RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 RAB9BQ9NP90 201 aa12.45□□□□□ -0.42
LIMS1-210ENST00000449684 ETAA1Q9NY74 926 aa12.45□□□□□ -0.42
LIMS1-210ENST00000449684 TRAPPC2LQ9UL33 140 aa12.45□□□□□ -0.42
LIMS1-210ENST00000449684 PSG11Q9UQ72 335 aa12.45□□□□□ -0.42
LIMS1-210ENST00000449684 PEX16Q9Y5Y5 336 aa12.45□□□□□ -0.42
LIMS1-210ENST00000449684 NPIPB11E5RHQ5 1161 aa12.44□□□□□ -0.42
LIMS1-210ENST00000449684 SDCBPO00560 298 aaPredicted RBP12.44□□□□□ -0.42
LIMS1-210ENST00000449684 HSMCR30P0CW71 290 aa12.44□□□□□ -0.42
LIMS1-210ENST00000449684 MGMTP16455 207 aa12.44□□□□□ -0.42
LIMS1-210ENST00000449684 DEFA6Q01524 100 aa12.44□□□□□ -0.42
LIMS1-210ENST00000449684 GPR50Q13585 617 aa12.44□□□□□ -0.42
LIMS1-210ENST00000449684 HES1Q14469 280 aa12.44□□□□□ -0.42
LIMS1-210ENST00000449684 NSUN5P1Q3KNT7 163 aa12.44□□□□□ -0.42
LIMS1-210ENST00000449684 RBM48Q5RL73 367 aaKnown RBP12.44□□□□□ -0.42
LIMS1-210ENST00000449684 GLT8D1Q68CQ7 371 aa12.44□□□□□ -0.42
LIMS1-210ENST00000449684 RAB12Q6IQ22 244 aa12.44□□□□□ -0.42
LIMS1-210ENST00000449684 Q8N2B8 174 aa12.44□□□□□ -0.42
LIMS1-210ENST00000449684 NRG4Q8WWG1 115 aa12.44□□□□□ -0.42
LIMS1-210ENST00000449684 UFD1Q92890 307 aa12.44□□□□□ -0.42
LIMS1-210ENST00000449684 CST11Q9H112 138 aa12.44□□□□□ -0.42
LIMS1-210ENST00000449684 LINC00574Q9H8X3 128 aa12.44□□□□□ -0.42
LIMS1-210ENST00000449684 SERTAD4Q9NUC0 356 aa12.44□□□□□ -0.42
LIMS1-210ENST00000449684 LY6LH3BQJ8 138 aa12.43□□□□□ -0.42
LIMS1-210ENST00000449684 PIN1P1O15428 100 aa12.43□□□□□ -0.42
LIMS1-210ENST00000449684 OR2F2O95006 317 aa12.43□□□□□ -0.42
LIMS1-210ENST00000449684 ABCA11PQ4W5N1 156 aa12.43□□□□□ -0.42
LIMS1-210ENST00000449684 C9orf152Q5JTZ5 239 aa12.43□□□□□ -0.42
LIMS1-210ENST00000449684 CEACAM19Q7Z692 300 aa12.43□□□□□ -0.42
LIMS1-210ENST00000449684 FAM46BQ96A09 425 aa12.43□□□□□ -0.42
LIMS1-210ENST00000449684 RBM14Q96PK6 669 aaKnown RBP12.43□□□□□ -0.42
LIMS1-210ENST00000449684 GHRLQ9UBU3 117 aa12.43□□□□□ -0.42
LIMS1-210ENST00000449684 MEGF8Q7Z7M0 2845 aa12.43□□□□□ -0.42
LIMS1-210ENST00000449684 CMYA5Q8N3K9 4069 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 A0A1W2PPE3 182 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 FAM90A10PA6NDY2 464 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 FAM90A18PA6NE21 464 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 FAM90A16PA6NEW6 464 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 FAM90A20PA6NIJ5 464 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 FAM90A7PA6NKC0 464 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 FAM90A12PA8MX19 464 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 FAM90A5PA8MXJ8 464 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 FAM90A23PA8MXZ1 464 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 SPINT2O43291 252 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 RGS10O43665 173 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 ORC5O43913 435 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 MT-ND4P03905 459 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 FAM90A15PP0C7V4 464 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 FAM90A13PP0C7W8 464 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 FAM90A14PP0C7W9 464 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 FAM90A24PP0C7X0 464 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 UBBP0CG47 229 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 MYF6P23409 242 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 IL3RAP26951 378 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 HSPA13P48723 471 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 RAB7AP51149 207 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 EMX1Q04741 257 aaPredicted RBP12.42□□□□□ -0.42
LIMS1-210ENST00000449684 INSL4Q14641 139 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 HSD17B12Q53GQ0 312 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 UTF1Q5T230 341 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 C6orf183Q5T699 404 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 SYT6Q5T7P8 510 aaPredicted RBP12.42□□□□□ -0.42
LIMS1-210ENST00000449684 LIPKQ5VXJ0 399 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 HIST2H2BDQ6DRA6 164 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 ZNF497Q6ZNH5 498 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 CENPVQ7Z7K6 275 aaPredicted RBP12.42□□□□□ -0.42
LIMS1-210ENST00000449684 LYG1Q8N1E2 194 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 PRR18Q8N4B5 295 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 UBALD1Q8TB05 177 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 CFHR4Q92496 578 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 VWFP04275 2813 aa12.42□□□□□ -0.42
LIMS1-210ENST00000449684 IGHV3-43A0A0B4J1X8 118 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 M0QZK8 103 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 MPIG6BO95866 241 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 LPLP06858 475 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 SNRNP70P08621 437 aaKnown RBP12.41□□□□□ -0.42
LIMS1-210ENST00000449684 IGHV3-43DP0DP04 118 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 CD28P10747 220 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 FUT3P21217 361 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 SLC35A2P78381 396 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 TMEM95Q3KNT9 176 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 NKAPLQ5M9Q1 402 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 FAM27D1Q5T7N8 215 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 TRAT1Q6PIZ9 186 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 UNQ9370/PRO34162Q6UXP9 181 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 Q6ZS46 218 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 OR8H3Q8N146 312 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 DRAM1Q8N682 238 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 TMEM104Q8NE00 496 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 OR52M1Q8NGK5 317 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 OR4K15Q8NH41 348 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 OR56B4Q8NH76 319 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 PHYHIPQ92561 330 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 SGCDQ92629 289 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 TMEM203Q969S6 136 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 NEDD4LQ96PU5 975 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 ANKRD60Q9BZ19 345 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 KCNIP1Q9NZI2 227 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 RCC2Q9P258 522 aaKnown RBP12.41□□□□□ -0.42
LIMS1-210ENST00000449684 GNG12Q9UBI6 72 aa12.41□□□□□ -0.42
LIMS1-210ENST00000449684 UBE2QL1A1L167 161 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms