RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 PAGE3Q5JUK9 113 aa3.65□□□□□ -1.83
COPS3-204ENST00000462236 OTPQ5XKR4 325 aa3.65□□□□□ -1.83
COPS3-204ENST00000462236 UNQ9370/PRO34162Q6UXP9 181 aa3.65□□□□□ -1.83
COPS3-204ENST00000462236 FUNDC1Q8IVP5 155 aa3.65□□□□□ -1.83
COPS3-204ENST00000462236 OR52H1Q8NGJ2 320 aa3.65□□□□□ -1.83
COPS3-204ENST00000462236 OR9Q1Q8NGQ5 310 aa3.65□□□□□ -1.83
COPS3-204ENST00000462236 OR10Z1Q8NGY1 313 aa3.65□□□□□ -1.83
COPS3-204ENST00000462236 RPS4Y2Q8TD47 263 aa3.65□□□□□ -1.83
COPS3-204ENST00000462236 LRRC29Q8WV35 223 aa3.65□□□□□ -1.83
COPS3-204ENST00000462236 TMEM239Q8WW34 195 aa3.65□□□□□ -1.83
COPS3-204ENST00000462236 SLCO4A1Q96BD0 722 aa3.65□□□□□ -1.83
COPS3-204ENST00000462236 TAMM41Q96BW9 452 aa3.65□□□□□ -1.83
COPS3-204ENST00000462236 RBMXL1Q96E39 390 aaKnown RBP3.65□□□□□ -1.83
COPS3-204ENST00000462236 PKNOX2Q96KN3 472 aa3.65□□□□□ -1.83
COPS3-204ENST00000462236 ZBTB18Q99592 522 aa3.65□□□□□ -1.83
COPS3-204ENST00000462236 CABLES2Q9BTV7 478 aa3.65□□□□□ -1.83
COPS3-204ENST00000462236 ADAT1Q9BUB4 502 aaKnown RBP3.65□□□□□ -1.83
COPS3-204ENST00000462236 POLR2J2Q9GZM3 115 aaKnown RBP3.65□□□□□ -1.83
COPS3-204ENST00000462236 POLR2J3Q9H1A7 115 aaKnown RBP3.65□□□□□ -1.83
COPS3-204ENST00000462236 PITPNC1Q9UKF7 332 aa3.65□□□□□ -1.83
COPS3-204ENST00000462236 ANGPT4Q9Y264 503 aa3.65□□□□□ -1.83
COPS3-204ENST00000462236 TBL2Q9Y4P3 447 aaKnown RBP3.65□□□□□ -1.83
COPS3-204ENST00000462236 HSPG2P98160 4391 aa3.65□□□□□ -1.83
COPS3-204ENST00000462236 IGLV4-3A0A075B6K6 122 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 TRAV27A0A087WT01 109 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 IGLV1-36A0A0B4J1U3 117 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 SMIM23A6NLE4 172 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 DCTN6O00399 190 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 OR5F1O95221 314 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 TFF1P04155 84 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 CD14P08571 375 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 PPIBP23284 216 aaKnown RBP3.64□□□□□ -1.83
COPS3-204ENST00000462236 AQP1P29972 269 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 CAPGP40121 348 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 GSK3BP49841 420 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 GZMMP51124 257 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 SNAI3Q3KNW1 292 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 KLHL12Q53G59 568 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 DLEU7Q6UYE1 221 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 PGAP1Q75T13 922 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 CCDC80Q76M96 950 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 OR2W3Q7Z3T1 314 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 GVQW1Q8N7I0 195 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 EIF1ADQ8N9N8 165 aaKnown RBP3.64□□□□□ -1.83
COPS3-204ENST00000462236 OR1M1Q8NGA1 313 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 OR11H6Q8NGC7 330 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 OR51D1Q8NGF3 324 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 OR4X2Q8NGF9 303 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 OR56B2PQ8NGI1 322 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 MALSU1Q96EH3 234 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 Q96M85 177 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 GPX7Q96SL4 187 aaPredicted RBP3.64□□□□□ -1.83
COPS3-204ENST00000462236 HEXA-AS1Q9H8Q6 139 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 PALMDQ9NP74 551 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 VNN3Q9NY84 501 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 RIMS3Q9UJD0 308 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 AURKCQ9UQB9 309 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 MOB4Q9Y3A3 225 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 SMAD5-AS1Q9Y6J3 95 aa3.64□□□□□ -1.83
COPS3-204ENST00000462236 IGKV1D-17A0A075B6S4 117 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 SMIM30A4D0T7 59 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 SRRM4A7MD48 611 aaKnown RBP3.63□□□□□ -1.83
COPS3-204ENST00000462236 C17orf98A8MV24 154 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 BHLHE40O14503 412 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 CDC42EP2O14613 210 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 SLC16A7O60669 478 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 SNNO75324 88 aaPredicted RBP3.63□□□□□ -1.83
COPS3-204ENST00000462236 TXNDC12O95881 172 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 PGA5P0DJD9 388 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 ZNF823P16415 610 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 GLRA1P23415 457 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 GGT2P36268 569 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 MDH1P40925 334 aaKnown RBP3.63□□□□□ -1.83
COPS3-204ENST00000462236 CEBPDP49716 269 aaPredicted RBP3.63□□□□□ -1.83
COPS3-204ENST00000462236 FXYD6P3P58550 94 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 PRKCDQ05655 676 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 ECH1Q13011 328 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 SELPLGQ14242 412 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 RFX4Q33E94 735 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 GLYATL3Q5SZD4 288 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 C9orf66Q5T8R8 295 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 DPY19L4Q7Z388 723 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 TSEN54Q7Z6J9 526 aaKnown RBP3.63□□□□□ -1.83
COPS3-204ENST00000462236 CALHM1Q8IU99 346 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 IFT20Q8IY31 132 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 OSR2Q8N2R0 312 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 CYB561A3Q8NBI2 242 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 ZNF485Q8NCK3 441 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 SLC26A10Q8NG04 563 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 OR2AE1Q8NHA4 323 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 SPRYD4Q8WW59 207 aaPredicted RBP3.63□□□□□ -1.83
COPS3-204ENST00000462236 H1FXQ92522 213 aaKnown RBP3.63□□□□□ -1.83
COPS3-204ENST00000462236 SDSLQ96GA7 329 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 OR52B2Q96RD2 323 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 VGLL1Q99990 258 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 OCR1Q9BZK8 76 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 FGF23Q9GZV9 251 aaPredicted RBP3.63□□□□□ -1.83
COPS3-204ENST00000462236 SYT4Q9H2B2 425 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 MOB1AQ9H8S9 216 aa3.63□□□□□ -1.83
COPS3-204ENST00000462236 NMNAT1Q9HAN9 279 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms