RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 ZNF565Q8N9K5 539 aa11.3□□□□□ -0.6
TREX1-202ENST00000444177 OR4P4Q8NGL7 312 aa11.3□□□□□ -0.6
TREX1-202ENST00000444177 ZNF596Q8TC21 504 aa11.3□□□□□ -0.6
TREX1-202ENST00000444177 SELENOIQ9C0D9 397 aa11.3□□□□□ -0.6
TREX1-202ENST00000444177 RAB18Q9NP72 206 aa11.3□□□□□ -0.6
TREX1-202ENST00000444177 GHRLQ9UBU3 117 aa11.3□□□□□ -0.6
TREX1-202ENST00000444177 VGLL3A8MV65 326 aa11.29□□□□□ -0.6
TREX1-202ENST00000444177 TOR1AO14656 332 aa11.29□□□□□ -0.6
TREX1-202ENST00000444177 IL1AP01583 271 aa11.29□□□□□ -0.6
TREX1-202ENST00000444177 MGMTP16455 207 aa11.29□□□□□ -0.6
TREX1-202ENST00000444177 CALRP27797 417 aaKnown RBP11.29□□□□□ -0.6
TREX1-202ENST00000444177 SSTR5P35346 364 aa11.29□□□□□ -0.6
TREX1-202ENST00000444177 RAB13P51153 203 aa11.29□□□□□ -0.6
TREX1-202ENST00000444177 EFNB2P52799 333 aa11.29□□□□□ -0.6
TREX1-202ENST00000444177 TIMM50Q3ZCQ8 353 aa11.29□□□□□ -0.6
TREX1-202ENST00000444177 C1orf100Q5SVJ3 147 aa11.29□□□□□ -0.6
TREX1-202ENST00000444177 LIAT1Q6ZQX7 453 aa11.29□□□□□ -0.6
TREX1-202ENST00000444177 OR4C13Q8NGP0 309 aa11.29□□□□□ -0.6
TREX1-202ENST00000444177 FAM110DQ8TAY7 271 aaPredicted RBP11.29□□□□□ -0.6
TREX1-202ENST00000444177 FAM46BQ96A09 425 aa11.29□□□□□ -0.6
TREX1-202ENST00000444177 MRPS24Q96EL2 167 aaKnown RBP11.29□□□□□ -0.6
TREX1-202ENST00000444177 KIRREL1Q96J84 757 aa11.29□□□□□ -0.6
TREX1-202ENST00000444177 MRPS26Q9BYN8 205 aaKnown RBP11.29□□□□□ -0.6
TREX1-202ENST00000444177 NCOR1P1Q9H4R4 102 aa11.29□□□□□ -0.6
TREX1-202ENST00000444177 SPACA1Q9HBV2 294 aa11.29□□□□□ -0.6
TREX1-202ENST00000444177 IDI2-AS1Q9NZ38 188 aa11.29□□□□□ -0.6
TREX1-202ENST00000444177 SSR3Q9UNL2 185 aa11.29□□□□□ -0.6
TREX1-202ENST00000444177 TCF19Q9Y242 345 aa11.29□□□□□ -0.6
TREX1-202ENST00000444177 AIPO00170 330 aa11.28□□□□□ -0.6
TREX1-202ENST00000444177 PDCD5O14737 125 aa11.28□□□□□ -0.6
TREX1-202ENST00000444177 CHST1O43916 411 aa11.28□□□□□ -0.6
TREX1-202ENST00000444177 UBBP0CG47 229 aa11.28□□□□□ -0.6
TREX1-202ENST00000444177 SMIM18P0DKX4 95 aa11.28□□□□□ -0.6
TREX1-202ENST00000444177 CD36P16671 472 aa11.28□□□□□ -0.6
TREX1-202ENST00000444177 MYL9P24844 172 aa11.28□□□□□ -0.6
TREX1-202ENST00000444177 CD34P28906 385 aa11.28□□□□□ -0.6
TREX1-202ENST00000444177 GNG10P50151 68 aa11.28□□□□□ -0.6
TREX1-202ENST00000444177 PAX5Q02548 391 aa11.28□□□□□ -0.6
TREX1-202ENST00000444177 RBM39Q14498 530 aaKnown RBP11.28□□□□□ -0.6
TREX1-202ENST00000444177 HERPUD1Q15011 391 aa11.28□□□□□ -0.6
TREX1-202ENST00000444177 C2orf68Q2NKX9 166 aa11.28□□□□□ -0.6
TREX1-202ENST00000444177 C11orf88Q6PI97 169 aa11.28□□□□□ -0.6
TREX1-202ENST00000444177 Q6ZTK2 550 aa11.28□□□□□ -0.6
TREX1-202ENST00000444177 TMEM219Q86XT9 240 aa11.28□□□□□ -0.6
TREX1-202ENST00000444177 TMEM104Q8NE00 496 aa11.28□□□□□ -0.6
TREX1-202ENST00000444177 CST11Q9H112 138 aa11.28□□□□□ -0.6
TREX1-202ENST00000444177 TXNL4BQ9NX01 149 aaKnown RBP11.28□□□□□ -0.6
TREX1-202ENST00000444177 RCC2Q9P258 522 aaKnown RBP11.28□□□□□ -0.6
TREX1-202ENST00000444177 A0A087X0M5 115 aa11.27□□□□□ -0.61
TREX1-202ENST00000444177 A0A1B0GX30 115 aa11.27□□□□□ -0.61
TREX1-202ENST00000444177 MCRIP1C9JLW8 97 aa11.27□□□□□ -0.61
TREX1-202ENST00000444177 MPIG6BO95866 241 aa11.27□□□□□ -0.61
TREX1-202ENST00000444177 IGHV3-7P01780 117 aa11.27□□□□□ -0.61
TREX1-202ENST00000444177 CSF1P09603 554 aa11.27□□□□□ -0.61
TREX1-202ENST00000444177 ARHGDIBP52566 201 aa11.27□□□□□ -0.61
TREX1-202ENST00000444177 PRRX1P54821 245 aa11.27□□□□□ -0.61
TREX1-202ENST00000444177 HLA-DRB5Q30154 266 aa11.27□□□□□ -0.61
TREX1-202ENST00000444177 UTF1Q5T230 341 aa11.27□□□□□ -0.61
TREX1-202ENST00000444177 RAB12Q6IQ22 244 aa11.27□□□□□ -0.61
TREX1-202ENST00000444177 TPRA1Q86W33 373 aa11.27□□□□□ -0.61
TREX1-202ENST00000444177 OR6M1Q8NGM8 313 aa11.27□□□□□ -0.61
TREX1-202ENST00000444177 OR2T6Q8NHC8 308 aa11.27□□□□□ -0.61
TREX1-202ENST00000444177 RFESDQ8TAC1 157 aa11.27□□□□□ -0.61
TREX1-202ENST00000444177 CCDC107Q8WV48 283 aa11.27□□□□□ -0.61
TREX1-202ENST00000444177 LEAP2Q969E1 77 aa11.27□□□□□ -0.61
TREX1-202ENST00000444177 YIPF6Q96EC8 236 aa11.27□□□□□ -0.61
TREX1-202ENST00000444177 Q96M66 194 aa11.27□□□□□ -0.61
TREX1-202ENST00000444177 NPFFR1Q9GZQ6 430 aa11.27□□□□□ -0.61
TREX1-202ENST00000444177 RANBP3Q9H6Z4 567 aaPredicted RBP11.27□□□□□ -0.61
TREX1-202ENST00000444177 ETAA1Q9NY74 926 aa11.27□□□□□ -0.61
TREX1-202ENST00000444177 DPM3Q9P2X0 92 aa11.27□□□□□ -0.61
TREX1-202ENST00000444177 PITPNC1Q9UKF7 332 aa11.27□□□□□ -0.61
TREX1-202ENST00000444177 A6NDX4 124 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 FAM90A10PA6NDY2 464 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 FAM90A18PA6NE21 464 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 FAM90A16PA6NEW6 464 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 FAM90A20PA6NIJ5 464 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 FAM90A7PA6NKC0 464 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 FAM90A22PA8MWA6 464 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 FAM90A12PA8MX19 464 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 FAM90A5PA8MXJ8 464 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 FAM90A23PA8MXZ1 464 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 LEUTXA8MZ59 168 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 SLC17A2O00624 439 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 SLC22A1O15245 554 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 IGLV1-47P01700 117 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 FAM90A15PP0C7V4 464 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 FAM90A13PP0C7W8 464 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 FAM90A14PP0C7W9 464 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 FAM90A24PP0C7X0 464 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 CGB3P0DN86 165 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 CGB7P0DN87 165 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 HTR2CP28335 458 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 CEACAM3P40198 252 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 DYNLT3P51808 116 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 NKAPLQ5M9Q1 402 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 TPTE2P1Q5T6R2 138 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 C22orf42Q6IC83 251 aa11.26□□□□□ -0.61
TREX1-202ENST00000444177 CCBE1Q6UXH8 406 aaPredicted RBP11.26□□□□□ -0.61
TREX1-202ENST00000444177 ZNF497Q6ZNH5 498 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms