRNP40-203ENST00000463988 GFOD1Q9NXC2 390 aa11.36□□□□□ -0.59
SNRNP40-203ENST00000463988 RCC2Q9P258 522 aaKnown RBP11.36□□□□□ -0.59
SNRNP40-203ENST00000463988 TRAV8-7A0A075B6U6 113 aa11.35□□□□□ -0.59
SNRNP40-203ENST00000463988 A0A1W2PP11 408 aa11.35□□□□□ -0.59
SNRNP40-203ENST00000463988 A0A1W2PPE3 182 aa11.35□□□□□ -0.59
SNRNP40-203ENST00000463988 CA11O75493 328 aa11.35□□□□□ -0.59
SNRNP40-203ENST00000463988 CD1AP06126 327 aa11.35□□□□□ -0.59
SNRNP40-203ENST00000463988 IL3RAP26951 378 aa11.35□□□□□ -0.59
SNRNP40-203ENST00000463988 SLC35B1P78383 322 aa11.35□□□□□ -0.59
SNRNP40-203ENST00000463988 ST3GAL4Q11206 333 aa11.35□□□□□ -0.59
SNRNP40-203ENST00000463988 SLC35E3Q7Z769 313 aa11.35□□□□□ -0.59
SNRNP40-203ENST00000463988 MOB3BQ86TA1 216 aa11.35□□□□□ -0.59
SNRNP40-203ENST00000463988 FOXRED2Q8IWF2 684 aa11.35□□□□□ -0.59
SNRNP40-203ENST00000463988 GAPTQ8N292 157 aa11.35□□□□□ -0.59
SNRNP40-203ENST00000463988 DHRSXQ8N5I4 330 aa11.35□□□□□ -0.59
SNRNP40-203ENST00000463988 Q8N6K4 173 aa11.35□□□□□ -0.59
SNRNP40-203ENST00000463988 OR2T10Q8NGZ9 312 aa11.35□□□□□ -0.59
SNRNP40-203ENST00000463988 NEK7Q8TDX7 302 aa11.35□□□□□ -0.59
SNRNP40-203ENST00000463988 CCDC107Q8WV48 283 aa11.35□□□□□ -0.59
SNRNP40-203ENST00000463988 GGHQ92820 318 aa11.35□□□□□ -0.59
SNRNP40-203ENST00000463988 EAF1Q96JC9 268 aaPredicted RBP11.35□□□□□ -0.59
SNRNP40-203ENST00000463988 NOL4LQ96MY1 436 aaPredicted RBP11.35□□□□□ -0.59
SNRNP40-203ENST00000463988 CNOT2Q9NZN8 540 aaKnown RBP11.35□□□□□ -0.59
SNRNP40-203ENST00000463988 MRPS28Q9Y2Q9 187 aaKnown RBP11.35□□□□□ -0.59
SNRNP40-203ENST00000463988 MAGEA13PA6NCF6 341 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 FAM90A10PA6NDY2 464 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 EFCAB10A6NFE3 127 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 FAM90A7PA6NKC0 464 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 FAM90A23PA8MXZ1 464 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 MCRIP1C9JLW8 97 aa11.34□□□□□ -0.59
SNRNP40-203ENST00000463988 AIPO00170 330 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms