RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 TNFSF13O75888 250 aa13.74□□□□□ -0.21
DHFR-201ENST00000439211 RIPPLY3P57055 190 aa13.74□□□□□ -0.21
DHFR-201ENST00000439211 EWSR1Q01844 656 aaKnown RBP eCLIP13.74□□□□□ -0.21
DHFR-201ENST00000439211 LYZL2Q7Z4W2 148 aa13.74□□□□□ -0.21
DHFR-201ENST00000439211 OR13G1Q8NGZ3 307 aa13.74□□□□□ -0.21
DHFR-201ENST00000439211 MRGPRDQ8TDS7 321 aa13.74□□□□□ -0.21
DHFR-201ENST00000439211 ZNF586Q9NXT0 402 aa13.74□□□□□ -0.21
DHFR-201ENST00000439211 LTBP2Q14767 1821 aa13.74□□□□□ -0.21
DHFR-201ENST00000439211 K7N7A8 449 aa13.74□□□□□ -0.21
DHFR-201ENST00000439211 ZNF205O95201 554 aa13.74□□□□□ -0.21
DHFR-201ENST00000439211 CLPSP04118 112 aa13.74□□□□□ -0.21
DHFR-201ENST00000439211 DTYMKP23919 212 aa13.74□□□□□ -0.21
DHFR-201ENST00000439211 GNRHRP30968 328 aa13.74□□□□□ -0.21
DHFR-201ENST00000439211 SUPT4H1P63272 117 aaKnown RBP13.74□□□□□ -0.21
DHFR-201ENST00000439211 FBLN7Q53RD9 439 aa13.74□□□□□ -0.21
DHFR-201ENST00000439211 RTN4RL2Q86UN3 420 aa13.74□□□□□ -0.21
DHFR-201ENST00000439211 MYPOPQ86VE0 399 aaPredicted RBP13.74□□□□□ -0.21
DHFR-201ENST00000439211 BATF2Q8N1L9 274 aa13.74□□□□□ -0.21
DHFR-201ENST00000439211 YPEL4Q96NS1 127 aa13.74□□□□□ -0.21
DHFR-201ENST00000439211 IGHV1OR15-9A0A0B4J2B8 117 aa13.74□□□□□ -0.21
DHFR-201ENST00000439211 SCRG1O75711 98 aa13.74□□□□□ -0.21
DHFR-201ENST00000439211 NKX2-1P43699 371 aaPredicted RBP13.74□□□□□ -0.21
DHFR-201ENST00000439211 RAB35Q15286 201 aa13.74□□□□□ -0.21
DHFR-201ENST00000439211 ASPHD2Q6ICH7 369 aa13.74□□□□□ -0.21
DHFR-201ENST00000439211 OR10G3Q8NGC4 313 aa13.74□□□□□ -0.21
DHFR-201ENST00000439211 RNF133Q8WVZ7 376 aa13.74□□□□□ -0.21
DHFR-201ENST00000439211 BCL2L2Q92843 193 aaPredicted RBP13.74□□□□□ -0.21
DHFR-201ENST00000439211 RARRES3Q9UL19 164 aa13.74□□□□□ -0.21
DHFR-201ENST00000439211 PRUNE2Q8WUY3 3088 aa13.74□□□□□ -0.21
DHFR-201ENST00000439211 IGHV3-15A0A0B4J1V0 119 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 A0A1W2PQD3 144 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 GRIFINA4D1Z8 144 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 CD55P08174 381 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 PTGER4P35408 488 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 GNB2P62879 340 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 DMWDQ09019 674 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 UNC119Q13432 240 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 FAM78BQ5VT40 261 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 RTN4IP1Q8WWV3 396 aaPredicted RBP13.73□□□□□ -0.21
DHFR-201ENST00000439211 LAMTOR2Q9Y2Q5 125 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 LYL1P12980 280 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 PAX1P15863 534 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 FAHP16930 419 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 FSTP19883 344 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 OPRM1P35372 400 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 HERV-K104P61576 105 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 ZNF506Q5JVG8 444 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 OR8G2PQ6IF36 304 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 PTCRAQ6ISU1 281 aaPredicted RBP13.73□□□□□ -0.21
DHFR-201ENST00000439211 TMEM256Q8N2U0 113 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 ST6GALNAC3Q8NDV1 305 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 OR5AU1Q8NGC0 362 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 RCC1LQ96I51 464 aaKnown RBP13.73□□□□□ -0.21
DHFR-201ENST00000439211 GSX1Q9H4S2 264 aaPredicted RBP13.73□□□□□ -0.21
DHFR-201ENST00000439211 ALKBH4Q9NXW9 302 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 C2orf16Q68DN1 1984 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 ZNF814B7Z6K7 855 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 ZFAND5O76080 213 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 RAC2P15153 192 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 HIST1H1DP16402 221 aaKnown RBP13.73□□□□□ -0.21
DHFR-201ENST00000439211 MFAP5Q13361 173 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 SPATA45Q537H7 98 aa13.73□□□□□ -0.21
DHFR-201ENST00000439211 RTBDNQ9BSG5 229 aaPredicted RBP13.73□□□□□ -0.21
DHFR-201ENST00000439211 CHTOPQ9Y3Y2 248 aaKnown RBP13.73□□□□□ -0.21
DHFR-201ENST00000439211 H3BP45 60 aa13.72□□□□□ -0.21
DHFR-201ENST00000439211 SMPD2O60906 423 aa13.72□□□□□ -0.21
DHFR-201ENST00000439211 FOXK1P85037 733 aa13.72□□□□□ -0.21
DHFR-201ENST00000439211 LYG1Q8N1E2 194 aa13.72□□□□□ -0.21
DHFR-201ENST00000439211 OR8B12Q8NGG6 310 aa13.72□□□□□ -0.21
DHFR-201ENST00000439211 MOB3AQ96BX8 217 aa13.72□□□□□ -0.21
DHFR-201ENST00000439211 WIPI2Q9Y4P8 454 aa13.72□□□□□ -0.21
DHFR-201ENST00000439211 ZNF728P0DKX0 622 aa13.72□□□□□ -0.21
DHFR-201ENST00000439211 MTCP1P56278 107 aa13.72□□□□□ -0.21
DHFR-201ENST00000439211 RTP5Q14D33 572 aa13.72□□□□□ -0.21
DHFR-201ENST00000439211 MRPS17Q9Y2R5 130 aaKnown RBP13.72□□□□□ -0.21
DHFR-201ENST00000439211 KIR2DL5BA0A0G2JN68 375 aa13.72□□□□□ -0.21
DHFR-201ENST00000439211 KIR2DL5BA0A0G2JPC4 375 aa13.72□□□□□ -0.21
DHFR-201ENST00000439211 A0A1B0GUS0 222 aa13.72□□□□□ -0.21
DHFR-201ENST00000439211 CCNOP22674 350 aa13.72□□□□□ -0.21
DHFR-201ENST00000439211 SPEM2Q0P670 501 aa13.72□□□□□ -0.21
DHFR-201ENST00000439211 ARL6IP1Q15041 203 aa13.72□□□□□ -0.21
DHFR-201ENST00000439211 C1orf100Q5SVJ3 147 aa13.72□□□□□ -0.21
DHFR-201ENST00000439211 ZNF695Q8IW36 515 aa13.72□□□□□ -0.21
DHFR-201ENST00000439211 KIR2DL5AQ8N109 375 aa13.72□□□□□ -0.21
DHFR-201ENST00000439211 TMEM170AQ8WVE7 144 aa13.72□□□□□ -0.21
DHFR-201ENST00000439211 NAT8Q9UHE5 227 aa13.72□□□□□ -0.21
DHFR-201ENST00000439211 TRIOBPQ9H2D6 2365 aa13.72□□□□□ -0.21
DHFR-201ENST00000439211 SVILO95425 2214 aa13.72□□□□□ -0.21
DHFR-201ENST00000439211 RAB29O14966 203 aa13.71□□□□□ -0.21
DHFR-201ENST00000439211 HMGB3O15347 200 aaKnown RBP13.71□□□□□ -0.21
DHFR-201ENST00000439211 OR4A47Q6IF82 309 aa13.71□□□□□ -0.21
DHFR-201ENST00000439211 SVIPQ8NHG7 77 aa13.71□□□□□ -0.21
DHFR-201ENST00000439211 PLK3Q9H4B4 646 aa13.71□□□□□ -0.21
DHFR-201ENST00000439211 SLC39A9Q9NUM3 307 aa13.71□□□□□ -0.21
DHFR-201ENST00000439211 TMEM106BQ9NUM4 274 aa13.71□□□□□ -0.21
DHFR-201ENST00000439211 UQCR10Q9UDW1 63 aa13.71□□□□□ -0.21
DHFR-201ENST00000439211 PCNX3Q9H6A9 2034 aa13.71□□□□□ -0.21
DHFR-201ENST00000439211 SZT2Q5T011 3432 aa13.71□□□□□ -0.21
DHFR-201ENST00000439211 GABRA2P47869 451 aa13.71□□□□□ -0.21
DHFR-201ENST00000439211 RSPO4Q2I0M5 234 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms