RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 FAM90A20PA6NIJ5 464 aa12.4□□□□□ -0.42
VARS-219ENST00000461328 FAM90A7PA6NKC0 464 aa12.4□□□□□ -0.42
VARS-219ENST00000461328 FAM90A22PA8MWA6 464 aa12.4□□□□□ -0.42
VARS-219ENST00000461328 FAM90A12PA8MX19 464 aa12.4□□□□□ -0.42
VARS-219ENST00000461328 FAM90A5PA8MXJ8 464 aa12.4□□□□□ -0.42
VARS-219ENST00000461328 FAM90A23PA8MXZ1 464 aa12.4□□□□□ -0.42
VARS-219ENST00000461328 LEUTXA8MZ59 168 aa12.4□□□□□ -0.42
VARS-219ENST00000461328 CHST1O43916 411 aa12.4□□□□□ -0.42
VARS-219ENST00000461328 FAM90A15PP0C7V4 464 aa12.4□□□□□ -0.42
VARS-219ENST00000461328 FAM90A13PP0C7W8 464 aa12.4□□□□□ -0.42
VARS-219ENST00000461328 FAM90A14PP0C7W9 464 aa12.4□□□□□ -0.42
VARS-219ENST00000461328 FAM90A24PP0C7X0 464 aa12.4□□□□□ -0.42
VARS-219ENST00000461328 JUNBP17275 347 aaPredicted RBP12.4□□□□□ -0.42
VARS-219ENST00000461328 CALRP27797 417 aaKnown RBP12.4□□□□□ -0.42
VARS-219ENST00000461328 HTR2CP28335 458 aa12.4□□□□□ -0.42
VARS-219ENST00000461328 KIR2DS4P43632 304 aa12.4□□□□□ -0.42
VARS-219ENST00000461328 GP2P55259 537 aaKnown RBP12.4□□□□□ -0.42
VARS-219ENST00000461328 NKAPLQ5M9Q1 402 aa12.4□□□□□ -0.42
VARS-219ENST00000461328 LYPD6Q86Y78 171 aa12.4□□□□□ -0.42
VARS-219ENST00000461328 OR9G1Q8NH87 305 aa12.4□□□□□ -0.42
VARS-219ENST00000461328 OR2T6Q8NHC8 308 aa12.4□□□□□ -0.42
VARS-219ENST00000461328 LEAP2Q969E1 77 aa12.4□□□□□ -0.42
VARS-219ENST00000461328 Q96M66 194 aa12.4□□□□□ -0.42
VARS-219ENST00000461328 TMEM59Q9BXS4 323 aa12.4□□□□□ -0.42
VARS-219ENST00000461328 RCC2Q9P258 522 aaKnown RBP12.4□□□□□ -0.42
VARS-219ENST00000461328 TRAPPC2LQ9UL33 140 aa12.4□□□□□ -0.42
VARS-219ENST00000461328 RRP15Q9Y3B9 282 aaKnown RBP12.4□□□□□ -0.42
VARS-219ENST00000461328 A0A087X0M5 115 aa12.39□□□□□ -0.43
VARS-219ENST00000461328 A0A1B0GX30 115 aa12.39□□□□□ -0.43
VARS-219ENST00000461328 H3BUI4 141 aa12.39□□□□□ -0.43
VARS-219ENST00000461328 IGLV1-47P01700 117 aa12.39□□□□□ -0.43
VARS-219ENST00000461328 CGB3P0DN86 165 aa12.39□□□□□ -0.43
VARS-219ENST00000461328 CGB7P0DN87 165 aa12.39□□□□□ -0.43
VARS-219ENST00000461328 BRS3P32247 399 aa12.39□□□□□ -0.43
VARS-219ENST00000461328 ARSJQ5FYB0 599 aaPredicted RBP12.39□□□□□ -0.43
VARS-219ENST00000461328 C1orf100Q5SVJ3 147 aa12.39□□□□□ -0.43
VARS-219ENST00000461328 OR10K2Q6IF99 312 aa12.39□□□□□ -0.43
VARS-219ENST00000461328 C11orf88Q6PI97 169 aa12.39□□□□□ -0.43
VARS-219ENST00000461328 ZNF497Q6ZNH5 498 aa12.39□□□□□ -0.43
VARS-219ENST00000461328 TMEM91Q6ZNR0 172 aa12.39□□□□□ -0.43
VARS-219ENST00000461328 DTX3Q8N9I9 347 aa12.39□□□□□ -0.43
VARS-219ENST00000461328 OR6M1Q8NGM8 313 aa12.39□□□□□ -0.43
VARS-219ENST00000461328 UBALD1Q8TB05 177 aa12.39□□□□□ -0.43
VARS-219ENST00000461328 CAPSLQ8WWF8 208 aa12.39□□□□□ -0.43
VARS-219ENST00000461328 TOMM40LQ969M1 308 aa12.39□□□□□ -0.43
VARS-219ENST00000461328 ARL11Q969Q4 196 aa12.39□□□□□ -0.43
VARS-219ENST00000461328 RPEQ96AT9 228 aa12.39□□□□□ -0.43
VARS-219ENST00000461328 MMP28Q9H239 520 aa12.39□□□□□ -0.43
VARS-219ENST00000461328 ACOT13Q9NPJ3 140 aa12.39□□□□□ -0.43
VARS-219ENST00000461328 KIAA2026Q5HYC2 2103 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 UBE2QL1A1L167 161 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 A6NDX4 124 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 BUB1B-PAK6H3BSN5 160 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 SDCBPO00560 298 aaPredicted RBP12.38□□□□□ -0.43
VARS-219ENST00000461328 PDCD6O75340 191 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 VSIG8P0DPA2 414 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 GZMHP20718 246 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 FUT3P21217 361 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 MNDAP41218 407 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 DYNLT3P51808 116 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 EFNB2P52799 333 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 FABP5Q01469 135 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 P2RY14Q15391 338 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 UTF1Q5T230 341 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 C6orf183Q5T699 404 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 TPTE2P1Q5T6R2 138 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 CCDC144NLQ6NUI1 221 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 PRR18Q8N4B5 295 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 OR10A7Q8NGE5 316 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 OR10X1Q8NGY0 326 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 OR4K15Q8NH41 348 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 KCNG3Q8TAE7 436 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 NEDD4LQ96PU5 975 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 MMP27Q9H306 513 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 KCNK15Q9H427 330 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 RAB9BQ9NP90 201 aa12.38□□□□□ -0.43
VARS-219ENST00000461328 AK6Q9Y3D8 172 aaKnown RBP12.38□□□□□ -0.43
VARS-219ENST00000461328 NPIPB11E5RHQ5 1161 aa12.37□□□□□ -0.43
VARS-219ENST00000461328 J3QR06 171 aa12.37□□□□□ -0.43
VARS-219ENST00000461328 SLC22A1O15245 554 aa12.37□□□□□ -0.43
VARS-219ENST00000461328 SPINT2O43291 252 aa12.37□□□□□ -0.43
VARS-219ENST00000461328 DENRO43583 198 aaKnown RBP12.37□□□□□ -0.43
VARS-219ENST00000461328 MRPS14O60783 128 aaKnown RBP12.37□□□□□ -0.43
VARS-219ENST00000461328 BPNT1O95861 308 aa12.37□□□□□ -0.43
VARS-219ENST00000461328 MT-ND4P03905 459 aa12.37□□□□□ -0.43
VARS-219ENST00000461328 PSMB9P28065 219 aa12.37□□□□□ -0.43
VARS-219ENST00000461328 RAB11BQ15907 218 aa12.37□□□□□ -0.43
VARS-219ENST00000461328 SYT6Q5T7P8 510 aaPredicted RBP12.37□□□□□ -0.43
VARS-219ENST00000461328 CCBE1Q6UXH8 406 aaPredicted RBP12.37□□□□□ -0.43
VARS-219ENST00000461328 Q6ZTK2 550 aa12.37□□□□□ -0.43
VARS-219ENST00000461328 LINC00574Q9H8X3 128 aa12.37□□□□□ -0.43
VARS-219ENST00000461328 PSG11Q9UQ72 335 aa12.37□□□□□ -0.43
VARS-219ENST00000461328 MEGF8Q7Z7M0 2845 aa12.36□□□□□ -0.43
VARS-219ENST00000461328 IGHV3-43A0A0B4J1X8 118 aa12.36□□□□□ -0.43
VARS-219ENST00000461328 A0A1W2PPE3 182 aa12.36□□□□□ -0.43
VARS-219ENST00000461328 OOSP1A8MZH6 123 aa12.36□□□□□ -0.43
VARS-219ENST00000461328 SLC17A2O00624 439 aa12.36□□□□□ -0.43
VARS-219ENST00000461328 ORC5O43913 435 aa12.36□□□□□ -0.43
VARS-219ENST00000461328 CA11O75493 328 aa12.36□□□□□ -0.43
VARS-219ENST00000461328 GLAP06280 429 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms