RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 LIAT1Q6ZQX7 453 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 TSEN54Q7Z6J9 526 aaKnown RBP8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 SLC25A28Q96A46 364 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 A0A1W2PP11 408 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 PDCD6O75340 191 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 WISP3O95389 354 aaPredicted RBP8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 HPP00738 406 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 OR5AL1P0C617 328 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 HOXB1P14653 301 aaPredicted RBP8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 FKBP2P26885 142 aaKnown RBP8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 SUB1P53999 127 aaKnown RBP eCLIP8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 C21orf58P58505 322 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 FA2HQ7L5A8 372 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 OR5AU1Q8NGC0 362 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 OR10G8Q8NGN5 311 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 ALX4Q9H161 411 aaPredicted RBP8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 PARP11Q9NR21 331 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 ST6GALNAC2Q9UJ37 374 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 YTHDF2Q9Y5A9 579 aaKnown RBP8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 TRAV39A0A0B4J263 110 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 SHISA3A0PJX4 238 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 NKX2-6A6NCS4 301 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 M0R1X1 148 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 HRKO00198 91 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 DHRS3O75911 302 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 CTSDP07339 412 aaPredicted RBP8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 DDTP30046 118 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 ERHP84090 104 aaKnown RBP8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 ZNF774Q6NX45 483 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 MRPL54Q6P161 138 aaKnown RBP8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 OR1F12Q8NHA8 337 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 RPS4Y2Q8TD47 263 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 MCHR2Q969V1 340 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 FOXB1Q99853 325 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 RCC2Q9P258 522 aaKnown RBP8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 NAT8Q9UHE5 227 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 KCNK7Q9Y2U2 307 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 RAXQ9Y2V3 346 aa8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 MRPS18BQ9Y676 258 aaKnown RBP8.56□□□□□ -1.04
MSC-AS1-201ENST00000457356 CRYM-AS1A6NIL9 109 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 SYNGR2O43760 224 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 PAGE4O60829 102 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 CRYAAP02489 173 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 PGA4P0DJD7 388 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 PGA5P0DJD9 388 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 CD59P13987 128 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 KLK2P20151 261 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 VDAC1P21796 283 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 DCAF10Q5QP82 559 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 MOB1BQ7L9L4 216 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 PRSS33Q8NF86 280 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 BARX1Q9HBU1 254 aaPredicted RBP8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 TECRQ9NZ01 308 aaKnown RBP8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 COL4A6Q14031 1691 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 SEC11BP0C7V7 166 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 CCL2P13500 99 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 SELLP14151 372 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 ZNF32P17041 273 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 ZP1P60852 638 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 GNB1P62873 340 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 EWSR1Q01844 656 aaKnown RBP eCLIP8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 SURF2Q15527 256 aaPredicted RBP8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 FAM162BQ5T6X4 162 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 NOXO1Q8NFA2 376 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 PRSS3P2Q8NHM4 247 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 NT5CQ8TCD5 201 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 GPR27Q9NS67 375 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 SF3B6Q9Y3B4 125 aaKnown RBP8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 HDGFL3Q9Y3E1 203 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 OTOGLQ3ZCN5 2332 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 FCGR3BO75015 233 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 RPLP1P05386 114 aaKnown RBP8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 IL24Q13007 206 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 ZNF345Q14585 488 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 OR8B12Q8NGG6 310 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 SPACA9Q96E40 222 aaPredicted RBP8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 WFIKKN1Q96NZ8 548 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 HDHD3Q9BSH5 251 aaPredicted RBP8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 DDA1Q9BW61 102 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 PECRQ9BY49 303 aa8.55□□□□□ -1.04
MSC-AS1-201ENST00000457356 ABCA4P78363 2273 aa8.54□□□□□ -1.04
MSC-AS1-201ENST00000457356 C11orf94C9JXX5 98 aa8.54□□□□□ -1.04
MSC-AS1-201ENST00000457356 H0YL77 283 aa8.54□□□□□ -1.04
MSC-AS1-201ENST00000457356 NGFP01138 241 aa8.54□□□□□ -1.04
MSC-AS1-201ENST00000457356 GNG4P50150 75 aa8.54□□□□□ -1.04
MSC-AS1-201ENST00000457356 SLC35B1P78383 322 aa8.54□□□□□ -1.04
MSC-AS1-201ENST00000457356 TBC1D26Q86UD7 250 aa8.54□□□□□ -1.04
MSC-AS1-201ENST00000457356 ZNF501Q96CX3 271 aaPredicted RBP8.54□□□□□ -1.04
MSC-AS1-201ENST00000457356 OR1A1Q9P1Q5 309 aa8.54□□□□□ -1.04
MSC-AS1-201ENST00000457356 IER3P46695 156 aa8.54□□□□□ -1.04
MSC-AS1-201ENST00000457356 CSN1S1P47710 185 aa8.54□□□□□ -1.04
MSC-AS1-201ENST00000457356 CEBPEQ15744 281 aa8.54□□□□□ -1.04
MSC-AS1-201ENST00000457356 HLA-DRB5Q30154 266 aa8.54□□□□□ -1.04
MSC-AS1-201ENST00000457356 OR5D13Q8NGL4 314 aa8.54□□□□□ -1.04
MSC-AS1-201ENST00000457356 OR1L4Q8NGR5 311 aa8.54□□□□□ -1.04
MSC-AS1-201ENST00000457356 EDARADDQ8WWZ3 215 aa8.54□□□□□ -1.04
MSC-AS1-201ENST00000457356 REG4Q9BYZ8 158 aa8.54□□□□□ -1.04
MSC-AS1-201ENST00000457356 CCL28Q9NRJ3 127 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms