RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 ZFYVE26Q68DK2 2539 aa3.88□□□□□ -1.79
CSMD3-205ENST00000462254 HRNRQ86YZ3 2850 aaPredicted RBP3.87□□□□□ -1.79
CSMD3-205ENST00000462254 DOCK11Q5JSL3 2073 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 IGHV2OR16-5A0A0B4J2B6 119 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 hCG_38984A0A1B0GV85 526 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 TRDV1A0A1B0GX56 115 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 A0A1W2PPV4 95 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 SMCO3A2RU48 225 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 FBLL1A6NHQ2 334 aaKnown RBP3.87□□□□□ -1.79
CSMD3-205ENST00000462254 M0R1B8 84 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 PIN1P1O15428 100 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 AIREO43918 545 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 CLPXO76031 633 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 OR2F2O95006 317 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 CLDN14O95500 239 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 NGFP01138 241 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 APOC1P02654 83 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 HLA-DPB1P04440 258 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 ISG15P05161 165 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 UBCP0CG48 685 aaKnown RBP3.87□□□□□ -1.79
CSMD3-205ENST00000462254 IGHV4-30-4P0DP06 118 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 IGHV4-31P0DP07 118 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 ZNF35P13682 527 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 PRF1P14222 555 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 CCL1P22362 96 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 PSMA1P25786 263 aaKnown RBP3.87□□□□□ -1.79
CSMD3-205ENST00000462254 FGF9P31371 208 aaPredicted RBP3.87□□□□□ -1.79
CSMD3-205ENST00000462254 ZNF83P51522 516 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 BCAP31P51572 246 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 TMBIM6P55061 237 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 SSBP2P81877 361 aaPredicted RBP3.87□□□□□ -1.79
CSMD3-205ENST00000462254 ZNF92Q03936 586 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 SRSF1Q07955 248 aaKnown RBP eCLIP3.87□□□□□ -1.79
CSMD3-205ENST00000462254 DAZAP2Q15038 168 aaPredicted RBP3.87□□□□□ -1.79
CSMD3-205ENST00000462254 TRAM1Q15629 374 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 SRSF7Q16629 238 aaKnown RBP eCLIP3.87□□□□□ -1.79
CSMD3-205ENST00000462254 MICBQ29980 383 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 TBC1D28Q2M2D7 210 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 TIMM50Q3ZCQ8 353 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 Q499Y3 187 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 LRRC37A5PQ49AS3 106 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 ACSM3Q53FZ2 586 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 YIF1BQ5BJH7 314 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 TMEM255AQ5JRV8 349 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 GLYATL3Q5SZD4 288 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 TMEM244Q5VVB8 128 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 ZNF626Q68DY1 528 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 C22orf42Q6IC83 251 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 Q6ZSR3 168 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 RFPL4BQ6ZWI9 263 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 MS4A15Q8N5U1 240 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 NEXN-AS1Q8NBZ9 246 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 SLC30A7Q8NEW0 376 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 OR1J1Q8NGS3 322 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 ZNF420Q8TAQ5 688 aaPredicted RBP3.87□□□□□ -1.79
CSMD3-205ENST00000462254 NDNFQ8TB73 568 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 OR51E1Q8TCB6 317 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 RAB2BQ8WUD1 216 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 RAB1CQ92928 201 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 RNASE6Q93091 150 aaKnown RBP3.87□□□□□ -1.79
CSMD3-205ENST00000462254 UPRTQ96BW1 309 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 WFIKKN1Q96NZ8 548 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 DERL3Q96Q80 235 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 KCNS3Q9BQ31 491 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 SLC30A2Q9BRI3 323 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 OR51B6Q9H340 312 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 TREM1Q9NP99 234 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 GPR84Q9NQS5 396 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 NUDT15Q9NV35 164 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 PTTG3PQ9NZH4 202 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 RSL24D1Q9UHA3 163 aaKnown RBP3.87□□□□□ -1.79
CSMD3-205ENST00000462254 HHLA2Q9UM44 414 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 SSR3Q9UNL2 185 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 STARD10Q9Y365 291 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 OR2W1Q9Y3N9 320 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 WIPI2Q9Y4P8 454 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 CSDC2Q9Y534 153 aaKnown RBP3.87□□□□□ -1.79
CSMD3-205ENST00000462254 V9GYS6 101 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 FAM208BQ5VWN6 2430 aa3.87□□□□□ -1.79
CSMD3-205ENST00000462254 SMG1Q96Q15 3661 aaKnown RBP3.87□□□□□ -1.79
CSMD3-205ENST00000462254 TRAV8-7A0A075B6U6 113 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 A0A1B0GVI7 797 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 A0A1W2PPE3 182 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 LOC390937A0A1W2PQ73 354 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 DPRXA6NFQ7 191 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 TUBAL3A6NHL2 446 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 A6NIN4 97 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 ATP6V1G2-DDX39BF2Z307 99 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 C19orf84I3L1E1 186 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 SLC22A1O15245 554 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 XRCC2O43543 280 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 GATBO75879 557 aaKnown RBP3.86□□□□□ -1.79
CSMD3-205ENST00000462254 MBP02144 154 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 FCER2P06734 321 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 ERCC1P07992 297 aaPredicted RBP3.86□□□□□ -1.79
CSMD3-205ENST00000462254 UCHL1P09936 223 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 OCM2P0CE71 109 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 SSTR2P30874 369 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 PPP1CBP62140 327 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 FAM3AP98173 230 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms