RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 ACTL9Q8TC94 416 aa3.19□□□□□ -1.9
HMGB3-203ENST00000430118 MITD1Q8WV92 249 aa3.19□□□□□ -1.9
HMGB3-203ENST00000430118 ACOT12Q8WYK0 555 aa3.19□□□□□ -1.9
HMGB3-203ENST00000430118 NRGNQ92686 78 aa3.19□□□□□ -1.9
HMGB3-203ENST00000430118 TFGQ92734 400 aaPredicted RBP3.19□□□□□ -1.9
HMGB3-203ENST00000430118 UBE2E3Q969T4 207 aa3.19□□□□□ -1.9
HMGB3-203ENST00000430118 PHYHIPLQ96FC7 376 aa3.19□□□□□ -1.9
HMGB3-203ENST00000430118 FOXN4Q96NZ1 517 aa3.19□□□□□ -1.9
HMGB3-203ENST00000430118 HOPXQ9BPY8 73 aaPredicted RBP3.19□□□□□ -1.9
HMGB3-203ENST00000430118 SEC11CQ9BY50 192 aa3.19□□□□□ -1.9
HMGB3-203ENST00000430118 ANGPTL4Q9BY76 406 aa3.19□□□□□ -1.9
HMGB3-203ENST00000430118 PRRG3Q9BZD7 231 aa3.19□□□□□ -1.9
HMGB3-203ENST00000430118 C20orf27Q9GZN8 174 aa3.19□□□□□ -1.9
HMGB3-203ENST00000430118 PCBD2Q9H0N5 130 aa3.19□□□□□ -1.9
HMGB3-203ENST00000430118 PTGES2Q9H7Z7 377 aa3.19□□□□□ -1.9
HMGB3-203ENST00000430118 TPT1P8Q9HAU6 139 aa3.19□□□□□ -1.9
HMGB3-203ENST00000430118 SMCO4Q9NRQ5 59 aa3.19□□□□□ -1.9
HMGB3-203ENST00000430118 PNO1Q9NRX1 252 aaKnown RBP3.19□□□□□ -1.9
HMGB3-203ENST00000430118 B4GALT7Q9UBV7 327 aa3.19□□□□□ -1.9
HMGB3-203ENST00000430118 NEU3Q9UQ49 428 aa3.19□□□□□ -1.9
HMGB3-203ENST00000430118 ZNF835Q9Y2P0 537 aa3.19□□□□□ -1.9
HMGB3-203ENST00000430118 CDH10Q9Y6N8 788 aa3.19□□□□□ -1.9
HMGB3-203ENST00000430118 CSPG4Q6UVK1 2322 aa3.19□□□□□ -1.9
HMGB3-203ENST00000430118 STAB1Q9NY15 2570 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 DOCK4Q8N1I0 1966 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 NUP210LQ5VU65 1888 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 A0A1B0GX78 115 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 NKX2-6A6NCS4 301 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 PRORSD1PA6NEY8 169 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 RPL37AP8A6NKH3 93 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 COLCA2A8K830 154 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 G3V3Y1 287 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 BHLHE40O14503 412 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 OR10H3O60404 316 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 ICOSLGO75144 302 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 CRLF1O75462 422 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 KBTBD11O94819 623 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 CLIC3O95833 236 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 C1QAP02745 245 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 SERPINA7P05543 415 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 CD2P06729 351 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 GIPP09681 153 aaPredicted RBP3.18□□□□□ -1.9
HMGB3-203ENST00000430118 UBBP0CG47 229 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 UBCP0CG48 685 aaKnown RBP3.18□□□□□ -1.9
HMGB3-203ENST00000430118 C1GALT1C1LP0DN25 315 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 MAGP20916 626 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 LCN1P31025 176 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 RPL22P35268 128 aaKnown RBP3.18□□□□□ -1.9
HMGB3-203ENST00000430118 CD200P41217 278 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 RGRP47804 291 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 SPINT3P49223 89 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 MRPL19P49406 292 aaKnown RBP3.18□□□□□ -1.9
HMGB3-203ENST00000430118 CDC34P49427 236 aaPredicted RBP3.18□□□□□ -1.9
HMGB3-203ENST00000430118 DAP3P51398 398 aaKnown RBP3.18□□□□□ -1.9
HMGB3-203ENST00000430118 DNAJB13P59910 316 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 PPP1CAP62136 330 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 SELENOTP62341 195 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 UBA52P62987 128 aaKnown RBP3.18□□□□□ -1.9
HMGB3-203ENST00000430118 IL5RAQ01344 420 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 CHRNB3Q05901 458 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 TFF3Q07654 80 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 C2orf80Q0P641 193 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 SLC10A1Q14973 349 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 FCN2Q15485 313 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 GUK1Q16774 197 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 BSXQ3C1V8 233 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 SLC25A35Q3KQZ1 300 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 SPIN4Q56A73 249 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 ZC2HC1BQ5TFG8 222 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 MARC1Q5VT66 337 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 TRIQKQ629K1 86 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 ZNF57Q68EA5 555 aaPredicted RBP3.18□□□□□ -1.9
HMGB3-203ENST00000430118 EIF5AL1Q6IS14 154 aaKnown RBP3.18□□□□□ -1.9
HMGB3-203ENST00000430118 ADAM5Q6NVV9 412 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 NDUFAF7Q7L592 441 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 THOC6Q86W42 341 aaKnown RBP3.18□□□□□ -1.9
HMGB3-203ENST00000430118 CDC20BQ86Y33 519 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 BAP18Q8IXM2 172 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 C9orf40Q8IXQ3 194 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 ABHD12Q8N2K0 398 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 MTURNQ8N3F0 131 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 CLDN22Q8N7P3 220 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 PXT1Q8NFP0 134 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 OR11G2Q8NGC1 345 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 OR8J3Q8NGG0 315 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 OR52E4Q8NGH9 312 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 OR10A6Q8NH74 314 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 TERB2Q8NHR7 220 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 RNASEH2CQ8TDP1 164 aaKnown RBP3.18□□□□□ -1.9
HMGB3-203ENST00000430118 GPR151Q8TDV0 419 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 FAM222BQ8WU58 562 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 ST8SIA1Q92185 356 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 ZMYND19Q96E35 227 aaPredicted RBP3.18□□□□□ -1.9
HMGB3-203ENST00000430118 ZBED6CLQ96FA7 236 aaPredicted RBP3.18□□□□□ -1.9
HMGB3-203ENST00000430118 LYSMD1Q96S90 227 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 CNN2Q99439 309 aaKnown RBP3.18□□□□□ -1.9
HMGB3-203ENST00000430118 MCHR1Q99705 422 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 SOSTQ9BQB4 213 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 C7orf50Q9BRJ6 194 aaKnown RBP3.18□□□□□ -1.9
HMGB3-203ENST00000430118 UTP23Q9BRU9 249 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms