RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 SSTR5P35346 364 aa13.06□□□□□ -0.32
COL1A1-202ENST00000463440 EFNB2P52799 333 aa13.06□□□□□ -0.32
COL1A1-202ENST00000463440 GP2P55259 537 aaKnown RBP13.06□□□□□ -0.32
COL1A1-202ENST00000463440 MLLT11Q13015 90 aaPredicted RBP13.06□□□□□ -0.32
COL1A1-202ENST00000463440 TPBGQ13641 420 aa13.06□□□□□ -0.32
COL1A1-202ENST00000463440 TRAM1Q15629 374 aa13.06□□□□□ -0.32
COL1A1-202ENST00000463440 LTC4SQ16873 150 aa13.06□□□□□ -0.32
COL1A1-202ENST00000463440 TPTE2P1Q5T6R2 138 aa13.06□□□□□ -0.32
COL1A1-202ENST00000463440 RAB12Q6IQ22 244 aa13.06□□□□□ -0.32
COL1A1-202ENST00000463440 TREML4Q6UXN2 200 aa13.06□□□□□ -0.32
COL1A1-202ENST00000463440 ZNF497Q6ZNH5 498 aa13.06□□□□□ -0.32
COL1A1-202ENST00000463440 SLC16A12Q6ZSM3 486 aa13.06□□□□□ -0.32
COL1A1-202ENST00000463440 TMEM104Q8NE00 496 aa13.06□□□□□ -0.32
COL1A1-202ENST00000463440 TMEM203Q969S6 136 aa13.06□□□□□ -0.32
COL1A1-202ENST00000463440 CST11Q9H112 138 aa13.06□□□□□ -0.32
COL1A1-202ENST00000463440 MMP28Q9H239 520 aa13.06□□□□□ -0.32
COL1A1-202ENST00000463440 RCC2Q9P258 522 aaKnown RBP13.06□□□□□ -0.32
COL1A1-202ENST00000463440 SIGLEC9Q9Y336 463 aa13.06□□□□□ -0.32
COL1A1-202ENST00000463440 J3QR06 171 aa13.05□□□□□ -0.32
COL1A1-202ENST00000463440 AIPO00170 330 aa13.05□□□□□ -0.32
COL1A1-202ENST00000463440 MT-ND4P03905 459 aa13.05□□□□□ -0.32
COL1A1-202ENST00000463440 UCHL1P09936 223 aa13.05□□□□□ -0.32
COL1A1-202ENST00000463440 FUT3P21217 361 aa13.05□□□□□ -0.32
COL1A1-202ENST00000463440 PSMA1P25786 263 aaKnown RBP13.05□□□□□ -0.32
COL1A1-202ENST00000463440 VHLP40337 213 aa13.05□□□□□ -0.32
COL1A1-202ENST00000463440 MNDAP41218 407 aa13.05□□□□□ -0.32
COL1A1-202ENST00000463440 CCDC144NLQ6NUI1 221 aa13.05□□□□□ -0.32
COL1A1-202ENST00000463440 LRRTM1Q86UE6 522 aa13.05□□□□□ -0.32
COL1A1-202ENST00000463440 CCDC107Q8WV48 283 aa13.05□□□□□ -0.32
COL1A1-202ENST00000463440 ARL11Q969Q4 196 aa13.05□□□□□ -0.32
COL1A1-202ENST00000463440 Q96M66 194 aa13.05□□□□□ -0.32
COL1A1-202ENST00000463440 PRSS22Q9GZN4 317 aa13.05□□□□□ -0.32
COL1A1-202ENST00000463440 RAB9BQ9NP90 201 aa13.05□□□□□ -0.32
COL1A1-202ENST00000463440 ETAA1Q9NY74 926 aa13.05□□□□□ -0.32
COL1A1-202ENST00000463440 PEX16Q9Y5Y5 336 aa13.05□□□□□ -0.32
COL1A1-202ENST00000463440 MGAM2Q2M2H8 2515 aa13.04□□□□□ -0.32
COL1A1-202ENST00000463440 LY6LH3BQJ8 138 aa13.04□□□□□ -0.32
COL1A1-202ENST00000463440 ORC5O43913 435 aa13.04□□□□□ -0.32
COL1A1-202ENST00000463440 IGHV3-7P01780 117 aa13.04□□□□□ -0.32
COL1A1-202ENST00000463440 GLAP06280 429 aa13.04□□□□□ -0.32
COL1A1-202ENST00000463440 CPEP16870 476 aa13.04□□□□□ -0.32
COL1A1-202ENST00000463440 C1orf100Q5SVJ3 147 aa13.04□□□□□ -0.32
COL1A1-202ENST00000463440 UTF1Q5T230 341 aa13.04□□□□□ -0.32
COL1A1-202ENST00000463440 Q6ZTK2 550 aa13.04□□□□□ -0.32
COL1A1-202ENST00000463440 C16orf82Q7Z2V1 217 aa13.04□□□□□ -0.32
COL1A1-202ENST00000463440 CAPSLQ8WWF8 208 aa13.04□□□□□ -0.32
COL1A1-202ENST00000463440 LEAP2Q969E1 77 aa13.04□□□□□ -0.32
COL1A1-202ENST00000463440 TOMM40LQ969M1 308 aa13.04□□□□□ -0.32
COL1A1-202ENST00000463440 FAM46BQ96A09 425 aa13.04□□□□□ -0.32
COL1A1-202ENST00000463440 RPEQ96AT9 228 aa13.04□□□□□ -0.32
COL1A1-202ENST00000463440 AKR1E2Q96JD6 320 aa13.04□□□□□ -0.32
COL1A1-202ENST00000463440 MGLLQ99685 303 aa13.04□□□□□ -0.32
COL1A1-202ENST00000463440 ZNF702PQ9H963 129 aa13.04□□□□□ -0.32
COL1A1-202ENST00000463440 TRAPPC2LQ9UL33 140 aa13.04□□□□□ -0.32
COL1A1-202ENST00000463440 PSG11Q9UQ72 335 aa13.04□□□□□ -0.32
COL1A1-202ENST00000463440 CA11O75493 328 aa13.03□□□□□ -0.32
COL1A1-202ENST00000463440 ARL6IP5O75915 188 aa13.03□□□□□ -0.32
COL1A1-202ENST00000463440 MPIG6BO95866 241 aa13.03□□□□□ -0.32
COL1A1-202ENST00000463440 MAP2K4P45985 399 aa13.03□□□□□ -0.32
COL1A1-202ENST00000463440 GNG10P50151 68 aa13.03□□□□□ -0.32
COL1A1-202ENST00000463440 RPS25P62851 125 aaKnown RBP13.03□□□□□ -0.32
COL1A1-202ENST00000463440 MADCAM1Q13477 382 aa13.03□□□□□ -0.32
COL1A1-202ENST00000463440 HERPUD1Q15011 391 aa13.03□□□□□ -0.32
COL1A1-202ENST00000463440 TBCEQ15813 527 aaPredicted RBP13.03□□□□□ -0.32
COL1A1-202ENST00000463440 ARSJQ5FYB0 599 aaPredicted RBP13.03□□□□□ -0.32
COL1A1-202ENST00000463440 C6orf183Q5T699 404 aa13.03□□□□□ -0.32
COL1A1-202ENST00000463440 Q8N2B8 174 aa13.03□□□□□ -0.32
COL1A1-202ENST00000463440 KLHDC1Q8N7A1 406 aa13.03□□□□□ -0.32
COL1A1-202ENST00000463440 OR52M1Q8NGK5 317 aa13.03□□□□□ -0.32
COL1A1-202ENST00000463440 Q9H521 79 aa13.03□□□□□ -0.32
COL1A1-202ENST00000463440 C15orf65H3BRN8 121 aa13.02□□□□□ -0.33
COL1A1-202ENST00000463440 SDCBPO00560 298 aaPredicted RBP13.02□□□□□ -0.33
COL1A1-202ENST00000463440 SPINT2O43291 252 aa13.02□□□□□ -0.33
COL1A1-202ENST00000463440 PDCD6O75340 191 aa13.02□□□□□ -0.33
COL1A1-202ENST00000463440 VSIG10L2P0DP72 767 aa13.02□□□□□ -0.33
COL1A1-202ENST00000463440 VSIG8P0DPA2 414 aa13.02□□□□□ -0.33
COL1A1-202ENST00000463440 CD24P25063 80 aa13.02□□□□□ -0.33
COL1A1-202ENST00000463440 HTR2CP28335 458 aa13.02□□□□□ -0.33
COL1A1-202ENST00000463440 SYT6Q5T7P8 510 aaPredicted RBP13.02□□□□□ -0.33
COL1A1-202ENST00000463440 TRAT1Q6PIZ9 186 aa13.02□□□□□ -0.33
COL1A1-202ENST00000463440 TMEM91Q6ZNR0 172 aa13.02□□□□□ -0.33
COL1A1-202ENST00000463440 ZNF367Q7RTV3 350 aa13.02□□□□□ -0.33
COL1A1-202ENST00000463440 OR6M1Q8NGM8 313 aa13.02□□□□□ -0.33
COL1A1-202ENST00000463440 OR10X1Q8NGY0 326 aa13.02□□□□□ -0.33
COL1A1-202ENST00000463440 OR4K15Q8NH41 348 aa13.02□□□□□ -0.33
COL1A1-202ENST00000463440 KCNG3Q8TAE7 436 aa13.02□□□□□ -0.33
COL1A1-202ENST00000463440 NEDD4LQ96PU5 975 aa13.02□□□□□ -0.33
COL1A1-202ENST00000463440 TMEM59Q9BXS4 323 aa13.02□□□□□ -0.33
COL1A1-202ENST00000463440 LIN7BQ9HAP6 207 aa13.02□□□□□ -0.33
COL1A1-202ENST00000463440 UBE2QL1A1L167 161 aa13.01□□□□□ -0.33
COL1A1-202ENST00000463440 SLC22A1O15245 554 aa13.01□□□□□ -0.33
COL1A1-202ENST00000463440 PEX14O75381 377 aa13.01□□□□□ -0.33
COL1A1-202ENST00000463440 CD37P11049 281 aa13.01□□□□□ -0.33
COL1A1-202ENST00000463440 RAB7AP51149 207 aa13.01□□□□□ -0.33
COL1A1-202ENST00000463440 HABP2Q14520 560 aaPredicted RBP13.01□□□□□ -0.33
COL1A1-202ENST00000463440 TMEM30BQ3MIR4 351 aa13.01□□□□□ -0.33
COL1A1-202ENST00000463440 SIGIRRQ6IA17 410 aa13.01□□□□□ -0.33
COL1A1-202ENST00000463440 GAPTQ8N292 157 aa13.01□□□□□ -0.33
COL1A1-202ENST00000463440 UBALD1Q8TB05 177 aa13.01□□□□□ -0.33
COL1A1-202ENST00000463440 SLC25A33Q9BSK2 321 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms