RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 RAB22AQ9UL26 194 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 MINOS1-NBL1R4GNA1 71 aa9.61□□□□□ -0.87
HSPG2-206ENST00000439717 LOC100506127A0A0U1RQW1 187 aa9.6□□□□□ -0.87
HSPG2-206ENST00000439717 OMGP23515 440 aa9.6□□□□□ -0.87
HSPG2-206ENST00000439717 DYNC1I2Q13409 638 aaKnown RBP9.6□□□□□ -0.87
HSPG2-206ENST00000439717 NKAPLQ5M9Q1 402 aa9.6□□□□□ -0.87
HSPG2-206ENST00000439717 C6orf183Q5T699 404 aa9.6□□□□□ -0.87
HSPG2-206ENST00000439717 C16orf87Q6PH81 154 aa9.6□□□□□ -0.87
HSPG2-206ENST00000439717 TRAT1Q6PIZ9 186 aa9.6□□□□□ -0.87
HSPG2-206ENST00000439717 SLC16A12Q6ZSM3 486 aa9.6□□□□□ -0.87
HSPG2-206ENST00000439717 ABHD12Q8N2K0 398 aa9.6□□□□□ -0.87
HSPG2-206ENST00000439717 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.6□□□□□ -0.87
HSPG2-206ENST00000439717 ZNF596Q8TC21 504 aa9.6□□□□□ -0.87
HSPG2-206ENST00000439717 PTX4Q96A99 478 aa9.6□□□□□ -0.87
HSPG2-206ENST00000439717 MALSU1Q96EH3 234 aa9.6□□□□□ -0.87
HSPG2-206ENST00000439717 AJUBAQ96IF1 538 aa9.6□□□□□ -0.87
HSPG2-206ENST00000439717 KIRREL1Q96J84 757 aa9.6□□□□□ -0.87
HSPG2-206ENST00000439717 DUX5Q96PT3 197 aa9.6□□□□□ -0.87
HSPG2-206ENST00000439717 NICN1Q9BSH3 213 aa9.6□□□□□ -0.87
HSPG2-206ENST00000439717 IDI2-AS1Q9NZ38 188 aa9.6□□□□□ -0.87
HSPG2-206ENST00000439717 HSF4Q9ULV5 492 aa9.6□□□□□ -0.87
HSPG2-206ENST00000439717 A0A0A6YYD4 124 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 TMEM272A0A1B0GTI8 110 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 UBE2QL1A1L167 161 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 BTBD17A6NE02 478 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 IGHV4-59P01825 116 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 RAB6AP20340 208 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 BLVRBP30043 206 aaPredicted RBP9.59□□□□□ -0.87
HSPG2-206ENST00000439717 SDC2P34741 201 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 SSTR5P35346 364 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 GDNFP39905 211 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 PRRX1P54821 245 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 RPL15P61313 204 aaKnown RBP9.59□□□□□ -0.87
HSPG2-206ENST00000439717 TMEM30BQ3MIR4 351 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 ZNF554Q86TJ5 538 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 NR2C2APQ86WQ0 139 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 OR56B1Q8NGI3 324 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 OR52M1Q8NGK5 317 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 OR5R1Q8NH85 324 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 SPATA3Q8NHX4 192 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 CCDC107Q8WV48 283 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 C17orf50Q8WW18 174 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 ARL11Q969Q4 196 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 CREB3L1Q96BA8 519 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 SULT4A1Q9BR01 284 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 CENPOQ9BU64 300 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 LIN7BQ9HAP6 207 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 MBNL3Q9NUK0 354 aaKnown RBP9.59□□□□□ -0.87
HSPG2-206ENST00000439717 PLEKHJ1Q9NW61 149 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 TRAPPC2LQ9UL33 140 aa9.59□□□□□ -0.87
HSPG2-206ENST00000439717 TRAV39A0A0B4J263 110 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 FOXI3A8MTJ6 420 aaPredicted RBP9.58□□□□□ -0.88
HSPG2-206ENST00000439717 C15orf65H3BRN8 121 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 TOR1AO14656 332 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 SOCS1O15524 211 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 SPINT2O43291 252 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 AIREO43918 545 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 TMEM127O75204 238 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 IGLV1-47P01700 117 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 SMIM18P0DKX4 95 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 NFYBP25208 207 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 HTR1DP28221 377 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 ACTG1P63261 375 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 LRRC75BQ2VPJ9 315 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 SFXN4Q6P4A7 337 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 BAIAP2L2Q6UXY1 529 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 C6orf201Q7Z4U5 140 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 LHFPL4Q7Z7J7 247 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 OR4P4Q8NGL7 312 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 OR4K15Q8NH41 348 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 OR9G1Q8NH87 305 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 RFESDQ8TAC1 157 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 MRPL30Q8TCC3 161 aaKnown RBP9.58□□□□□ -0.88
HSPG2-206ENST00000439717 DYRK2Q92630 601 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 FAAP24Q9BTP7 215 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 MRPS26Q9BYN8 205 aaKnown RBP9.58□□□□□ -0.88
HSPG2-206ENST00000439717 CHIAQ9BZP6 476 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 RIMS4Q9H426 269 aaPredicted RBP9.58□□□□□ -0.88
HSPG2-206ENST00000439717 ZNF286AQ9HBT8 521 aa9.58□□□□□ -0.88
HSPG2-206ENST00000439717 TMEM89A2RUT3 159 aa9.57□□□□□ -0.88
HSPG2-206ENST00000439717 METTL21EPA6NDL7 271 aa9.57□□□□□ -0.88
HSPG2-206ENST00000439717 POM121CA8CG34 1229 aa9.57□□□□□ -0.88
HSPG2-206ENST00000439717 VGLL3A8MV65 326 aa9.57□□□□□ -0.88
HSPG2-206ENST00000439717 LEUTXA8MZ59 168 aa9.57□□□□□ -0.88
HSPG2-206ENST00000439717 C12orf77C9JDV5 145 aa9.57□□□□□ -0.88
HSPG2-206ENST00000439717 F2RL2O00254 374 aa9.57□□□□□ -0.88
HSPG2-206ENST00000439717 HKR1P10072 659 aa9.57□□□□□ -0.88
HSPG2-206ENST00000439717 SLC2A2P11168 524 aaPredicted RBP9.57□□□□□ -0.88
HSPG2-206ENST00000439717 CEACAM3P40198 252 aa9.57□□□□□ -0.88
HSPG2-206ENST00000439717 VEGFCP49767 419 aa9.57□□□□□ -0.88
HSPG2-206ENST00000439717 TMEM50BP56557 158 aa9.57□□□□□ -0.88
HSPG2-206ENST00000439717 SCAND1P57086 179 aa9.57□□□□□ -0.88
HSPG2-206ENST00000439717 Q3ZCU0 254 aa9.57□□□□□ -0.88
HSPG2-206ENST00000439717 LDLRAD2Q5SZI1 272 aa9.57□□□□□ -0.88
HSPG2-206ENST00000439717 Q6ZTK2 550 aa9.57□□□□□ -0.88
HSPG2-206ENST00000439717 CROCCP3Q8IVE0 287 aa9.57□□□□□ -0.88
HSPG2-206ENST00000439717 OR13F1Q8NGS4 319 aa9.57□□□□□ -0.88
HSPG2-206ENST00000439717 NDNFQ8TB73 568 aa9.57□□□□□ -0.88
HSPG2-206ENST00000439717 SSX3Q99909 188 aa9.57□□□□□ -0.88
HSPG2-206ENST00000439717 RNF167Q9H6Y7 350 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms