RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 J3QT63 122 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 ZNF205O95201 554 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 SFTA3P0C7M3 94 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 CLDN20P56880 219 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 GUCA2AQ02747 115 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 PMS2P11Q13670 270 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 MEIG1Q5JSS6 88 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 SLC23A3Q6PIS1 610 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 TEX37Q96LM6 180 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 TMEM204Q9BSN7 226 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 ZNF275Q9NSD4 429 aaPredicted RBP9.85□□□□□ -0.83
SCN4A-201ENST00000435607 OR51B2Q9Y5P1 312 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 MDC1Q14676 2089 aaKnown RBP9.85□□□□□ -0.83
SCN4A-201ENST00000435607 OR4C46A6NHA9 309 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 C17orf51A8MQB3 221 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 FMODQ06828 376 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 PRICKLE4Q2TBC4 344 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 TMEM251Q8N6I4 163 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 SSC4DQ8WTU2 575 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 ALKBH7Q9BT30 221 aaPredicted RBP9.85□□□□□ -0.83
SCN4A-201ENST00000435607 NAA50Q9GZZ1 169 aaKnown RBP9.85□□□□□ -0.83
SCN4A-201ENST00000435607 TINAGQ9UJW2 476 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 PAPPA2Q9BXP8 1791 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 FFAR1O14842 300 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 NPFFO15130 113 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 CFDP00746 253 aaPredicted RBP9.85□□□□□ -0.83
SCN4A-201ENST00000435607 WNT3P56703 355 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 JOSD1Q15040 202 aaPredicted RBP9.85□□□□□ -0.83
SCN4A-201ENST00000435607 VSTM2LQ96N03 204 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 Q9N2K0 584 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 TRAV30A0A087WSZ9 112 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 TMEM272A0A1B0GTI8 110 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 CCR2P41597 374 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 WDR38Q5JTN6 314 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 LHFPL5Q8TAF8 219 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 SPNS1Q9H2V7 528 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 CYB5R1Q9UHQ9 305 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 RNF115Q9Y4L5 304 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 TRBV5-4A0A0C4DH59 114 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 hCG_38984A0A1B0GV85 526 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 OR2W5A6NFC9 320 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 C11orf94C9JXX5 98 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 KLRB1Q12918 225 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 COTL1Q14019 142 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 TEX30Q5JUR7 227 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 CDC42EP3Q9UKI2 254 aa9.85□□□□□ -0.83
SCN4A-201ENST00000435607 IGKV3D-11A0A0A0MRZ8 115 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 B4E171 279 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 LMX1BO60663 402 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 IGKV3-11P04433 115 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 TCTAP57738 103 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 HLA-DRB5Q30154 266 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 OTPQ5XKR4 325 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 ASB10Q8WXI3 467 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 AUNIPQ9H7T9 357 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 RALYQ9UKM9 306 aaKnown RBP9.84□□□□□ -0.83
SCN4A-201ENST00000435607 C4AP0C0L4 1744 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 RPL27AP46776 148 aaKnown RBP9.84□□□□□ -0.83
SCN4A-201ENST00000435607 BPIFA4PQ86YQ2 179 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 TMEM189A5PLL7 270 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 FTH1P19P0C7X4 201 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 APELAP0DMC3 54 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 BTF3P20290 206 aaKnown RBP9.84□□□□□ -0.83
SCN4A-201ENST00000435607 ZNF137PP52743 207 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 SRSF5Q13243 272 aaKnown RBP9.84□□□□□ -0.83
SCN4A-201ENST00000435607 LBHQ53QV2 105 aaPredicted RBP9.84□□□□□ -0.83
SCN4A-201ENST00000435607 UNQ5815/PRO19632Q6UWF5 114 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 RAB24Q969Q5 203 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 ZNF768Q9H5H4 540 aaKnown RBP9.84□□□□□ -0.83
SCN4A-201ENST00000435607 INTS1Q8N201 2190 aaKnown RBP9.84□□□□□ -0.83
SCN4A-201ENST00000435607 SEC16AO15027 2179 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 FAM157CP0CG43 387 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 DYNLT3P51808 116 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 OR2D3Q8NGH3 330 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 RGPD2P0DJD1 1756 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 MIA3Q5JRA6 1907 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 IGHV5-10-1A0A0J9YXX1 117 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 CLLU1Q5K131 121 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 TMEM183AQ8IXX5 376 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 PRELID3AQ96N28 172 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 ZNF253O75346 499 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 CTSSP25774 331 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 NUBP1P53384 320 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 FUNDC1Q8IVP5 155 aa9.84□□□□□ -0.83
SCN4A-201ENST00000435607 IGHV3OR15-7A0A075B7D8 119 aa9.84□□□□□ -0.84
SCN4A-201ENST00000435607 DCAF12L2Q5VW00 463 aa9.84□□□□□ -0.84
SCN4A-201ENST00000435607 SLC35E3Q7Z769 313 aa9.84□□□□□ -0.84
SCN4A-201ENST00000435607 ANGPTL4Q9BY76 406 aa9.84□□□□□ -0.84
SCN4A-201ENST00000435607 LPAR5Q9H1C0 372 aa9.84□□□□□ -0.84
SCN4A-201ENST00000435607 HLA-DRB3P79483 266 aa9.83□□□□□ -0.84
SCN4A-201ENST00000435607 B4GALNT1Q00973 533 aa9.83□□□□□ -0.84
SCN4A-201ENST00000435607 C3AR1Q16581 482 aa9.83□□□□□ -0.84
SCN4A-201ENST00000435607 RNF165Q6ZSG1 346 aa9.83□□□□□ -0.84
SCN4A-201ENST00000435607 TMEM33P57088 247 aa9.83□□□□□ -0.84
SCN4A-201ENST00000435607 RPS20P60866 119 aaKnown RBP9.83□□□□□ -0.84
SCN4A-201ENST00000435607 KLF9Q13886 244 aaPredicted RBP9.83□□□□□ -0.84
SCN4A-201ENST00000435607 ZNF770Q6IQ21 691 aaPredicted RBP9.83□□□□□ -0.84
SCN4A-201ENST00000435607 MARS2Q96GW9 593 aaKnown RBP9.83□□□□□ -0.84
SCN4A-201ENST00000435607 PAXXQ9BUH6 204 aa9.83□□□□□ -0.84
SCN4A-201ENST00000435607 COL25A1Q9BXS0 654 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms