RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 FAM90A12PA8MX19 464 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 FAM90A5PA8MXJ8 464 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 FAM90A23PA8MXZ1 464 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 NPIPB11E5RHQ5 1161 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 SLC17A2O00624 439 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 CHST1O43916 411 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 PDCD6O75340 191 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 NDUFA7O95182 113 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 BPNT1O95861 308 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 IGLV1-47P01700 117 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 MT-ND4P03905 459 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 FAM90A15PP0C7V4 464 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 FAM90A13PP0C7W8 464 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 FAM90A14PP0C7W9 464 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 FAM90A24PP0C7X0 464 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 FUT3P21217 361 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 HTR1DP28221 377 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 GNG10P50151 68 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 RPS27AP62979 156 aaKnown RBP11.97□□□□□ -0.49
HDAC4-204ENST00000446876 RBM39Q14498 530 aaKnown RBP11.97□□□□□ -0.49
HDAC4-204ENST00000446876 RAB11BQ15907 218 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 HES5Q5TA89 166 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 MINOS1Q5TGZ0 78 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 C22orf42Q6IC83 251 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 CD200R1LQ6Q8B3 271 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 Q6ZSV7 163 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 OR4F5Q8NH21 305 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 MINOS1-NBL1R4GNA1 71 aa11.97□□□□□ -0.49
HDAC4-204ENST00000446876 A0A087X0M5 115 aa11.96□□□□□ -0.49
HDAC4-204ENST00000446876 A0A1B0GX30 115 aa11.96□□□□□ -0.49
HDAC4-204ENST00000446876 A0A1W2PPE3 182 aa11.96□□□□□ -0.49
HDAC4-204ENST00000446876 SMIM30A4D0T7 59 aa11.96□□□□□ -0.49
HDAC4-204ENST00000446876 C15orf65H3BRN8 121 aa11.96□□□□□ -0.49
HDAC4-204ENST00000446876 TOR1AO14656 332 aa11.96□□□□□ -0.49
HDAC4-204ENST00000446876 CHATP28329 748 aa11.96□□□□□ -0.49
HDAC4-204ENST00000446876 RPL15P61313 204 aaKnown RBP11.96□□□□□ -0.49
HDAC4-204ENST00000446876 PLA2G7Q13093 441 aa11.96□□□□□ -0.49
HDAC4-204ENST00000446876 NEDD8Q15843 81 aa11.96□□□□□ -0.49
HDAC4-204ENST00000446876 AANATQ16613 207 aa11.96□□□□□ -0.49
HDAC4-204ENST00000446876 HLA-DRB5Q30154 266 aa11.96□□□□□ -0.49
HDAC4-204ENST00000446876 KCTD21Q4G0X4 260 aa11.96□□□□□ -0.49
HDAC4-204ENST00000446876 SYT6Q5T7P8 510 aaPredicted RBP11.96□□□□□ -0.49
HDAC4-204ENST00000446876 C5orf24Q7Z6I8 188 aa11.96□□□□□ -0.49
HDAC4-204ENST00000446876 TMEM219Q86XT9 240 aa11.96□□□□□ -0.49
HDAC4-204ENST00000446876 OR51D1Q8NGF3 324 aa11.96□□□□□ -0.49
HDAC4-204ENST00000446876 KCNG3Q8TAE7 436 aa11.96□□□□□ -0.49
HDAC4-204ENST00000446876 ZNF596Q8TC21 504 aa11.96□□□□□ -0.49
HDAC4-204ENST00000446876 FCGR1BQ92637 280 aa11.96□□□□□ -0.49
HDAC4-204ENST00000446876 ARL11Q969Q4 196 aa11.96□□□□□ -0.49
HDAC4-204ENST00000446876 SULT4A1Q9BR01 284 aa11.96□□□□□ -0.49
HDAC4-204ENST00000446876 LINC00574Q9H8X3 128 aa11.96□□□□□ -0.49
HDAC4-204ENST00000446876 ABCB10Q9NRK6 738 aa11.96□□□□□ -0.49
HDAC4-204ENST00000446876 V9GY05 133 aa11.96□□□□□ -0.49
HDAC4-204ENST00000446876 IGHV3-43A0A0B4J1X8 118 aa11.95□□□□□ -0.5
HDAC4-204ENST00000446876 VGLL3A8MV65 326 aa11.95□□□□□ -0.5
HDAC4-204ENST00000446876 C12orf77C9JDV5 145 aa11.95□□□□□ -0.5
HDAC4-204ENST00000446876 IGHV3-43DP0DP04 118 aa11.95□□□□□ -0.5
HDAC4-204ENST00000446876 ARSBP15848 533 aa11.95□□□□□ -0.5
HDAC4-204ENST00000446876 RCC1P18754 421 aaPredicted RBP11.95□□□□□ -0.5
HDAC4-204ENST00000446876 MYL9P24844 172 aa11.95□□□□□ -0.5
HDAC4-204ENST00000446876 SRSF4Q08170 494 aaKnown RBP11.95□□□□□ -0.5
HDAC4-204ENST00000446876 CCBE1Q6UXH8 406 aaPredicted RBP11.95□□□□□ -0.5
HDAC4-204ENST00000446876 C6orf201Q7Z4U5 140 aa11.95□□□□□ -0.5
HDAC4-204ENST00000446876 OR9G1Q8NH87 305 aa11.95□□□□□ -0.5
HDAC4-204ENST00000446876 LINC01006Q8NI28 216 aa11.95□□□□□ -0.5
HDAC4-204ENST00000446876 MRPL30Q8TCC3 161 aaKnown RBP11.95□□□□□ -0.5
HDAC4-204ENST00000446876 ZNF747Q9BV97 191 aa11.95□□□□□ -0.5
HDAC4-204ENST00000446876 TM2D1Q9BX74 207 aa11.95□□□□□ -0.5
HDAC4-204ENST00000446876 LPAR5Q9H1C0 372 aa11.95□□□□□ -0.5
HDAC4-204ENST00000446876 BEX1Q9HBH7 125 aa11.95□□□□□ -0.5
HDAC4-204ENST00000446876 DPM3Q9P2X0 92 aa11.95□□□□□ -0.5
HDAC4-204ENST00000446876 TRAPPC2LQ9UL33 140 aa11.95□□□□□ -0.5
HDAC4-204ENST00000446876 PSG11Q9UQ72 335 aa11.95□□□□□ -0.5
HDAC4-204ENST00000446876 TCF19Q9Y242 345 aa11.95□□□□□ -0.5
HDAC4-204ENST00000446876 MMP24Q9Y5R2 645 aa11.95□□□□□ -0.5
HDAC4-204ENST00000446876 A0A0B4J203 849 aa11.94□□□□□ -0.5
HDAC4-204ENST00000446876 TRAV1-2A0A0B4J238 106 aa11.94□□□□□ -0.5
HDAC4-204ENST00000446876 CLPSL1A2RUU4 121 aa11.94□□□□□ -0.5
HDAC4-204ENST00000446876 BUB1B-PAK6H3BSN5 160 aa11.94□□□□□ -0.5
HDAC4-204ENST00000446876 J3QR06 171 aa11.94□□□□□ -0.5
HDAC4-204ENST00000446876 F2RL2O00254 374 aa11.94□□□□□ -0.5
HDAC4-204ENST00000446876 CD24P25063 80 aa11.94□□□□□ -0.5
HDAC4-204ENST00000446876 PRRX1P54821 245 aa11.94□□□□□ -0.5
HDAC4-204ENST00000446876 FBLN7Q53RD9 439 aa11.94□□□□□ -0.5
HDAC4-204ENST00000446876 TPTE2P1Q5T6R2 138 aa11.94□□□□□ -0.5
HDAC4-204ENST00000446876 OLFML2AQ68BL7 652 aa11.94□□□□□ -0.5
HDAC4-204ENST00000446876 OR2W3Q7Z3T1 314 aa11.94□□□□□ -0.5
HDAC4-204ENST00000446876 NR2C2APQ86WQ0 139 aa11.94□□□□□ -0.5
HDAC4-204ENST00000446876 GAPTQ8N292 157 aa11.94□□□□□ -0.5
HDAC4-204ENST00000446876 PRR18Q8N4B5 295 aa11.94□□□□□ -0.5
HDAC4-204ENST00000446876 OR1L1Q8NH94 360 aa11.94□□□□□ -0.5
HDAC4-204ENST00000446876 FAM3DQ96BQ1 224 aa11.94□□□□□ -0.5
HDAC4-204ENST00000446876 NEDD4LQ96PU5 975 aa11.94□□□□□ -0.5
HDAC4-204ENST00000446876 FAAP24Q9BTP7 215 aa11.94□□□□□ -0.5
HDAC4-204ENST00000446876 MMP28Q9H239 520 aa11.94□□□□□ -0.5
HDAC4-204ENST00000446876 OR51E2Q9H255 320 aa11.94□□□□□ -0.5
HDAC4-204ENST00000446876 TXNL4BQ9NX01 149 aaKnown RBP11.94□□□□□ -0.5
HDAC4-204ENST00000446876 STUB1Q9UNE7 303 aa11.94□□□□□ -0.5
HDAC4-204ENST00000446876 SIGLEC9Q9Y336 463 aa11.94□□□□□ -0.5
HDAC4-204ENST00000446876 TMEM272A0A1B0GTI8 110 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms