RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 KCTD16Q68DU8 428 aa1.76□□□□□ -2.13
VPS41-207ENST00000439468 CLEC19AQ6UXS0 136 aa1.76□□□□□ -2.13
VPS41-207ENST00000439468 FAM19A1Q7Z5A9 133 aa1.76□□□□□ -2.13
VPS41-207ENST00000439468 NELFCDQ8IXH7 590 aa1.76□□□□□ -2.13
VPS41-207ENST00000439468 CA13Q8N1Q1 262 aa1.76□□□□□ -2.13
VPS41-207ENST00000439468 GAPTQ8N292 157 aa1.76□□□□□ -2.13
VPS41-207ENST00000439468 SYS1Q8N2H4 156 aa1.76□□□□□ -2.13
VPS41-207ENST00000439468 RNF10Q8N5U6 811 aaKnown RBP1.76□□□□□ -2.13
VPS41-207ENST00000439468 ZFP62Q8NB50 900 aaPredicted RBP1.76□□□□□ -2.13
VPS41-207ENST00000439468 ZNF680Q8NEM1 530 aa1.76□□□□□ -2.13
VPS41-207ENST00000439468 C1orf64Q8NEQ6 169 aa1.76□□□□□ -2.13
VPS41-207ENST00000439468 OR2K2Q8NGT1 345 aa1.76□□□□□ -2.13
VPS41-207ENST00000439468 OR6N2Q8NGY6 317 aa1.76□□□□□ -2.13
VPS41-207ENST00000439468 CLHC1Q8NHS4 586 aa1.76□□□□□ -2.13
VPS41-207ENST00000439468 ORAOV1Q8WV07 137 aa1.76□□□□□ -2.13
VPS41-207ENST00000439468 C22orf15Q8WYQ4 148 aa1.76□□□□□ -2.13
VPS41-207ENST00000439468 ZNF396Q96N95 335 aaPredicted RBP1.76□□□□□ -2.13
VPS41-207ENST00000439468 SIKE1Q9BRV8 207 aa1.76□□□□□ -2.13
VPS41-207ENST00000439468 FRMD8P1Q9BZ68 369 aaPredicted RBP1.76□□□□□ -2.13
VPS41-207ENST00000439468 ACOT13Q9NPJ3 140 aa1.76□□□□□ -2.13
VPS41-207ENST00000439468 C12orf4Q9NQ89 552 aa1.76□□□□□ -2.13
VPS41-207ENST00000439468 CLEC2DQ9UHP7 191 aa1.76□□□□□ -2.13
VPS41-207ENST00000439468 ANXA10Q9UJ72 324 aa1.76□□□□□ -2.13
VPS41-207ENST00000439468 SLC7A11Q9UPY5 501 aa1.76□□□□□ -2.13
VPS41-207ENST00000439468 TSC2P49815 1807 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 FBN1P35555 2871 aaKnown RBP1.75□□□□□ -2.13
VPS41-207ENST00000439468 A0A1W2PNN7 141 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 GSTTP1A0A1W2PQM5 241 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 IZUMO1RA6ND01 250 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 NDUFS8O00217 210 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 UPK1AO00322 258 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 CXorf1O96002 111 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 IGHV1-46P01743 117 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 RLN2P04090 185 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 IGKV5-2P06315 115 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 OR4Q2P0C623 313 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 IL9P15248 144 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 TAC1P20366 129 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 TEAD1P28347 426 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 MPIP34949 423 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 ARR3P36575 388 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 ACOT2P49753 483 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 ERFP50548 548 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 FMODQ06828 376 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 C2orf80Q0P641 193 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 GUSBP1Q15486 140 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 LINC00303Q3SY05 128 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 SYT6Q5T7P8 510 aaPredicted RBP1.75□□□□□ -2.13
VPS41-207ENST00000439468 ZDHHC22Q8N966 263 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 SLC26A10Q8NG04 563 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 CDKL2Q92772 493 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 SHCBP1LQ9BZQ2 653 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 SYT4Q9H2B2 425 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 C11orf49Q9H6J7 331 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 OR2S2Q9NQN1 319 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 PARP11Q9NR21 331 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 RBM12B-AS1Q9P1G2 102 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 AP3M1Q9Y2T2 418 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 INSIG2Q9Y5U4 225 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 PTPRFP10586 1907 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 SHANK1Q9Y566 2161 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 SIP14410 1827 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 BOD1L1Q8NFC6 3051 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 SPTA1P02549 2419 aa1.75□□□□□ -2.13
VPS41-207ENST00000439468 NAV3Q8IVL0 2385 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 NUP155O75694 1391 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 LOC389332A0A1B0GUA5 103 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 MGAT4DA6NG13 374 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 ISLRO14498 428 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 OR2A4O95047 310 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 VAPBO95292 243 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 FSTL3O95633 263 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 CCDC172P0C7W6 258 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 ZNF35P13682 527 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 LCN1P31025 176 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 GPR4P46093 362 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 OR12D2P58182 307 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 MEF2CQ06413 473 aaPredicted RBP1.74□□□□□ -2.13
VPS41-207ENST00000439468 STX4Q12846 297 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 IGFBP7Q16270 282 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 CEACAM16Q2WEN9 425 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 ACTBL2Q562R1 376 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 ACTL10Q5JWF8 245 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 LIN9Q5TKA1 542 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 FAHD1Q6P587 224 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 BRD3OSQ6XYD6 125 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 FAM231DQ6ZW35 169 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 ADM2Q7Z4H4 148 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 ZNF555Q8NEP9 628 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 FMC1Q96HJ9 113 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 OR2A7Q96R45 310 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 C1orf50Q9BV19 199 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 PLA2G12AQ9BZM1 189 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 ZNF436Q9C0F3 470 aaPredicted RBP1.74□□□□□ -2.13
VPS41-207ENST00000439468 SRRQ9GZT4 340 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 FAM60AQ9NP50 221 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 ABCB9Q9NP78 766 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 ZNF302Q9NR11 478 aa1.74□□□□□ -2.13
VPS41-207ENST00000439468 RBM22Q9NW64 420 aaKnown RBP eCLIP1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms