RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 PINX1Q96BK5 328 aaKnown RBP7.56□□□□□ -1.2
HDAC3-202ENST00000459727 SIGLEC12Q96PQ1 595 aa7.56□□□□□ -1.2
HDAC3-202ENST00000459727 PSMG3Q9BT73 122 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-202ENST00000459727 OR51I2Q9H344 312 aa7.56□□□□□ -1.2
HDAC3-202ENST00000459727 CDH20Q9HBT6 801 aa7.56□□□□□ -1.2
HDAC3-202ENST00000459727 COA4Q9NYJ1 87 aa7.56□□□□□ -1.2
HDAC3-202ENST00000459727 MTCH1Q9NZJ7 389 aa7.56□□□□□ -1.2
HDAC3-202ENST00000459727 LAMP3Q9UQV4 416 aa7.56□□□□□ -1.2
HDAC3-202ENST00000459727 ZFHX2Q9C0A1 2572 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-202ENST00000459727 KNL1Q8NG31 2342 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 A0A096LPE4 126 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 TRGV5A0A0B4J1U4 118 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 A0A1W2PPZ6 126 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 IGSF23A1L1A6 192 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 C7orf77A4D0Y5 90 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 RBFOX3A6NFN3 312 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 COLCA2A8K830 154 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 FAM166BA8MTA8 275 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 B4DEV8 164 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 SH2D1BO14796 132 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 SOX15O60248 233 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 MT-CO3P00414 261 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 IFNA1P01562 189 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 IFNA17P01571 189 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 IGHV3-9P01782 118 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 CRYBA1P05813 215 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 S100A9P06702 114 aaKnown RBP7.55□□□□□ -1.2
HDAC3-202ENST00000459727 SCTP09683 121 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 SMIM6P0DI80 62 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 RAC2P15153 192 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 ZNF44P15621 663 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 ATP6V0CP27449 155 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 MAS1LP35410 378 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 SOX8P57073 446 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 POLR2GP62487 172 aaKnown RBP eCLIP7.55□□□□□ -1.2
HDAC3-202ENST00000459727 SERF2P84101 59 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 NHLH2Q02577 135 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 PNRC1Q12796 327 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-202ENST00000459727 DAZAP2Q15038 168 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-202ENST00000459727 HIKESHIQ53FT3 197 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 KHDC3LQ587J8 217 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 ZNF324BQ6AW86 544 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-202ENST00000459727 SLC25A24Q6NUK1 477 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 INO80CQ6PI98 192 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-202ENST00000459727 TRAT1Q6PIZ9 186 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 BRICD5Q6PL45 260 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 TMEM182Q6ZP80 229 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-202ENST00000459727 C1orf162Q8NEQ5 155 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-202ENST00000459727 OR5C1Q8NGR4 320 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 BCL2L2Q92843 193 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-202ENST00000459727 C14orf79Q96F83 325 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 USB1Q9BQ65 265 aaKnown RBP7.55□□□□□ -1.2
HDAC3-202ENST00000459727 ZNF552Q9H707 407 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-202ENST00000459727 WFDC1Q9HC57 220 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 SIRT7Q9NRC8 400 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 DLL3Q9NYJ7 618 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 KCNIP1Q9NZI2 227 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 TAAR3PQ9P1P4 343 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 ZDHHC8Q9ULC8 765 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 CHD6Q8TD26 2715 aa7.55□□□□□ -1.2
HDAC3-202ENST00000459727 TNRC6AQ8NDV7 1962 aaKnown RBP7.55□□□□□ -1.2
HDAC3-202ENST00000459727 ZNF292O60281 2723 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 MEX3AA1L020 520 aaKnown RBP7.54□□□□□ -1.2
HDAC3-202ENST00000459727 FAM24AA6NFZ4 105 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 ZNF891A8MT65 544 aaPredicted RBP7.54□□□□□ -1.2
HDAC3-202ENST00000459727 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.54□□□□□ -1.2
HDAC3-202ENST00000459727 MASP2O00187 686 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 HSD17B6O14756 317 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 SIGLEC5O15389 551 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 PDGFBP01127 241 aaPredicted RBP7.54□□□□□ -1.2
HDAC3-202ENST00000459727 HOXC12P31275 282 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 AKR1D1P51857 326 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 CATR1Q13166 79 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 HERPUD1Q15011 391 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 ZNF146Q15072 292 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 ZNF506Q5JVG8 444 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 PCSK4Q6UW60 755 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 ZNF497Q6ZNH5 498 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 Q6ZPA2 131 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 P4HA3Q7Z4N8 544 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 SLC35E3Q7Z769 313 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 C1QL4Q86Z23 238 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 CD300LFQ8TDQ1 290 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 SFT2D1Q8WV19 159 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 OBP2BQ9NPH6 170 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 CCL28Q9NRJ3 127 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 MBNL3Q9NUK0 354 aaKnown RBP7.54□□□□□ -1.2
HDAC3-202ENST00000459727 FOXJ2Q9P0K8 574 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 ZNF581Q9P0T4 197 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 TRAPPC2LQ9UL33 140 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 DMXL1Q9Y485 3027 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 CFAP47Q6ZTR5 3102 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 GON4LQ3T8J9 2241 aa7.54□□□□□ -1.2
HDAC3-202ENST00000459727 COL27A1Q8IZC6 1860 aaPredicted RBP7.53□□□□□ -1.2
HDAC3-202ENST00000459727 KMT2EQ8IZD2 1858 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 TRAV24A0A0B4J272 114 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 TMEM30CPA0ZSE6 113 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 ZNF98A6NK75 572 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 IQCF6A8MYZ5 107 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 TXNL1O43396 289 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms