RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 MMP23AO75900 390 aa13.1□□□□□ -0.31
CD28-203ENST00000458610 NDUFA7O95182 113 aa13.1□□□□□ -0.31
CD28-203ENST00000458610 OMGP23515 440 aa13.1□□□□□ -0.31
CD28-203ENST00000458610 NFYBP25208 207 aa13.1□□□□□ -0.31
CD28-203ENST00000458610 SSX2Q16385 188 aa13.1□□□□□ -0.31
CD28-203ENST00000458610 AWAT1Q58HT5 328 aa13.1□□□□□ -0.31
CD28-203ENST00000458610 C6orf183Q5T699 404 aa13.1□□□□□ -0.31
CD28-203ENST00000458610 BRICD5Q6PL45 260 aa13.1□□□□□ -0.31
CD28-203ENST00000458610 LHFPL4Q7Z7J7 247 aa13.1□□□□□ -0.31
CD28-203ENST00000458610 OR9G1Q8NH87 305 aa13.1□□□□□ -0.31
CD28-203ENST00000458610 AJUBAQ96IF1 538 aa13.1□□□□□ -0.31
CD28-203ENST00000458610 TM2D1Q9BX74 207 aa13.1□□□□□ -0.31
CD28-203ENST00000458610 KCNIP1Q9NZI2 227 aa13.1□□□□□ -0.31
CD28-203ENST00000458610 STUB1Q9UNE7 303 aa13.1□□□□□ -0.31
CD28-203ENST00000458610 SVEP1Q4LDE5 3571 aa13.1□□□□□ -0.31
CD28-203ENST00000458610 A0A087WXM4 84 aa13.09□□□□□ -0.31
CD28-203ENST00000458610 TMEM14DPA8MWL7 114 aa13.09□□□□□ -0.31
CD28-203ENST00000458610 TNFAIP8O95379 198 aa13.09□□□□□ -0.31
CD28-203ENST00000458610 FGF9P31371 208 aaPredicted RBP13.09□□□□□ -0.31
CD28-203ENST00000458610 TMEM30BQ3MIR4 351 aa13.09□□□□□ -0.31
CD28-203ENST00000458610 SYT6Q5T7P8 510 aaPredicted RBP13.09□□□□□ -0.31
CD28-203ENST00000458610 DHRS7BQ6IAN0 325 aaPredicted RBP13.09□□□□□ -0.31
CD28-203ENST00000458610 OR52M1Q8NGK5 317 aa13.09□□□□□ -0.31
CD28-203ENST00000458610 C17orf50Q8WW18 174 aa13.09□□□□□ -0.31
CD28-203ENST00000458610 ARL11Q969Q4 196 aa13.09□□□□□ -0.31
CD28-203ENST00000458610 FAM3DQ96BQ1 224 aa13.09□□□□□ -0.31
CD28-203ENST00000458610 KIRREL1Q96J84 757 aa13.09□□□□□ -0.31
CD28-203ENST00000458610 ZNF581Q9P0T4 197 aa13.09□□□□□ -0.31
CD28-203ENST00000458610 STEAP1Q9UHE8 339 aa13.09□□□□□ -0.31
CD28-203ENST00000458610 PITPNC1Q9UKF7 332 aa13.09□□□□□ -0.31
CD28-203ENST00000458610 AMMECR1Q9Y4X0 333 aaPredicted RBP13.09□□□□□ -0.31
CD28-203ENST00000458610 MMP24Q9Y5R2 645 aa13.09□□□□□ -0.31
CD28-203ENST00000458610 OOSP1A8MZH6 123 aa13.08□□□□□ -0.32
CD28-203ENST00000458610 SPINT2O43291 252 aa13.08□□□□□ -0.32
CD28-203ENST00000458610 RAB3BP20337 219 aa13.08□□□□□ -0.32
CD28-203ENST00000458610 BRS3P32247 399 aa13.08□□□□□ -0.32
CD28-203ENST00000458610 DYNLT3P51808 116 aa13.08□□□□□ -0.32
CD28-203ENST00000458610 RAG2P55895 527 aa13.08□□□□□ -0.32
CD28-203ENST00000458610 QRFPP83859 136 aa13.08□□□□□ -0.32
CD28-203ENST00000458610 P2RY14Q15391 338 aa13.08□□□□□ -0.32
CD28-203ENST00000458610 C2orf76Q3KRA6 126 aa13.08□□□□□ -0.32
CD28-203ENST00000458610 NKAPLQ5M9Q1 402 aa13.08□□□□□ -0.32
CD28-203ENST00000458610 C22orf42Q6IC83 251 aa13.08□□□□□ -0.32
CD28-203ENST00000458610 OR10K2Q6IF99 312 aa13.08□□□□□ -0.32
CD28-203ENST00000458610 ZNF554Q86TJ5 538 aa13.08□□□□□ -0.32
CD28-203ENST00000458610 TPRA1Q86W33 373 aa13.08□□□□□ -0.32
CD28-203ENST00000458610 RFESDQ8TAC1 157 aa13.08□□□□□ -0.32
CD28-203ENST00000458610 CCDC107Q8WV48 283 aa13.08□□□□□ -0.32
CD28-203ENST00000458610 RIMS4Q9H426 269 aaPredicted RBP13.08□□□□□ -0.32
CD28-203ENST00000458610 PLEKHJ1Q9NW61 149 aa13.08□□□□□ -0.32
CD28-203ENST00000458610 C1RLQ9NZP8 487 aa13.08□□□□□ -0.32
CD28-203ENST00000458610 FBLN5Q9UBX5 448 aa13.08□□□□□ -0.32
CD28-203ENST00000458610 UBE2QL1A1L167 161 aa13.07□□□□□ -0.32
CD28-203ENST00000458610 HAX1O00165 279 aa13.07□□□□□ -0.32
CD28-203ENST00000458610 IGLV1-47P01700 117 aa13.07□□□□□ -0.32
CD28-203ENST00000458610 BLVRBP30043 206 aaPredicted RBP13.07□□□□□ -0.32
CD28-203ENST00000458610 GDNFP39905 211 aa13.07□□□□□ -0.32
CD28-203ENST00000458610 HLA-DRB5Q30154 266 aa13.07□□□□□ -0.32
CD28-203ENST00000458610 Q3ZCU0 254 aa13.07□□□□□ -0.32
CD28-203ENST00000458610 SIGIRRQ6IA17 410 aa13.07□□□□□ -0.32
CD28-203ENST00000458610 CCDC144NLQ6NUI1 221 aa13.07□□□□□ -0.32
CD28-203ENST00000458610 GAPTQ8N292 157 aa13.07□□□□□ -0.32
CD28-203ENST00000458610 TSPAN14Q8NG11 270 aa13.07□□□□□ -0.32
CD28-203ENST00000458610 OR51D1Q8NGF3 324 aa13.07□□□□□ -0.32
CD28-203ENST00000458610 OR4P4Q8NGL7 312 aa13.07□□□□□ -0.32
CD28-203ENST00000458610 GFI1Q99684 422 aa13.07□□□□□ -0.32
CD28-203ENST00000458610 ZNF286AQ9HBT8 521 aa13.07□□□□□ -0.32
CD28-203ENST00000458610 TXNL4BQ9NX01 149 aaKnown RBP13.07□□□□□ -0.32
CD28-203ENST00000458610 RAB22AQ9UL26 194 aa13.07□□□□□ -0.32
CD28-203ENST00000458610 HILPDAQ9Y5L2 63 aa13.07□□□□□ -0.32
CD28-203ENST00000458610 DSCAML1Q8TD84 2053 aa13.06□□□□□ -0.32
CD28-203ENST00000458610 TRAV39A0A0B4J263 110 aa13.06□□□□□ -0.32
CD28-203ENST00000458610 IFITM5A6NNB3 132 aa13.06□□□□□ -0.32
CD28-203ENST00000458610 BUB1B-PAK6H3BSN5 160 aa13.06□□□□□ -0.32
CD28-203ENST00000458610 J3QR06 171 aa13.06□□□□□ -0.32
CD28-203ENST00000458610 SDCBPO00560 298 aaPredicted RBP13.06□□□□□ -0.32
CD28-203ENST00000458610 CHATP28329 748 aa13.06□□□□□ -0.32
CD28-203ENST00000458610 SSTR5P35346 364 aa13.06□□□□□ -0.32
CD28-203ENST00000458610 MNDAP41218 407 aa13.06□□□□□ -0.32
CD28-203ENST00000458610 UNC119Q13432 240 aa13.06□□□□□ -0.32
CD28-203ENST00000458610 NEDD8Q15843 81 aa13.06□□□□□ -0.32
CD28-203ENST00000458610 LY6EQ16553 131 aa13.06□□□□□ -0.32
CD28-203ENST00000458610 LTC4SQ16873 150 aa13.06□□□□□ -0.32
CD28-203ENST00000458610 FAM89BQ8N5H3 189 aa13.06□□□□□ -0.32
CD28-203ENST00000458610 OR56B1Q8NGI3 324 aa13.06□□□□□ -0.32
CD28-203ENST00000458610 OR4K15Q8NH41 348 aa13.06□□□□□ -0.32
CD28-203ENST00000458610 KCTD7Q96MP8 289 aa13.06□□□□□ -0.32
CD28-203ENST00000458610 ZNF747Q9BV97 191 aa13.06□□□□□ -0.32
CD28-203ENST00000458610 MMP28Q9H239 520 aa13.06□□□□□ -0.32
CD28-203ENST00000458610 CLPSL1A2RUU4 121 aa13.05□□□□□ -0.32
CD28-203ENST00000458610 C15orf65H3BRN8 121 aa13.05□□□□□ -0.32
CD28-203ENST00000458610 F2RL2O00254 374 aa13.05□□□□□ -0.32
CD28-203ENST00000458610 CFPP27918 469 aa13.05□□□□□ -0.32
CD28-203ENST00000458610 TIMM50Q3ZCQ8 353 aa13.05□□□□□ -0.32
CD28-203ENST00000458610 HES5Q5TA89 166 aa13.05□□□□□ -0.32
CD28-203ENST00000458610 SHISA2Q6UWI4 295 aa13.05□□□□□ -0.32
CD28-203ENST00000458610 C8orf31Q8N9H6 132 aa13.05□□□□□ -0.32
CD28-203ENST00000458610 RPEQ96AT9 228 aa13.05□□□□□ -0.32
CD28-203ENST00000458610 FAAP24Q9BTP7 215 aa13.05□□□□□ -0.32
CD28-203ENST00000458610 LPAR5Q9H1C0 372 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms