RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 LGALS12Q96DT0 336 aa9.65□□□□□ -0.86
GPNMB-204ENST00000459927 S1PR3Q99500 378 aa9.65□□□□□ -0.86
GPNMB-204ENST00000459927 GPER1Q99527 375 aa9.65□□□□□ -0.86
GPNMB-204ENST00000459927 DPCDQ9BVM2 203 aaPredicted RBP9.65□□□□□ -0.86
GPNMB-204ENST00000459927 IMPAD1Q9NX62 359 aa9.65□□□□□ -0.86
GPNMB-204ENST00000459927 ZNF581Q9P0T4 197 aa9.65□□□□□ -0.86
GPNMB-204ENST00000459927 AASSQ9UDR5 926 aa9.65□□□□□ -0.86
GPNMB-204ENST00000459927 ING4Q9UNL4 249 aa9.65□□□□□ -0.86
GPNMB-204ENST00000459927 SORL1Q92673 2214 aa9.64□□□□□ -0.87
GPNMB-204ENST00000459927 ZNF736B4DX44 427 aaPredicted RBP9.64□□□□□ -0.87
GPNMB-204ENST00000459927 SEC14L6B5MCN3 397 aa9.64□□□□□ -0.87
GPNMB-204ENST00000459927 GABRPO00591 440 aa9.64□□□□□ -0.87
GPNMB-204ENST00000459927 MAGEB3O15480 346 aa9.64□□□□□ -0.87
GPNMB-204ENST00000459927 MOSP00540 346 aa9.64□□□□□ -0.87
GPNMB-204ENST00000459927 IGHG4P01861 327 aa9.64□□□□□ -0.87
GPNMB-204ENST00000459927 RAB3AP20336 220 aa9.64□□□□□ -0.87
GPNMB-204ENST00000459927 VHLP40337 213 aa9.64□□□□□ -0.87
GPNMB-204ENST00000459927 F2RL1P55085 397 aa9.64□□□□□ -0.87
GPNMB-204ENST00000459927 FAM53AQ6NSI3 398 aaPredicted RBP9.64□□□□□ -0.87
GPNMB-204ENST00000459927 IZUMO1Q8IYV9 350 aa9.64□□□□□ -0.87
GPNMB-204ENST00000459927 SYS1Q8N2H4 156 aa9.64□□□□□ -0.87
GPNMB-204ENST00000459927 TMEM104Q8NE00 496 aa9.64□□□□□ -0.87
GPNMB-204ENST00000459927 OR51A2Q8NGJ7 313 aa9.64□□□□□ -0.87
GPNMB-204ENST00000459927 TNFAIP8L1Q8WVP5 186 aa9.64□□□□□ -0.87
GPNMB-204ENST00000459927 ARL11Q969Q4 196 aa9.64□□□□□ -0.87
GPNMB-204ENST00000459927 MRPL48Q96GC5 212 aaKnown RBP9.64□□□□□ -0.87
GPNMB-204ENST00000459927 MYCBPQ99417 103 aaPredicted RBP9.64□□□□□ -0.87
GPNMB-204ENST00000459927 RASL11BQ9BPW5 248 aa9.64□□□□□ -0.87
GPNMB-204ENST00000459927 PDCD1LG2Q9BQ51 273 aa9.64□□□□□ -0.87
GPNMB-204ENST00000459927 ALG8Q9BVK2 526 aa9.64□□□□□ -0.87
GPNMB-204ENST00000459927 IFT22Q9H7X7 185 aa9.64□□□□□ -0.87
GPNMB-204ENST00000459927 DHDHQ9UQ10 334 aa9.64□□□□□ -0.87
GPNMB-204ENST00000459927 ST3GAL6Q9Y274 331 aa9.64□□□□□ -0.87
GPNMB-204ENST00000459927 SIRT4Q9Y6E7 314 aaPredicted RBP9.64□□□□□ -0.87
GPNMB-204ENST00000459927 SAC3D1A6NKF1 404 aa9.63□□□□□ -0.87
GPNMB-204ENST00000459927 TMEM212A6NML5 194 aa9.63□□□□□ -0.87
GPNMB-204ENST00000459927 SNTNA6NMZ2 147 aa9.63□□□□□ -0.87
GPNMB-204ENST00000459927 ORC5O43913 435 aa9.63□□□□□ -0.87
GPNMB-204ENST00000459927 CDRT1O95170 752 aa9.63□□□□□ -0.87
GPNMB-204ENST00000459927 MT-ND4P03905 459 aa9.63□□□□□ -0.87
GPNMB-204ENST00000459927 CHATP28329 748 aa9.63□□□□□ -0.87
GPNMB-204ENST00000459927 ZNF134P52741 427 aa9.63□□□□□ -0.87
GPNMB-204ENST00000459927 CFHR3Q02985 330 aa9.63□□□□□ -0.87
GPNMB-204ENST00000459927 KIAA0141Q14154 515 aaPredicted RBP9.63□□□□□ -0.87
GPNMB-204ENST00000459927 ZIK1Q3SY52 487 aaPredicted RBP9.63□□□□□ -0.87
GPNMB-204ENST00000459927 ZNF260Q3ZCT1 412 aa9.63□□□□□ -0.87
GPNMB-204ENST00000459927 OR11H1Q8NG94 326 aa9.63□□□□□ -0.87
GPNMB-204ENST00000459927 OR8H1Q8NGG4 311 aa9.63□□□□□ -0.87
GPNMB-204ENST00000459927 CCDC107Q8WV48 283 aa9.63□□□□□ -0.87
GPNMB-204ENST00000459927 RTN4IP1Q8WWV3 396 aaPredicted RBP9.63□□□□□ -0.87
GPNMB-204ENST00000459927 RBMXL1Q96E39 390 aaKnown RBP9.63□□□□□ -0.87
GPNMB-204ENST00000459927 ERVK13-1Q9NX77 482 aa9.63□□□□□ -0.87
GPNMB-204ENST00000459927 HUWE1Q7Z6Z7 4374 aaKnown RBP9.63□□□□□ -0.87
GPNMB-204ENST00000459927 SDCBPO00560 298 aaPredicted RBP9.62□□□□□ -0.87
GPNMB-204ENST00000459927 RRP9O43818 475 aaKnown RBP9.62□□□□□ -0.87
GPNMB-204ENST00000459927 IGF1P05019 195 aa9.62□□□□□ -0.87
GPNMB-204ENST00000459927 ALPLP05186 524 aa9.62□□□□□ -0.87
GPNMB-204ENST00000459927 GABRB1P18505 474 aa9.62□□□□□ -0.87
GPNMB-204ENST00000459927 PSMB8P28062 276 aa9.62□□□□□ -0.87
GPNMB-204ENST00000459927 SOX6P35712 828 aa9.62□□□□□ -0.87
GPNMB-204ENST00000459927 GTF2A1P52655 376 aaPredicted RBP9.62□□□□□ -0.87
GPNMB-204ENST00000459927 GBX2P52951 348 aaPredicted RBP9.62□□□□□ -0.87
GPNMB-204ENST00000459927 MRPL28Q13084 256 aaKnown RBP9.62□□□□□ -0.87
GPNMB-204ENST00000459927 KLHL22Q53GT1 634 aa9.62□□□□□ -0.87
GPNMB-204ENST00000459927 NHLRC3Q5JS37 347 aa9.62□□□□□ -0.87
GPNMB-204ENST00000459927 C1orf146Q5VVC0 180 aa9.62□□□□□ -0.87
GPNMB-204ENST00000459927 LPCAT4Q643R3 524 aa9.62□□□□□ -0.87
GPNMB-204ENST00000459927 OR52N1Q8NH53 320 aa9.62□□□□□ -0.87
GPNMB-204ENST00000459927 RHOXF1Q8NHV9 184 aa9.62□□□□□ -0.87
GPNMB-204ENST00000459927 UBALD1Q8TB05 177 aa9.62□□□□□ -0.87
GPNMB-204ENST00000459927 CPNE2Q96FN4 548 aaPredicted RBP9.62□□□□□ -0.87
GPNMB-204ENST00000459927 HSPB9Q9BQS6 159 aa9.62□□□□□ -0.87
GPNMB-204ENST00000459927 CHCHD6Q9BRQ6 235 aa9.62□□□□□ -0.87
GPNMB-204ENST00000459927 METTL9Q9H1A3 318 aa9.62□□□□□ -0.87
GPNMB-204ENST00000459927 AMBNQ9NP70 447 aa9.62□□□□□ -0.87
GPNMB-204ENST00000459927 GFOD1Q9NXC2 390 aa9.62□□□□□ -0.87
GPNMB-204ENST00000459927 ZNF256Q9Y2P7 627 aaPredicted RBP9.62□□□□□ -0.87
GPNMB-204ENST00000459927 IGHV3-43A0A0B4J1X8 118 aa9.61□□□□□ -0.87
GPNMB-204ENST00000459927 TMEM30CPA0ZSE6 113 aa9.61□□□□□ -0.87
GPNMB-204ENST00000459927 GEMIN2O14893 280 aaKnown RBP9.61□□□□□ -0.87
GPNMB-204ENST00000459927 OR7C1O76099 320 aaPredicted RBP9.61□□□□□ -0.87
GPNMB-204ENST00000459927 FADS2O95864 444 aaKnown RBP9.61□□□□□ -0.87
GPNMB-204ENST00000459927 IGHV3-43DP0DP04 118 aa9.61□□□□□ -0.87
GPNMB-204ENST00000459927 PPIFP30405 207 aaKnown RBP9.61□□□□□ -0.87
GPNMB-204ENST00000459927 SOX2P48431 317 aa9.61□□□□□ -0.87
GPNMB-204ENST00000459927 INSL3P51460 131 aa9.61□□□□□ -0.87
GPNMB-204ENST00000459927 FHL3Q13643 280 aa9.61□□□□□ -0.87
GPNMB-204ENST00000459927 Q3ZCU0 254 aa9.61□□□□□ -0.87
GPNMB-204ENST00000459927 CT45A1Q5HYN5 189 aa9.61□□□□□ -0.87
GPNMB-204ENST00000459927 FAM71E2Q8N5Q1 922 aa9.61□□□□□ -0.87
GPNMB-204ENST00000459927 ZNF491Q8N8L2 437 aa9.61□□□□□ -0.87
GPNMB-204ENST00000459927 OR1N2Q8NGR9 330 aa9.61□□□□□ -0.87
GPNMB-204ENST00000459927 CT45A3Q8NHU0 189 aa9.61□□□□□ -0.87
GPNMB-204ENST00000459927 C4orf3Q8WVX3 66 aa9.61□□□□□ -0.87
GPNMB-204ENST00000459927 TSEN15Q8WW01 171 aaKnown RBP9.61□□□□□ -0.87
GPNMB-204ENST00000459927 KCTD7Q96MP8 289 aa9.61□□□□□ -0.87
GPNMB-204ENST00000459927 JAM3Q9BX67 310 aa9.61□□□□□ -0.87
GPNMB-204ENST00000459927 KLK15Q9H2R5 256 aa9.61□□□□□ -0.87
GPNMB-204ENST00000459927 IL36GQ9NZH8 169 aa9.61□□□□□ -0.87
GPNMB-204ENST00000459927 ZNF580Q9UK33 172 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms