RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 MIXL1Q9H2W2 232 aa12.44□□□□□ -0.42
SND1-203ENST00000463020 LIN7BQ9HAP6 207 aa12.44□□□□□ -0.42
SND1-203ENST00000463020 COMMD3Q9UBI1 195 aa12.44□□□□□ -0.42
SND1-203ENST00000463020 V9GYH0 126 aa12.44□□□□□ -0.42
SND1-203ENST00000463020 STARD9Q9P2P6 4700 aa12.44□□□□□ -0.42
SND1-203ENST00000463020 ACOD1A6NK06 481 aa12.43□□□□□ -0.42
SND1-203ENST00000463020 ARL6IP5O75915 188 aa12.43□□□□□ -0.42
SND1-203ENST00000463020 DUS4LO95620 317 aaKnown RBP12.43□□□□□ -0.42
SND1-203ENST00000463020 DUSP1P28562 367 aa12.43□□□□□ -0.42
SND1-203ENST00000463020 ROM1Q03395 351 aa12.43□□□□□ -0.42
SND1-203ENST00000463020 IL24Q13007 206 aa12.43□□□□□ -0.42
SND1-203ENST00000463020 DMKNQ6E0U4 476 aaPredicted RBP12.43□□□□□ -0.42
SND1-203ENST00000463020 C8orf86Q6ZUL3 223 aa12.43□□□□□ -0.42
SND1-203ENST00000463020 GDPD3Q7L5L3 318 aa12.43□□□□□ -0.42
SND1-203ENST00000463020 FAM220AQ7Z4H9 259 aa12.43□□□□□ -0.42
SND1-203ENST00000463020 KCTD20Q7Z5Y7 419 aa12.43□□□□□ -0.42
SND1-203ENST00000463020 OR4X2Q8NGF9 303 aa12.43□□□□□ -0.42
SND1-203ENST00000463020 SDHCQ99643 169 aaPredicted RBP12.43□□□□□ -0.42
SND1-203ENST00000463020 CLEC7AQ9BXN2 247 aa12.43□□□□□ -0.42
SND1-203ENST00000463020 POLDIP2Q9Y2S7 368 aa12.43□□□□□ -0.42
SND1-203ENST00000463020 SIRT4Q9Y6E7 314 aaPredicted RBP12.43□□□□□ -0.42
SND1-203ENST00000463020 CSMD3Q7Z407 3707 aa12.42□□□□□ -0.42
SND1-203ENST00000463020 FAM230AA0A1W2PPH8 454 aa12.42□□□□□ -0.42
SND1-203ENST00000463020 E9PI62 339 aa12.42□□□□□ -0.42
SND1-203ENST00000463020 GATBO75879 557 aaKnown RBP12.42□□□□□ -0.42
SND1-203ENST00000463020 OR2F2O95006 317 aa12.42□□□□□ -0.42
SND1-203ENST00000463020 SNRNP70P08621 437 aaKnown RBP12.42□□□□□ -0.42
SND1-203ENST00000463020 IL7P13232 177 aa12.42□□□□□ -0.42
SND1-203ENST00000463020 THBS3P49746 956 aa12.42□□□□□ -0.42
SND1-203ENST00000463020 TP53I3Q53FA7 332 aa12.42□□□□□ -0.42
SND1-203ENST00000463020 ACSM3Q53FZ2 586 aa12.42□□□□□ -0.42
SND1-203ENST00000463020 ZNF679Q8IYX0 411 aa12.42□□□□□ -0.42
SND1-203ENST00000463020 PHYHIPQ92561 330 aa12.42□□□□□ -0.42
SND1-203ENST00000463020 NOL4LQ96MY1 436 aaPredicted RBP12.42□□□□□ -0.42
SND1-203ENST00000463020 RBM14Q96PK6 669 aaKnown RBP12.42□□□□□ -0.42
SND1-203ENST00000463020 NEURL2Q9BR09 285 aa12.42□□□□□ -0.42
SND1-203ENST00000463020 GNG8Q9UK08 70 aa12.42□□□□□ -0.42
SND1-203ENST00000463020 HHLA2Q9UM44 414 aa12.42□□□□□ -0.42
SND1-203ENST00000463020 GTF2A1LQ9UNN4 478 aa12.42□□□□□ -0.42
SND1-203ENST00000463020 U3KQK5 164 aa12.42□□□□□ -0.42
SND1-203ENST00000463020 SMIM30A4D0T7 59 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 FAM25AB3EWG3 89 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 FAM25CB3EWG5 89 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 FAM25GB3EWG6 89 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 HTR1DP28221 377 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 TALDO1P37837 337 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 NPBWR2P48146 333 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 RPL23AP62750 156 aaKnown RBP12.41□□□□□ -0.42
SND1-203ENST00000463020 MEF2CQ06413 473 aaPredicted RBP12.41□□□□□ -0.42
SND1-203ENST00000463020 CDK5R1Q15078 307 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 UBE2V2Q15819 145 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 ZNF79Q15937 498 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 ODF4Q2M2E3 257 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 C9orf152Q5JTZ5 239 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 IDNKQ5T6J7 187 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 CNIH2Q6PI25 160 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 DEGS2Q6QHC5 323 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 ELMOD2Q8IZ81 293 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 OSR2Q8N2R0 312 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 GHSRQ92847 366 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 SMIM19Q96E16 107 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 SNX22Q96L94 193 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 ASCL2Q99929 193 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 PKIBQ9C010 78 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 ZNF286AQ9HBT8 521 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 RBFOX1Q9NWB1 397 aaKnown RBP12.41□□□□□ -0.42
SND1-203ENST00000463020 LINC00527Q9UJ94 153 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 IKZF2Q9UKS7 526 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 LINC00312Q9Y6C7 94 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 TMEM14AQ9Y6G1 99 aa12.41□□□□□ -0.42
SND1-203ENST00000463020 TRAV1-2A0A0B4J238 106 aa12.4□□□□□ -0.42
SND1-203ENST00000463020 TRBV2A0A0J9YWF9 115 aa12.4□□□□□ -0.42
SND1-203ENST00000463020 hADV38S2A0JD32 116 aa12.4□□□□□ -0.42
SND1-203ENST00000463020 PDCD5O14737 125 aa12.4□□□□□ -0.42
SND1-203ENST00000463020 HPGDSO60760 199 aa12.4□□□□□ -0.42
SND1-203ENST00000463020 HAND1O96004 215 aa12.4□□□□□ -0.42
SND1-203ENST00000463020 IGLV1-47P01700 117 aa12.4□□□□□ -0.42
SND1-203ENST00000463020 OR3A1P47881 315 aa12.4□□□□□ -0.42
SND1-203ENST00000463020 INPP1P49441 399 aa12.4□□□□□ -0.42
SND1-203ENST00000463020 LUMP51884 338 aaPredicted RBP12.4□□□□□ -0.42
SND1-203ENST00000463020 SNU13P55769 128 aaKnown RBP12.4□□□□□ -0.42
SND1-203ENST00000463020 ASAH1Q13510 395 aa12.4□□□□□ -0.42
SND1-203ENST00000463020 GRK1Q15835 563 aa12.4□□□□□ -0.42
SND1-203ENST00000463020 TRIQKQ629K1 86 aa12.4□□□□□ -0.42
SND1-203ENST00000463020 KCTD18Q6PI47 426 aaPredicted RBP12.4□□□□□ -0.42
SND1-203ENST00000463020 Q6ZSR3 168 aa12.4□□□□□ -0.42
SND1-203ENST00000463020 C16orf82Q7Z2V1 217 aa12.4□□□□□ -0.42
SND1-203ENST00000463020 OR2W3Q7Z3T1 314 aa12.4□□□□□ -0.42
SND1-203ENST00000463020 CADM3Q8N126 398 aa12.4□□□□□ -0.42
SND1-203ENST00000463020 ABHD12Q8N2K0 398 aa12.4□□□□□ -0.42
SND1-203ENST00000463020 PELI1Q96FA3 418 aa12.4□□□□□ -0.42
SND1-203ENST00000463020 PRR25Q96S07 402 aa12.4□□□□□ -0.42
SND1-203ENST00000463020 LSM4Q9Y4Z0 139 aaKnown RBP12.4□□□□□ -0.42
SND1-203ENST00000463020 PSMB11A5LHX3 300 aa12.39□□□□□ -0.43
SND1-203ENST00000463020 LY6LH3BQJ8 138 aa12.39□□□□□ -0.43
SND1-203ENST00000463020 BOLA2-SMG1P6H3BVE0 249 aa12.39□□□□□ -0.43
SND1-203ENST00000463020 RAB3BP20337 219 aa12.39□□□□□ -0.43
SND1-203ENST00000463020 GABRR1P24046 479 aa12.39□□□□□ -0.43
SND1-203ENST00000463020 RIDAP52758 137 aaKnown RBP12.39□□□□□ -0.43
SND1-203ENST00000463020 BCL2L15Q5TBC7 163 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms