RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 COMMD7Q86VX2 200 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 LGI3Q8N145 548 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 SLC35G3Q8N808 338 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 BOLLQ8N9W6 283 aaKnown RBP8.78□□□□□ -1
HDAC9-210ENST00000428307 SPERTQ8NA61 448 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 OR4A4PQ8NGN8 299 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 SLX1AQ9BQ83 275 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 HES4Q9HCC6 221 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 TAAR3PQ9P1P4 343 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 PCDHB10Q9UN67 800 aa8.78□□□□□ -1
HDAC9-210ENST00000428307 UBE2J1Q9Y385 318 aaPredicted RBP8.78□□□□□ -1
HDAC9-210ENST00000428307 LSM5Q9Y4Y9 91 aaKnown RBP8.78□□□□□ -1
HDAC9-210ENST00000428307 ZSCAN5BA6NJL1 495 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 GPR31O00270 319 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 MDH2P40926 338 aaKnown RBP8.77□□□□□ -1.01
HDAC9-210ENST00000428307 SPRNQ5BIV9 151 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 TMEM268Q5VZI3 342 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 ACP7Q6ZNF0 438 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 CXorf58Q96LI9 332 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 CNTNAP3BQ96NU0 1288 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 ARPC5LQ9BPX5 153 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 CNTNAP3Q9BZ76 1288 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 TAF9BQ9HBM6 251 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 TREM2Q9NZC2 230 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 METRNQ9UJH8 293 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 OR2W1Q9Y3N9 320 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 SPEF1Q9Y4P9 236 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 CACNA1DQ01668 2161 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 SPRY3O43610 288 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 PET100P0DJ07 73 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 GLRXP35754 106 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 NUP62P37198 522 aaPredicted RBP8.77□□□□□ -1.01
HDAC9-210ENST00000428307 KLF3P57682 345 aaPredicted RBP8.77□□□□□ -1.01
HDAC9-210ENST00000428307 UBA52P62987 128 aaKnown RBP8.77□□□□□ -1.01
HDAC9-210ENST00000428307 CMTM1Q8IZ96 169 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 TPRX1Q8N7U7 411 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 OR52M1Q8NGK5 317 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 LRRC29Q8WV35 223 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 C18orf12Q96KH6 178 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 TMEM222Q9H0R3 208 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 ZC4H2Q9NQZ6 224 aa8.77□□□□□ -1.01
HDAC9-210ENST00000428307 RBM7Q9Y580 266 aaKnown RBP8.77□□□□□ -1.01
HDAC9-210ENST00000428307 KIAA2026Q5HYC2 2103 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 H7C1Q1 480 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 MBPP02686 304 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-210ENST00000428307 ACAA1P09110 424 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-210ENST00000428307 RRASP10301 218 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 ZNF250P15622 560 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 CCKARP32238 428 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 NKX6-1P78426 367 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-210ENST00000428307 C1orf174Q8IYL3 243 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 H1FOOQ8IZA3 346 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-210ENST00000428307 LRTM2Q8N967 370 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 TMEM171Q8WVE6 324 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 OR2V2Q96R30 315 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 USB1Q9BQ65 265 aaKnown RBP8.76□□□□□ -1.01
HDAC9-210ENST00000428307 PARP12Q9H0J9 701 aaKnown RBP8.76□□□□□ -1.01
HDAC9-210ENST00000428307 TLNRD1Q9H1K6 362 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 CHD8Q9HCK8 2581 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 OR2S2Q9NQN1 319 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 GLS2Q9UI32 602 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 KIF25Q9UIL4 384 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 TUBD1Q9UJT1 453 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 FBXO9Q9UK97 447 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-210ENST00000428307 KALRNO60229 2985 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 NBASA2RRP1 2371 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 PLCE1Q9P212 2302 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 C16orf97H3BN30 126 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 I3L521 148 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 PGLYRP1O75594 196 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-210ENST00000428307 IGHV3-13P01766 116 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 LYL1P12980 280 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 CEACAM6P40199 344 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 GABRA2P47869 451 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 COL10A1Q03692 680 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 FAM53AQ6NSI3 398 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-210ENST00000428307 ZNF695Q8IW36 515 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 FAM185AQ8N0U4 392 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 OR51H1Q8NH63 302 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 AUP1Q9Y679 476 aa8.76□□□□□ -1.01
HDAC9-210ENST00000428307 C1QTNF9BB2RNN3 333 aa8.75□□□□□ -1.01
HDAC9-210ENST00000428307 OR8U9P0C7N5 309 aa8.75□□□□□ -1.01
HDAC9-210ENST00000428307 LMO1P25800 156 aa8.75□□□□□ -1.01
HDAC9-210ENST00000428307 CD40P25942 277 aa8.75□□□□□ -1.01
HDAC9-210ENST00000428307 TMPRSS3P57727 454 aa8.75□□□□□ -1.01
HDAC9-210ENST00000428307 SMCO1Q147U7 214 aa8.75□□□□□ -1.01
HDAC9-210ENST00000428307 TESK1Q15569 626 aa8.75□□□□□ -1.01
HDAC9-210ENST00000428307 SMIM21Q3B7S5 101 aa8.75□□□□□ -1.01
HDAC9-210ENST00000428307 CLEC9AQ6UXN8 241 aa8.75□□□□□ -1.01
HDAC9-210ENST00000428307 MRGPRGQ86SM5 289 aa8.75□□□□□ -1.01
HDAC9-210ENST00000428307 WFDC8Q8IUA0 241 aa8.75□□□□□ -1.01
HDAC9-210ENST00000428307 PDZD9Q8IXQ8 264 aa8.75□□□□□ -1.01
HDAC9-210ENST00000428307 OR8U1Q8NH10 309 aa8.75□□□□□ -1.01
HDAC9-210ENST00000428307 CABLES2Q9BTV7 478 aa8.75□□□□□ -1.01
HDAC9-210ENST00000428307 MRPL37Q9BZE1 423 aaKnown RBP8.75□□□□□ -1.01
HDAC9-210ENST00000428307 MBNL3Q9NUK0 354 aaKnown RBP8.75□□□□□ -1.01
HDAC9-210ENST00000428307 ATRXP46100 2492 aa8.75□□□□□ -1.01
HDAC9-210ENST00000428307 NCOR2Q9Y618 2525 aa8.75□□□□□ -1.01
HDAC9-210ENST00000428307 TMEM30CPA0ZSE6 113 aa8.75□□□□□ -1.01
HDAC9-210ENST00000428307 NKX2-6A6NCS4 301 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms