RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 NOSIPQ9Y314 301 aaKnown RBP10.72□□□□□ -0.69
CDH3-202ENST00000429102 TRAPPC2LH3BP13 241 aa10.71□□□□□ -0.69
CDH3-202ENST00000429102 SOD3P08294 240 aa10.71□□□□□ -0.69
CDH3-202ENST00000429102 EGR1P18146 543 aa10.71□□□□□ -0.69
CDH3-202ENST00000429102 CD200P41217 278 aa10.71□□□□□ -0.69
CDH3-202ENST00000429102 S100A12P80511 92 aa10.71□□□□□ -0.69
CDH3-202ENST00000429102 H3F3AP84243 136 aa10.71□□□□□ -0.69
CDH3-202ENST00000429102 SPSB3Q6PJ21 355 aa10.71□□□□□ -0.69
CDH3-202ENST00000429102 TMPRSS7Q7RTY8 843 aa10.71□□□□□ -0.69
CDH3-202ENST00000429102 CCDC54Q8NEL0 328 aa10.71□□□□□ -0.69
CDH3-202ENST00000429102 PSMF1Q92530 271 aa10.71□□□□□ -0.69
CDH3-202ENST00000429102 SCRT1Q9BWW7 348 aa10.71□□□□□ -0.69
CDH3-202ENST00000429102 ZNF552Q9H707 407 aaPredicted RBP10.71□□□□□ -0.69
CDH3-202ENST00000429102 SLC22A20A6NK97 555 aa10.71□□□□□ -0.69
CDH3-202ENST00000429102 KIAA1324LA8MWY0 1029 aaPredicted RBP10.71□□□□□ -0.69
CDH3-202ENST00000429102 UMODP07911 640 aa10.71□□□□□ -0.69
CDH3-202ENST00000429102 CD55P08174 381 aa10.71□□□□□ -0.69
CDH3-202ENST00000429102 FUT6P51993 359 aa10.71□□□□□ -0.69
CDH3-202ENST00000429102 TMEM222Q9H0R3 208 aa10.71□□□□□ -0.69
CDH3-202ENST00000429102 RPRMQ9NS64 109 aa10.71□□□□□ -0.69
CDH3-202ENST00000429102 STRAPQ9Y3F4 350 aaKnown RBP10.71□□□□□ -0.69
CDH3-202ENST00000429102 ABCA1O95477 2261 aa10.71□□□□□ -0.7
CDH3-202ENST00000429102 SRP19P09132 144 aaKnown RBP10.71□□□□□ -0.7
CDH3-202ENST00000429102 TRGC1P0CF51 173 aa10.71□□□□□ -0.7
CDH3-202ENST00000429102 LINC00205P59089 165 aa10.71□□□□□ -0.7
CDH3-202ENST00000429102 RTP5Q14D33 572 aa10.71□□□□□ -0.7
CDH3-202ENST00000429102 ZNF787Q6DD87 383 aa10.71□□□□□ -0.7
CDH3-202ENST00000429102 CADM4Q8NFZ8 388 aa10.71□□□□□ -0.7
CDH3-202ENST00000429102 TMEM37Q8WXS4 190 aa10.71□□□□□ -0.7
CDH3-202ENST00000429102 SDSLQ96GA7 329 aa10.71□□□□□ -0.7
CDH3-202ENST00000429102 SLC25A31Q9H0C2 315 aa10.71□□□□□ -0.7
CDH3-202ENST00000429102 RNF122Q9H9V4 155 aa10.71□□□□□ -0.7
CDH3-202ENST00000429102 TINAGQ9UJW2 476 aa10.71□□□□□ -0.7
CDH3-202ENST00000429102 HEATR1Q9H583 2144 aaKnown RBP10.71□□□□□ -0.7
CDH3-202ENST00000429102 CPAMD8Q8IZJ3 1885 aa10.71□□□□□ -0.7
CDH3-202ENST00000429102 IFITM10A6NMD0 228 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 RAC1P63000 192 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 ELOBQ15370 118 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 HEPN1Q6WQI6 88 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 TUSC5Q8IXB3 177 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 MKXQ8IYA7 352 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 ZDHHC23Q8IYP9 409 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 FRZBQ92765 325 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 TVP23CQ96ET8 276 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 FAM234AQ9H0X4 552 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 PROK2Q9HC23 129 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 UBE2L5PA0A1B0GUS4 154 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 HIST1H2BKO60814 126 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 RHBDL1O75783 438 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 KRASP01116 189 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 HIST1H2BJP06899 126 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 CA6P23280 308 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 HIST1H2BOP23527 126 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 HIST1H2BBP33778 126 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 ECI1P42126 302 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 CEBPDP49716 269 aaPredicted RBP10.7□□□□□ -0.7
CDH3-202ENST00000429102 HIST1H2BDP58876 126 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 HIST1H2BCP62807 126 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 ICAM4Q14773 271 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 HERPUD1Q15011 391 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 HIST2H2BEQ16778 126 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.7□□□□□ -0.7
CDH3-202ENST00000429102 LYSMD4Q5XG99 296 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 Q6ZRM9 215 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 HIST1H2BHQ93079 126 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 TMEM54Q969K7 222 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 MUCL1Q96DR8 90 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 GALNT14Q96FL9 552 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 FAM210BQ96KR6 192 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 HIST1H2BNQ99877 126 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 HIST1H2BMQ99879 126 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 SMCO3A2RU48 225 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 CD300LBA8K4G0 201 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 IFNL4K9M1U5 179 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 VAMP5O95183 116 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 RTL6Q6ICC9 239 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 FADS6Q8N9I5 356 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 OR4D5Q8NGN0 318 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 TMEM204Q9BSN7 226 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 CABLES2Q9BTV7 478 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 PHF7Q9BWX1 381 aaPredicted RBP10.7□□□□□ -0.7
CDH3-202ENST00000429102 SLC25A22Q9H936 323 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 MTCH1Q9NZJ7 389 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 WASF3Q9UPY6 502 aa10.7□□□□□ -0.7
CDH3-202ENST00000429102 MRPS17Q9Y2R5 130 aaKnown RBP10.7□□□□□ -0.7
CDH3-202ENST00000429102 PINLYPA6NC86 204 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 GALR2O43603 387 aaPredicted RBP10.69□□□□□ -0.7
CDH3-202ENST00000429102 CBR3O75828 277 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 CLDN1O95832 211 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 IGHV2-5P01817 119 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 WDR5BQ86VZ2 330 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 GPR146Q96CH1 333 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 CHD3Q12873 2000 aaKnown RBP10.69□□□□□ -0.7
CDH3-202ENST00000429102 IGLV3-12A0A075B6K2 115 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 A0A1W2PPQ1 181 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 DTYMKP23919 212 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 ZNF816Q0VGE8 651 aaPredicted RBP10.69□□□□□ -0.7
CDH3-202ENST00000429102 KCNMB1Q16558 191 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 KHDC3LQ587J8 217 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 SLC25A53Q5H9E4 307 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms