RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 DICER1Q9UPY3 1922 aaKnown RBP19.46■□□□□ 0.71
CTDSPL-206ENST00000443503 NPIPB13A6NJU9 1138 aa19.46■□□□□ 0.71
CTDSPL-206ENST00000443503 NPIPB4C9JG80 1138 aa19.46■□□□□ 0.71
CTDSPL-206ENST00000443503 G3V3Q6 166 aa19.46■□□□□ 0.71
CTDSPL-206ENST00000443503 CEACAM21Q3KPI0 293 aa19.46■□□□□ 0.71
CTDSPL-206ENST00000443503 ZNF362Q5T0B9 420 aaPredicted RBP19.46■□□□□ 0.71
CTDSPL-206ENST00000443503 STPG1Q5TH74 334 aa19.46■□□□□ 0.71
CTDSPL-206ENST00000443503 R3HDM4Q96D70 268 aa19.46■□□□□ 0.71
CTDSPL-206ENST00000443503 CTDSP1Q9GZU7 261 aa19.46■□□□□ 0.71
CTDSPL-206ENST00000443503 NPDC1Q9NQX5 325 aaPredicted RBP19.46■□□□□ 0.71
CTDSPL-206ENST00000443503 PRSS50Q9UI38 385 aa19.46■□□□□ 0.71
CTDSPL-206ENST00000443503 WDR81Q562E7 1941 aa19.46■□□□□ 0.71
CTDSPL-206ENST00000443503 IGKV1D-43A0A0B4J1Z2 117 aa19.46■□□□□ 0.71
CTDSPL-206ENST00000443503 A0A0G2JK05 382 aa19.46■□□□□ 0.71
CTDSPL-206ENST00000443503 IFITM2Q01629 132 aa19.46■□□□□ 0.71
CTDSPL-206ENST00000443503 FAM214BQ7L5A3 538 aa19.46■□□□□ 0.71
CTDSPL-206ENST00000443503 OR4A4PQ8NGN8 299 aa19.46■□□□□ 0.71
CTDSPL-206ENST00000443503 LIPGQ9Y5X9 500 aa19.46■□□□□ 0.71
CTDSPL-206ENST00000443503 ADRA2AP08913 450 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 CSN1S1P47710 185 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 TPRX1Q8N7U7 411 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 MS4A7Q9GZW8 240 aaPredicted RBP19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 TGOLN2O43493 480 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 FTH1P19P0C7X4 201 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 ZNF345Q14585 488 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 UBE2V2Q15819 145 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 ARTNQ5T4W7 220 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 LINC00114Q6XXX2 140 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 OR10G4Q8NGN3 311 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 OR10G9Q8NGN4 311 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 OR10G7Q8NGN6 311 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 CA5BP1Q8WTZ4 195 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 AQP3Q92482 292 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 TMEM147Q9BVK8 224 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 CLEC3BP05452 202 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 PPP1R32Q7Z5V6 425 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 TMEM230Q96A57 120 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 RNF122Q9H9V4 155 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 CFDP00746 253 aaPredicted RBP19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 Q5BKY6 102 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 PHYHD1Q5SRE7 291 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 TMEM65Q6PI78 240 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 OR4S2Q8NH73 311 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 RPEQ96AT9 228 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 C12orf57Q99622 126 aa19.45■□□□□ 0.7
CTDSPL-206ENST00000443503 COX7A1P24310 79 aa19.44■□□□□ 0.7
CTDSPL-206ENST00000443503 C20orf202A1L168 122 aa19.44■□□□□ 0.7
CTDSPL-206ENST00000443503 OPRK1P41145 380 aa19.44■□□□□ 0.7
CTDSPL-206ENST00000443503 CDC34P49427 236 aaPredicted RBP19.44■□□□□ 0.7
CTDSPL-206ENST00000443503 GINS3Q9BRX5 216 aa19.44■□□□□ 0.7
CTDSPL-206ENST00000443503 LOC101059948A0A1B0GTJ6 334 aa19.44■□□□□ 0.7
CTDSPL-206ENST00000443503 FGF2P09038 288 aa19.44■□□□□ 0.7
CTDSPL-206ENST00000443503 PSG2P11465 335 aa19.44■□□□□ 0.7
CTDSPL-206ENST00000443503 NTF3P20783 257 aa19.44■□□□□ 0.7
CTDSPL-206ENST00000443503 FGF12P61328 243 aa19.44■□□□□ 0.7
CTDSPL-206ENST00000443503 PLAC9Q5JTB6 97 aa19.44■□□□□ 0.7
CTDSPL-206ENST00000443503 LOXL4Q96JB6 756 aa19.44■□□□□ 0.7
CTDSPL-206ENST00000443503 SLC35D1Q9NTN3 355 aa19.44■□□□□ 0.7
CTDSPL-206ENST00000443503 RCC2Q9P258 522 aaKnown RBP19.44■□□□□ 0.7
CTDSPL-206ENST00000443503 RBFOX3A6NFN3 312 aa19.44■□□□□ 0.7
CTDSPL-206ENST00000443503 CLDN34H7C241 214 aa19.44■□□□□ 0.7
CTDSPL-206ENST00000443503 S100A8P05109 93 aa19.44■□□□□ 0.7
CTDSPL-206ENST00000443503 NMBP08949 121 aa19.44■□□□□ 0.7
CTDSPL-206ENST00000443503 H2BFSP57053 126 aa19.44■□□□□ 0.7
CTDSPL-206ENST00000443503 ATP1A1-AS1Q5TC04 95 aa19.44■□□□□ 0.7
CTDSPL-206ENST00000443503 SLC23A3Q6PIS1 610 aa19.44■□□□□ 0.7
CTDSPL-206ENST00000443503 DTD1Q8TEA8 209 aa19.44■□□□□ 0.7
CTDSPL-206ENST00000443503 H0Y8G0 127 aa19.43■□□□□ 0.7
CTDSPL-206ENST00000443503 ZNF737O75373 536 aa19.43■□□□□ 0.7
CTDSPL-206ENST00000443503 LY86O95711 162 aa19.43■□□□□ 0.7
CTDSPL-206ENST00000443503 RCC1P18754 421 aaPredicted RBP19.43■□□□□ 0.7
CTDSPL-206ENST00000443503 RSPO4Q2I0M5 234 aaPredicted RBP19.43■□□□□ 0.7
CTDSPL-206ENST00000443503 ATP5SQ99766 215 aa19.43■□□□□ 0.7
CTDSPL-206ENST00000443503 OR5AC2Q9NZP5 309 aa19.43■□□□□ 0.7
CTDSPL-206ENST00000443503 ONECUT1Q9UBC0 465 aa19.43■□□□□ 0.7
CTDSPL-206ENST00000443503 PPIHO43447 177 aaKnown RBP19.43■□□□□ 0.7
CTDSPL-206ENST00000443503 IGHMP01871 453 aa19.43■□□□□ 0.7
CTDSPL-206ENST00000443503 CD200P41217 278 aa19.43■□□□□ 0.7
CTDSPL-206ENST00000443503 CHCHD2Q9Y6H1 151 aaPredicted RBP19.43■□□□□ 0.7
CTDSPL-206ENST00000443503 F2RP25116 425 aa19.43■□□□□ 0.7
CTDSPL-206ENST00000443503 CBLN2Q8IUK8 224 aa19.43■□□□□ 0.7
CTDSPL-206ENST00000443503 POMT1Q9Y6A1 747 aa19.43■□□□□ 0.7
CTDSPL-206ENST00000443503 TMEM50BP56557 158 aa19.42■□□□□ 0.7
CTDSPL-206ENST00000443503 ZDHHC11Q9H8X9 412 aa19.42■□□□□ 0.7
CTDSPL-206ENST00000443503 PI4KAP42356 2102 aa19.42■□□□□ 0.7
CTDSPL-206ENST00000443503 TRAV38-1A0A0B4J264 116 aa19.42■□□□□ 0.7
CTDSPL-206ENST00000443503 SCTP09683 121 aa19.42■□□□□ 0.7
CTDSPL-206ENST00000443503 RFPL3SP0C7P2 107 aa19.42■□□□□ 0.7
CTDSPL-206ENST00000443503 PPP1CCP36873 323 aaKnown RBP19.42■□□□□ 0.7
CTDSPL-206ENST00000443503 SAP30LQ9HAJ7 183 aa19.42■□□□□ 0.7
CTDSPL-206ENST00000443503 SYNGR1O43759 233 aa19.42■□□□□ 0.7
CTDSPL-206ENST00000443503 DAOP14920 347 aa19.42■□□□□ 0.7
CTDSPL-206ENST00000443503 TMEM241Q24JQ0 296 aa19.42■□□□□ 0.7
CTDSPL-206ENST00000443503 NR2C2APQ86WQ0 139 aa19.42■□□□□ 0.7
CTDSPL-206ENST00000443503 RNF7Q9UBF6 113 aa19.42■□□□□ 0.7
CTDSPL-206ENST00000443503 SP9P0CG40 484 aa19.42■□□□□ 0.7
CTDSPL-206ENST00000443503 RPS11P62280 158 aaKnown RBP eCLIP19.42■□□□□ 0.7
CTDSPL-206ENST00000443503 ATP6V1FQ16864 119 aa19.42■□□□□ 0.7
CTDSPL-206ENST00000443503 TUSC1Q2TAM9 212 aa19.42■□□□□ 0.7
CTDSPL-206ENST00000443503 RD3LP0DJH9 198 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms