RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 B9D2Q9BPU9 175 aa11.76□□□□□ -0.53
MSH5-208ENST00000429846 GON7Q9BXV9 100 aa11.76□□□□□ -0.53
MSH5-208ENST00000429846 METTL9Q9H1A3 318 aa11.76□□□□□ -0.53
MSH5-208ENST00000429846 AMBNQ9NP70 447 aa11.76□□□□□ -0.53
MSH5-208ENST00000429846 TMEM138Q9NPI0 162 aa11.76□□□□□ -0.53
MSH5-208ENST00000429846 LIN7CQ9NUP9 197 aaKnown RBP11.76□□□□□ -0.53
MSH5-208ENST00000429846 TAS2R4Q9NYW5 299 aa11.76□□□□□ -0.53
MSH5-208ENST00000429846 COL7A1Q02388 2944 aa11.75□□□□□ -0.53
MSH5-208ENST00000429846 IGHV1-3A0A0C4DH29 117 aa11.75□□□□□ -0.53
MSH5-208ENST00000429846 TMEM30CPA0ZSE6 113 aa11.75□□□□□ -0.53
MSH5-208ENST00000429846 AP4M1O00189 453 aa11.75□□□□□ -0.53
MSH5-208ENST00000429846 CCRL2O00421 344 aa11.75□□□□□ -0.53
MSH5-208ENST00000429846 IL3RAP26951 378 aa11.75□□□□□ -0.53
MSH5-208ENST00000429846 ZNF93P35789 620 aaPredicted RBP11.75□□□□□ -0.53
MSH5-208ENST00000429846 SOX2P48431 317 aa11.75□□□□□ -0.53
MSH5-208ENST00000429846 CD69Q07108 199 aa11.75□□□□□ -0.53
MSH5-208ENST00000429846 MPV17LQ2QL34 196 aa11.75□□□□□ -0.53
MSH5-208ENST00000429846 C11orf87Q6NUJ2 197 aa11.75□□□□□ -0.53
MSH5-208ENST00000429846 TEX38Q6PEX7 206 aa11.75□□□□□ -0.53
MSH5-208ENST00000429846 UNQ9370/PRO34162Q6UXP9 181 aa11.75□□□□□ -0.53
MSH5-208ENST00000429846 ZNF695Q8IW36 515 aa11.75□□□□□ -0.53
MSH5-208ENST00000429846 OR52I1Q8NGK6 324 aa11.75□□□□□ -0.53
MSH5-208ENST00000429846 OR52N1Q8NH53 320 aa11.75□□□□□ -0.53
MSH5-208ENST00000429846 RGP1Q92546 391 aaPredicted RBP11.75□□□□□ -0.53
MSH5-208ENST00000429846 H0YHG0 523 aa11.74□□□□□ -0.53
MSH5-208ENST00000429846 ORC5O43913 435 aa11.74□□□□□ -0.53
MSH5-208ENST00000429846 CDRT1O95170 752 aa11.74□□□□□ -0.53
MSH5-208ENST00000429846 LIMS3P0CW19 117 aa11.74□□□□□ -0.53
MSH5-208ENST00000429846 LIMS4P0CW20 117 aa11.74□□□□□ -0.53
MSH5-208ENST00000429846 GTF2A1P52655 376 aaPredicted RBP11.74□□□□□ -0.53
MSH5-208ENST00000429846 HNF4GQ14541 408 aa11.74□□□□□ -0.53
MSH5-208ENST00000429846 DDI2Q5TDH0 399 aa11.74□□□□□ -0.53
MSH5-208ENST00000429846 MOB3BQ86TA1 216 aa11.74□□□□□ -0.53
MSH5-208ENST00000429846 Q8N6K4 173 aa11.74□□□□□ -0.53
MSH5-208ENST00000429846 OR2T10Q8NGZ9 312 aa11.74□□□□□ -0.53
MSH5-208ENST00000429846 EAF1Q96JC9 268 aaPredicted RBP11.74□□□□□ -0.53
MSH5-208ENST00000429846 ABCG5Q9H222 651 aa11.74□□□□□ -0.53
MSH5-208ENST00000429846 RAB9BQ9NP90 201 aa11.74□□□□□ -0.53
MSH5-208ENST00000429846 LOC100130705A0A1B0GUX0 176 aa11.73□□□□□ -0.53
MSH5-208ENST00000429846 A0A1W2PPE3 182 aa11.73□□□□□ -0.53
MSH5-208ENST00000429846 C15orf65H3BRN8 121 aa11.73□□□□□ -0.53
MSH5-208ENST00000429846 SDCBPO00560 298 aaPredicted RBP11.73□□□□□ -0.53
MSH5-208ENST00000429846 GEMIN2O14893 280 aaKnown RBP11.73□□□□□ -0.53
MSH5-208ENST00000429846 TXNL1O43396 289 aa11.73□□□□□ -0.53
MSH5-208ENST00000429846 RRP9O43818 475 aaKnown RBP11.73□□□□□ -0.53
MSH5-208ENST00000429846 SERPINA2P20848 420 aa11.73□□□□□ -0.53
MSH5-208ENST00000429846 DCKP27707 260 aa11.73□□□□□ -0.53
MSH5-208ENST00000429846 BDKRB2P30411 391 aa11.73□□□□□ -0.53
MSH5-208ENST00000429846 GPR12P47775 334 aa11.73□□□□□ -0.53
MSH5-208ENST00000429846 TMEM30BQ3MIR4 351 aa11.73□□□□□ -0.53
MSH5-208ENST00000429846 TMPRSS11AQ6ZMR5 421 aa11.73□□□□□ -0.53
MSH5-208ENST00000429846 OR8H1Q8NGG4 311 aa11.73□□□□□ -0.53
MSH5-208ENST00000429846 OR8U1Q8NH10 309 aa11.73□□□□□ -0.53
MSH5-208ENST00000429846 ARL11Q969Q4 196 aa11.73□□□□□ -0.53
MSH5-208ENST00000429846 SPACA1Q9HBV2 294 aa11.73□□□□□ -0.53
MSH5-208ENST00000429846 FGF20Q9NP95 211 aaPredicted RBP11.73□□□□□ -0.53
MSH5-208ENST00000429846 GFOD1Q9NXC2 390 aa11.73□□□□□ -0.53
MSH5-208ENST00000429846 LINC00527Q9UJ94 153 aa11.73□□□□□ -0.53
MSH5-208ENST00000429846 ING4Q9UNL4 249 aa11.73□□□□□ -0.53
MSH5-208ENST00000429846 TRAV39A0A0B4J263 110 aa11.72□□□□□ -0.53
MSH5-208ENST00000429846 IRGMA1A4Y4 181 aa11.72□□□□□ -0.53
MSH5-208ENST00000429846 NCBP2LA6PVI3 153 aaKnown RBP11.72□□□□□ -0.53
MSH5-208ENST00000429846 AIPO00170 330 aa11.72□□□□□ -0.53
MSH5-208ENST00000429846 RAMP3O60896 148 aa11.72□□□□□ -0.53
MSH5-208ENST00000429846 MOSP00540 346 aa11.72□□□□□ -0.53
MSH5-208ENST00000429846 GTF2F2P13984 249 aa11.72□□□□□ -0.53
MSH5-208ENST00000429846 CD1BP29016 333 aa11.72□□□□□ -0.53
MSH5-208ENST00000429846 REG1BP48304 166 aa11.72□□□□□ -0.53
MSH5-208ENST00000429846 DGCR2P98153 550 aa11.72□□□□□ -0.53
MSH5-208ENST00000429846 RIPK1Q13546 671 aa11.72□□□□□ -0.53
MSH5-208ENST00000429846 GPR176Q14439 515 aa11.72□□□□□ -0.53
MSH5-208ENST00000429846 PNLIPRP3Q17RR3 467 aa11.72□□□□□ -0.53
MSH5-208ENST00000429846 CXorf66Q5JRM2 361 aaPredicted RBP11.72□□□□□ -0.53
MSH5-208ENST00000429846 ATAD3CQ5T2N8 411 aa11.72□□□□□ -0.53
MSH5-208ENST00000429846 XAF1Q6GPH4 301 aa11.72□□□□□ -0.53
MSH5-208ENST00000429846 C18orf65Q6ZTR6 163 aa11.72□□□□□ -0.53
MSH5-208ENST00000429846 STX19Q8N4C7 294 aa11.72□□□□□ -0.53
MSH5-208ENST00000429846 Q8N9W7 124 aa11.72□□□□□ -0.53
MSH5-208ENST00000429846 TMEM104Q8NE00 496 aa11.72□□□□□ -0.53
MSH5-208ENST00000429846 NEK7Q8TDX7 302 aa11.72□□□□□ -0.53
MSH5-208ENST00000429846 APH1BQ8WW43 257 aa11.72□□□□□ -0.53
MSH5-208ENST00000429846 RTN4IP1Q8WWV3 396 aaPredicted RBP11.72□□□□□ -0.53
MSH5-208ENST00000429846 ST6GALNAC6Q969X2 333 aa11.72□□□□□ -0.53
MSH5-208ENST00000429846 SMIM19Q96E16 107 aa11.72□□□□□ -0.53
MSH5-208ENST00000429846 WWC2-AS2Q96NR7 200 aa11.72□□□□□ -0.53
MSH5-208ENST00000429846 ZNF581Q9P0T4 197 aa11.72□□□□□ -0.53
MSH5-208ENST00000429846 IGHV3-72A0A0B4J1Y9 119 aa11.71□□□□□ -0.53
MSH5-208ENST00000429846 CCL24O00175 119 aa11.71□□□□□ -0.53
MSH5-208ENST00000429846 ELANEP08246 267 aa11.71□□□□□ -0.53
MSH5-208ENST00000429846 ZNF137PP52743 207 aa11.71□□□□□ -0.53
MSH5-208ENST00000429846 FOXE3Q13461 319 aa11.71□□□□□ -0.53
MSH5-208ENST00000429846 ZNF497Q6ZNH5 498 aa11.71□□□□□ -0.53
MSH5-208ENST00000429846 RNF152Q8N8N0 203 aa11.71□□□□□ -0.53
MSH5-208ENST00000429846 MRPS24Q96EL2 167 aaKnown RBP11.71□□□□□ -0.53
MSH5-208ENST00000429846 RAX2Q96IS3 184 aa11.71□□□□□ -0.53
MSH5-208ENST00000429846 RDH12Q96NR8 316 aa11.71□□□□□ -0.53
MSH5-208ENST00000429846 ZNF184Q99676 751 aaPredicted RBP11.71□□□□□ -0.53
MSH5-208ENST00000429846 SLC29A1Q99808 456 aa11.71□□□□□ -0.53
MSH5-208ENST00000429846 CKLFQ9UBR5 152 aa11.71□□□□□ -0.53
MSH5-208ENST00000429846 ZNF580Q9UK33 172 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms